Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC8.78□□□□□ -1
Nup88Q8CEC0 Gm42549-201ENSMUST00000202392 7004 ntBASIC8.78□□□□□ -1
Nup88Q8CEC0 Zc4h2-201ENSMUST00000044382 2219 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Nup88Q8CEC0 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC8.78□□□□□ -1
Nup88Q8CEC0 Kyat3-202ENSMUST00000106218 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Nup88Q8CEC0 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC8.78□□□□□ -1
Nup88Q8CEC0 Muc5ac-202ENSMUST00000155534 10752 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Nup88Q8CEC0 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Nup88Q8CEC0 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Nup88Q8CEC0 Nrxn3-210ENSMUST00000167887 3303 ntTSL 5 BASIC8.77□□□□□ -1
Nup88Q8CEC0 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Gm17083-201ENSMUST00000165849 1366 ntBASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Lpcat2b-201ENSMUST00000166599 2782 ntAPPRIS P1 TSL 3 BASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Gm7337-202ENSMUST00000181439 2655 ntBASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Gm24195-201ENSMUST00000116804 137 ntBASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Gm12632-201ENSMUST00000121223 495 ntBASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Cd48-201ENSMUST00000015499 922 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Mir1981-201ENSMUST00000157934 82 ntBASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Il21-202ENSMUST00000161015 529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Gm23639-201ENSMUST00000175078 132 ntBASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Gm9556-201ENSMUST00000182938 940 ntBASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Gm28869-201ENSMUST00000187199 811 ntTSL 3 BASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Gm43226-201ENSMUST00000202438 259 ntBASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Gm43812-202ENSMUST00000202701 581 ntBASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Gm4605-201ENSMUST00000203148 625 ntBASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Gm19092-201ENSMUST00000209036 969 ntBASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Gm18503-201ENSMUST00000220340 728 ntBASIC8.77□□□□□ -1.01
Nup88Q8CEC0 CT009550.2-201ENSMUST00000228851 399 ntBASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Gm14373-201ENSMUST00000122467 2158 ntBASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Gm29660-201ENSMUST00000185631 2166 ntTSL 5 BASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Gm29309-201ENSMUST00000186251 2166 ntTSL 5 BASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Gm28317-201ENSMUST00000187200 2166 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Gm28254-201ENSMUST00000189207 2166 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Gm29063-201ENSMUST00000190236 2166 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Gm29632-201ENSMUST00000190335 2166 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Olfr1212-202ENSMUST00000215781 3636 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Nup88Q8CEC0 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Nup88Q8CEC0 Gm6820-201ENSMUST00000188803 2173 ntBASIC8.76□□□□□ -1.01
Nup88Q8CEC0 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Nup88Q8CEC0 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC8.76□□□□□ -1.01
Nup88Q8CEC0 Bmx-202ENSMUST00000112265 3005 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Nup88Q8CEC0 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Nup88Q8CEC0 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Nup88Q8CEC0 Zfp85os-201ENSMUST00000049518 2624 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Nup88Q8CEC0 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Nup88Q8CEC0 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Nup88Q8CEC0 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Nup88Q8CEC0 Olfr1278-205ENSMUST00000215210 6901 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Nup88Q8CEC0 Mir669e-201ENSMUST00000117003 119 ntBASIC8.76□□□□□ -1.01
Nup88Q8CEC0 Gm13463-201ENSMUST00000119020 233 ntBASIC8.76□□□□□ -1.01
Nup88Q8CEC0 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Nup88Q8CEC0 AW495222-202ENSMUST00000149839 868 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Nup88Q8CEC0 Gm10012-202ENSMUST00000170379 372 ntBASIC8.76□□□□□ -1.01
Nup88Q8CEC0 Gm9423-201ENSMUST00000183173 997 ntBASIC8.76□□□□□ -1.01
Nup88Q8CEC0 Gm28622-201ENSMUST00000189842 507 ntTSL 5 BASIC8.76□□□□□ -1.01
Nup88Q8CEC0 Gm38203-201ENSMUST00000191815 245 ntBASIC8.76□□□□□ -1.01
Nup88Q8CEC0 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC8.76□□□□□ -1.01
Nup88Q8CEC0 Gm19211-201ENSMUST00000200251 1206 ntBASIC8.76□□□□□ -1.01
Nup88Q8CEC0 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC8.76□□□□□ -1.01
Nup88Q8CEC0 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC8.76□□□□□ -1.01
Nup88Q8CEC0 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Nup88Q8CEC0 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC8.76□□□□□ -1.01
Nup88Q8CEC0 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC8.76□□□□□ -1.01
Nup88Q8CEC0 Gm46317-201ENSMUST00000221103 393 ntBASIC8.76□□□□□ -1.01
Nup88Q8CEC0 AC122937.2-201ENSMUST00000228258 1051 ntBASIC8.76□□□□□ -1.01
Nup88Q8CEC0 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Nup88Q8CEC0 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Nup88Q8CEC0 Gm37906-201ENSMUST00000192050 3035 ntBASIC8.76□□□□□ -1.01
Nup88Q8CEC0 Gm43769-201ENSMUST00000201871 4323 ntBASIC8.76□□□□□ -1.01
Nup88Q8CEC0 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC8.76□□□□□ -1.01
Nup88Q8CEC0 Zfp882-201ENSMUST00000110002 3152 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Nup88Q8CEC0 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Nup88Q8CEC0 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Nup88Q8CEC0 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Nup88Q8CEC0 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms