Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Gm6451-201ENSMUST00000121488 717 ntBASIC8.68□□□□□ -1.02
StrcQ8VIM6 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC8.68□□□□□ -1.02
StrcQ8VIM6 Gpatch2-206ENSMUST00000160471 3841 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
StrcQ8VIM6 Gm11107-201ENSMUST00000165414 505 ntBASIC8.68□□□□□ -1.02
StrcQ8VIM6 Gm26557-201ENSMUST00000180756 493 ntBASIC8.68□□□□□ -1.02
StrcQ8VIM6 Gm28952-201ENSMUST00000189285 681 ntBASIC8.68□□□□□ -1.02
StrcQ8VIM6 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC8.68□□□□□ -1.02
StrcQ8VIM6 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC8.68□□□□□ -1.02
StrcQ8VIM6 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC8.68□□□□□ -1.02
StrcQ8VIM6 Gm18995-201ENSMUST00000202981 520 ntBASIC8.68□□□□□ -1.02
StrcQ8VIM6 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC8.68□□□□□ -1.02
StrcQ8VIM6 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
StrcQ8VIM6 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
StrcQ8VIM6 Egf-202ENSMUST00000197079 3346 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
StrcQ8VIM6 Ms4a6b-205ENSMUST00000163078 2680 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
StrcQ8VIM6 Cep95-201ENSMUST00000018516 2696 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
StrcQ8VIM6 Adgrd1-203ENSMUST00000156437 4141 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
StrcQ8VIM6 Hipk2-207ENSMUST00000162359 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
StrcQ8VIM6 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
StrcQ8VIM6 Gm14035-201ENSMUST00000117596 1475 ntBASIC8.67□□□□□ -1.02
StrcQ8VIM6 Gm43128-201ENSMUST00000202212 1621 ntBASIC8.67□□□□□ -1.02
StrcQ8VIM6 Abca8a-201ENSMUST00000046223 5614 ntAPPRIS P2 TSL 5 BASIC8.67□□□□□ -1.02
StrcQ8VIM6 Arhgef9-210ENSMUST00000182001 4622 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
StrcQ8VIM6 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
StrcQ8VIM6 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
StrcQ8VIM6 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC8.67□□□□□ -1.02
StrcQ8VIM6 Gm11462-201ENSMUST00000117749 562 ntBASIC8.67□□□□□ -1.02
StrcQ8VIM6 Gm5390-201ENSMUST00000119069 1230 ntBASIC8.67□□□□□ -1.02
StrcQ8VIM6 Gm12319-201ENSMUST00000131642 357 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
StrcQ8VIM6 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
StrcQ8VIM6 Gm20454-201ENSMUST00000172713 221 ntBASIC8.67□□□□□ -1.02
StrcQ8VIM6 Gm25574-201ENSMUST00000175245 249 ntBASIC8.67□□□□□ -1.02
StrcQ8VIM6 Gm27348-201ENSMUST00000184511 170 ntBASIC8.67□□□□□ -1.02
StrcQ8VIM6 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC8.67□□□□□ -1.02
StrcQ8VIM6 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC8.67□□□□□ -1.02
StrcQ8VIM6 Gm7441-201ENSMUST00000220697 1074 ntBASIC8.67□□□□□ -1.02
StrcQ8VIM6 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC8.67□□□□□ -1.02
StrcQ8VIM6 Rnase6-202ENSMUST00000226194 2452 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
StrcQ8VIM6 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
StrcQ8VIM6 Gm21731-201ENSMUST00000079524 489 ntBASIC8.67□□□□□ -1.02
StrcQ8VIM6 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
StrcQ8VIM6 Fam161b-202ENSMUST00000065536 3000 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
StrcQ8VIM6 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
StrcQ8VIM6 Adgrl3-213ENSMUST00000120292 5026 ntTSL 5 BASIC8.67□□□□□ -1.02
StrcQ8VIM6 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
StrcQ8VIM6 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC8.67□□□□□ -1.02
StrcQ8VIM6 AC155710.1-201ENSMUST00000219913 1353 ntBASIC8.67□□□□□ -1.02
StrcQ8VIM6 Fbxw10-201ENSMUST00000036085 3354 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
StrcQ8VIM6 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
StrcQ8VIM6 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
StrcQ8VIM6 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
StrcQ8VIM6 Gm11590-201ENSMUST00000118999 1455 ntBASIC8.67□□□□□ -1.02
StrcQ8VIM6 Tacc2-203ENSMUST00000084513 9029 ntAPPRIS P4 TSL 5 BASIC8.67□□□□□ -1.02
StrcQ8VIM6 AC117608.1-201ENSMUST00000225500 3418 ntBASIC8.67□□□□□ -1.02
StrcQ8VIM6 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC8.67□□□□□ -1.02
StrcQ8VIM6 AC158622.2-201ENSMUST00000217363 2552 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
StrcQ8VIM6 Aebp1-201ENSMUST00000102923 3831 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
StrcQ8VIM6 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
StrcQ8VIM6 Dopey2-207ENSMUST00000227156 7340 ntBASIC8.66□□□□□ -1.02
StrcQ8VIM6 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
StrcQ8VIM6 Gm15203-201ENSMUST00000117668 455 ntBASIC8.66□□□□□ -1.02
StrcQ8VIM6 Gm26729-201ENSMUST00000180744 352 ntBASIC8.66□□□□□ -1.02
StrcQ8VIM6 Gm27295-201ENSMUST00000184264 153 ntBASIC8.66□□□□□ -1.02
StrcQ8VIM6 Mir7037-201ENSMUST00000184414 65 ntBASIC8.66□□□□□ -1.02
StrcQ8VIM6 Gm35108-201ENSMUST00000194321 699 ntBASIC8.66□□□□□ -1.02
StrcQ8VIM6 Gm33191-201ENSMUST00000195604 699 ntBASIC8.66□□□□□ -1.02
StrcQ8VIM6 Gm43392-201ENSMUST00000196560 434 ntBASIC8.66□□□□□ -1.02
StrcQ8VIM6 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC8.66□□□□□ -1.02
StrcQ8VIM6 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC8.66□□□□□ -1.02
StrcQ8VIM6 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC8.66□□□□□ -1.02
StrcQ8VIM6 Gm5831-201ENSMUST00000216016 1209 ntBASIC8.66□□□□□ -1.02
StrcQ8VIM6 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC8.66□□□□□ -1.02
StrcQ8VIM6 Gm6575-201ENSMUST00000222946 697 ntBASIC8.66□□□□□ -1.02
StrcQ8VIM6 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
StrcQ8VIM6 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
StrcQ8VIM6 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
StrcQ8VIM6 Gm16153-201ENSMUST00000132184 4118 ntTSL 5 BASIC8.66□□□□□ -1.02
StrcQ8VIM6 Gm34730-201ENSMUST00000210674 4077 ntTSL 5 BASIC8.66□□□□□ -1.02
StrcQ8VIM6 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC8.66□□□□□ -1.02
StrcQ8VIM6 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
StrcQ8VIM6 Dusp27-202ENSMUST00000192369 4045 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
StrcQ8VIM6 Zfp37-201ENSMUST00000068822 3494 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
StrcQ8VIM6 Olfr1357-201ENSMUST00000095473 1826 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
StrcQ8VIM6 Gm42444-201ENSMUST00000199366 4558 ntBASIC8.66□□□□□ -1.02
StrcQ8VIM6 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
StrcQ8VIM6 Adgrf4-204ENSMUST00000170723 2751 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
StrcQ8VIM6 Ccnd2-201ENSMUST00000000188 6330 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
StrcQ8VIM6 Slco6b1-202ENSMUST00000178359 1778 ntBASIC8.66□□□□□ -1.02
StrcQ8VIM6 Fate1-202ENSMUST00000114569 1053 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
StrcQ8VIM6 Gm13430-201ENSMUST00000121366 288 ntBASIC8.66□□□□□ -1.02
StrcQ8VIM6 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
StrcQ8VIM6 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC8.66□□□□□ -1.02
StrcQ8VIM6 Gm22655-201ENSMUST00000174949 96 ntBASIC8.66□□□□□ -1.02
StrcQ8VIM6 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC8.66□□□□□ -1.02
StrcQ8VIM6 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
StrcQ8VIM6 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
StrcQ8VIM6 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
StrcQ8VIM6 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
StrcQ8VIM6 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
StrcQ8VIM6 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 102.9 ms