Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 AC153798.1-201ENSMUST00000219942 244 ntBASIC7.78□□□□□ -1.16
Trim39Q9ESN2 Gm46344-201ENSMUST00000220530 887 ntBASIC7.78□□□□□ -1.16
Trim39Q9ESN2 Gm9973-202ENSMUST00000220926 166 ntBASIC7.78□□□□□ -1.16
Trim39Q9ESN2 AC091683.2-201ENSMUST00000222996 1185 ntTSL 3 BASIC7.78□□□□□ -1.16
Trim39Q9ESN2 AC163038.3-201ENSMUST00000223945 558 ntBASIC7.78□□□□□ -1.16
Trim39Q9ESN2 AC140462.1-201ENSMUST00000225776 853 ntBASIC7.78□□□□□ -1.16
Trim39Q9ESN2 AC140393.2-201ENSMUST00000226894 943 ntBASIC7.78□□□□□ -1.16
Trim39Q9ESN2 AC137902.2-201ENSMUST00000227989 576 ntBASIC7.78□□□□□ -1.16
Trim39Q9ESN2 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim39Q9ESN2 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim39Q9ESN2 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim39Q9ESN2 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Trim39Q9ESN2 Olfr1504-201ENSMUST00000078282 1085 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Trim39Q9ESN2 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Trim39Q9ESN2 Btg1-ps2-201ENSMUST00000089060 1194 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim39Q9ESN2 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC7.78□□□□□ -1.16
Trim39Q9ESN2 Lipt1-201ENSMUST00000041621 1485 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim39Q9ESN2 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC7.78□□□□□ -1.16
Trim39Q9ESN2 Gm6982-201ENSMUST00000118752 1560 ntBASIC7.78□□□□□ -1.16
Trim39Q9ESN2 Them7-201ENSMUST00000068813 1556 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim39Q9ESN2 Dppa1-201ENSMUST00000077173 1575 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim39Q9ESN2 Hdlbp-202ENSMUST00000170883 6231 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim39Q9ESN2 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim39Q9ESN2 1110008L16Rik-205ENSMUST00000184766 2250 ntAPPRIS P2 TSL 5 BASIC7.78□□□□□ -1.16
Trim39Q9ESN2 Gm43254-201ENSMUST00000199187 2491 ntBASIC7.78□□□□□ -1.16
Trim39Q9ESN2 Gm28307-201ENSMUST00000190685 2694 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim39Q9ESN2 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim39Q9ESN2 Cwc22-205ENSMUST00000111824 2603 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim39Q9ESN2 Rnf213-203ENSMUST00000172235 2422 ntTSL 5 BASIC7.78□□□□□ -1.16
Trim39Q9ESN2 Plekha8-201ENSMUST00000101385 1838 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trim39Q9ESN2 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC7.78□□□□□ -1.16
Trim39Q9ESN2 Rpusd1-201ENSMUST00000047273 1703 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim39Q9ESN2 Gm5535-208ENSMUST00000210482 1403 ntTSL 5 BASIC7.78□□□□□ -1.16
Trim39Q9ESN2 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trim39Q9ESN2 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC7.77□□□□□ -1.16
Trim39Q9ESN2 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
Trim39Q9ESN2 Prdm14-201ENSMUST00000047577 2564 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
Trim39Q9ESN2 Zfp473-201ENSMUST00000060270 3800 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Gm44550-201ENSMUST00000207311 2058 ntBASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Gm42737-201ENSMUST00000201074 1755 ntBASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
Trim39Q9ESN2 4930488N15Rik-201ENSMUST00000212830 1561 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Uqcc2-202ENSMUST00000118613 426 ntTSL 3 BASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Gm14584-201ENSMUST00000118956 637 ntBASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Gm9050-201ENSMUST00000119501 448 ntBASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Gm15224-201ENSMUST00000120501 388 ntBASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Chn2-209ENSMUST00000146114 1227 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Gm22186-201ENSMUST00000157822 122 ntBASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Gm25266-201ENSMUST00000158521 304 ntBASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Gm23022-201ENSMUST00000158768 180 ntBASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Gm17069-201ENSMUST00000172256 490 ntBASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Gm3654-201ENSMUST00000173038 909 ntBASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Gm20686-201ENSMUST00000175846 535 ntTSL 2 BASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Gm3591-202ENSMUST00000179312 396 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Gm8266-201ENSMUST00000179745 1192 ntBASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Gm26931-201ENSMUST00000182273 609 ntBASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Mir8100-201ENSMUST00000184230 121 ntBASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Gm28586-201ENSMUST00000189857 456 ntBASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Serpinc1-202ENSMUST00000191936 725 ntTSL 3 BASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Gm7897-201ENSMUST00000193981 554 ntBASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Gm35212-201ENSMUST00000196672 606 ntBASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Amd-ps5-201ENSMUST00000198406 989 ntBASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Gm45566-201ENSMUST00000209883 1168 ntBASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Gm19196-202ENSMUST00000210709 321 ntTSL 2 BASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Gm19196-203ENSMUST00000211164 363 ntTSL 2 BASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Gm18040-201ENSMUST00000217922 827 ntBASIC7.77□□□□□ -1.17
Trim39Q9ESN2 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Gm7476-201ENSMUST00000220112 661 ntBASIC7.77□□□□□ -1.17
Trim39Q9ESN2 AC155305.1-201ENSMUST00000222207 319 ntBASIC7.77□□□□□ -1.17
Trim39Q9ESN2 AC156576.1-201ENSMUST00000222315 500 ntTSL 5 BASIC7.77□□□□□ -1.17
Trim39Q9ESN2 AC079644.3-201ENSMUST00000222452 357 ntBASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Taf1b-203ENSMUST00000222710 521 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Gm33115-202ENSMUST00000223487 703 ntTSL 5 BASIC7.77□□□□□ -1.17
Trim39Q9ESN2 AC154849.1-201ENSMUST00000224873 960 ntBASIC7.77□□□□□ -1.17
Trim39Q9ESN2 AC192434.1-201ENSMUST00000225464 390 ntBASIC7.77□□□□□ -1.17
Trim39Q9ESN2 CT030645.3-201ENSMUST00000225483 1022 ntBASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Fam209-201ENSMUST00000029007 698 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Gm4822-201ENSMUST00000077551 479 ntBASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Elobl-202ENSMUST00000082339 300 ntBASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Gm25810-201ENSMUST00000082752 108 ntBASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Gm22422-201ENSMUST00000083060 135 ntBASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Olfr237-ps1-201ENSMUST00000095953 1000 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Trim39Q9ESN2 Nanog-202ENSMUST00000112580 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms