Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Gm42861-201ENSMUST00000199596 634 ntBASIC7.32□□□□□ -1.24
Sf3a3Q9D554 4933439J24Rik-201ENSMUST00000200866 853 ntBASIC7.32□□□□□ -1.24
Sf3a3Q9D554 Gm44148-201ENSMUST00000203718 316 ntTSL 2 BASIC7.32□□□□□ -1.24
Sf3a3Q9D554 AC151904.2-201ENSMUST00000218683 1177 ntBASIC7.32□□□□□ -1.24
Sf3a3Q9D554 Gm18621-201ENSMUST00000222677 679 ntBASIC7.32□□□□□ -1.24
Sf3a3Q9D554 AC163038.1-201ENSMUST00000223632 1142 ntBASIC7.32□□□□□ -1.24
Sf3a3Q9D554 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
Sf3a3Q9D554 Gm8394-201ENSMUST00000079684 952 ntBASIC7.32□□□□□ -1.24
Sf3a3Q9D554 Zfp964-201ENSMUST00000169125 1416 ntTSL 3 BASIC7.32□□□□□ -1.24
Sf3a3Q9D554 Gm43225-201ENSMUST00000201381 1439 ntBASIC7.32□□□□□ -1.24
Sf3a3Q9D554 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Sf3a3Q9D554 Krt39-201ENSMUST00000076948 1449 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Sf3a3Q9D554 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Sf3a3Q9D554 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Sf3a3Q9D554 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Sf3a3Q9D554 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Sf3a3Q9D554 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Sf3a3Q9D554 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Sf3a3Q9D554 Gm15930-201ENSMUST00000156603 2037 ntBASIC7.32□□□□□ -1.24
Sf3a3Q9D554 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Sf3a3Q9D554 Gm3555-201ENSMUST00000160287 1395 ntBASIC7.32□□□□□ -1.24
Sf3a3Q9D554 Vmn2r-ps95-201ENSMUST00000222423 2316 ntBASIC7.32□□□□□ -1.24
Sf3a3Q9D554 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
Sf3a3Q9D554 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Gm43953-201ENSMUST00000203709 2867 ntBASIC7.31□□□□□ -1.24
Sf3a3Q9D554 AC135083.2-201ENSMUST00000228599 1456 ntBASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Sf3a3Q9D554 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Gm11220-201ENSMUST00000118844 475 ntBASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Gm6640-201ENSMUST00000120629 1587 ntBASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Gm8682-201ENSMUST00000121310 498 ntBASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Gm12754-201ENSMUST00000121908 454 ntBASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Gm14332-201ENSMUST00000121982 899 ntBASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Gm15416-201ENSMUST00000131080 442 ntTSL 3 BASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Chn2-209ENSMUST00000146114 1227 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Gm20491-201ENSMUST00000173765 1241 ntBASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Ighv6-4-201ENSMUST00000177949 297 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Gm6100-201ENSMUST00000180253 403 ntBASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Gm3142-201ENSMUST00000190107 414 ntBASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Tmem265-202ENSMUST00000190278 587 ntTSL 3 BASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Gm37319-201ENSMUST00000193500 636 ntBASIC7.31□□□□□ -1.24
Sf3a3Q9D554 5430433H01Rik-201ENSMUST00000193978 542 ntBASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Gm37349-201ENSMUST00000194205 624 ntBASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Gm37371-201ENSMUST00000194837 392 ntBASIC7.31□□□□□ -1.24
Sf3a3Q9D554 4930553I04Rik-201ENSMUST00000196722 670 ntBASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Gm43607-201ENSMUST00000199524 336 ntTSL 3 BASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Gm16273-201ENSMUST00000202238 268 ntBASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Gm45155-201ENSMUST00000207365 596 ntTSL 2 BASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Gm44785-201ENSMUST00000207379 620 ntTSL 5 BASIC7.31□□□□□ -1.24
Sf3a3Q9D554 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC7.31□□□□□ -1.24
Sf3a3Q9D554 AC108846.3-201ENSMUST00000214078 247 ntTSL 5 BASIC7.31□□□□□ -1.24
Sf3a3Q9D554 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Olfr131-204ENSMUST00000216523 1714 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Gm18024-201ENSMUST00000218516 690 ntBASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Sf3a3Q9D554 AC146596.1-201ENSMUST00000223507 223 ntBASIC7.31□□□□□ -1.24
Sf3a3Q9D554 AC132468.1-201ENSMUST00000224706 499 ntBASIC7.31□□□□□ -1.24
Sf3a3Q9D554 AC126549.1-201ENSMUST00000225044 3687 ntBASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Fxyd5-201ENSMUST00000009831 803 ntAPPRIS ALT2 TSL 3 BASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Olfr1055-201ENSMUST00000099894 1182 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Sept14-201ENSMUST00000042266 1381 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Sf3a3Q9D554 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Sf3a3Q9D554 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Sf3a3Q9D554 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Sf3a3Q9D554 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Sf3a3Q9D554 AC160863.4-201ENSMUST00000218099 1334 ntTSL 5 BASIC7.3□□□□□ -1.24
Sf3a3Q9D554 Gm18310-201ENSMUST00000206494 3912 ntBASIC7.3□□□□□ -1.24
Sf3a3Q9D554 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC7.3□□□□□ -1.24
Sf3a3Q9D554 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Sf3a3Q9D554 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Sf3a3Q9D554 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Sf3a3Q9D554 Gm42940-201ENSMUST00000200361 2362 ntBASIC7.3□□□□□ -1.24
Sf3a3Q9D554 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC7.3□□□□□ -1.24
Sf3a3Q9D554 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Sf3a3Q9D554 Gm16221-201ENSMUST00000117331 393 ntBASIC7.3□□□□□ -1.24
Sf3a3Q9D554 Rps6-ps3-201ENSMUST00000118010 750 ntBASIC7.3□□□□□ -1.24
Sf3a3Q9D554 Rps6-ps4-201ENSMUST00000118499 750 ntBASIC7.3□□□□□ -1.24
Sf3a3Q9D554 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC7.3□□□□□ -1.24
Sf3a3Q9D554 Gm6292-201ENSMUST00000120712 1095 ntBASIC7.3□□□□□ -1.24
Sf3a3Q9D554 Gm8172-201ENSMUST00000120762 750 ntBASIC7.3□□□□□ -1.24
Sf3a3Q9D554 Gm14749-201ENSMUST00000121269 333 ntBASIC7.3□□□□□ -1.24
Sf3a3Q9D554 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC7.3□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms