Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Lrif1Q8CDD9 Gm14546-201ENSMUST00000138275 1647 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Lrif1Q8CDD9 Gm43339-201ENSMUST00000200032 1606 ntBASIC7.33□□□□□ -1.24
Lrif1Q8CDD9 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Lrif1Q8CDD9 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Lrif1Q8CDD9 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Lrif1Q8CDD9 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
Lrif1Q8CDD9 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 AC159264.1-201ENSMUST00000224844 4257 ntBASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 Ighj1-201ENSMUST00000103430 53 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 Gm24071-201ENSMUST00000104520 132 ntBASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 Gm13929-201ENSMUST00000117553 1125 ntBASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 Gm11474-201ENSMUST00000120814 277 ntBASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 Gm5931-201ENSMUST00000121308 477 ntBASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 Anp32b-ps1-201ENSMUST00000122215 758 ntBASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 S100a10-203ENSMUST00000170612 477 ntAPPRIS P1 TSL 3 BASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 Gm27187-202ENSMUST00000184873 606 ntTSL 3 BASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 Gm26672-203ENSMUST00000192501 756 ntTSL 3 BASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 Mir7230-201ENSMUST00000195977 56 ntBASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 Gm44471-201ENSMUST00000197963 100 ntBASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 4933439J24Rik-201ENSMUST00000200866 853 ntBASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 Gm45782-201ENSMUST00000212670 366 ntBASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 Gm18972-201ENSMUST00000218873 630 ntBASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 AC164424.3-201ENSMUST00000220809 148 ntBASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 Gm4804-203ENSMUST00000222542 577 ntTSL 3 BASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 AC166358.8-201ENSMUST00000223288 105 ntBASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 AC124739.1-201ENSMUST00000223433 148 ntBASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 AC107452.2-201ENSMUST00000228415 363 ntBASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 Gm14762-201ENSMUST00000105109 1771 ntBASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 Cd200r4-203ENSMUST00000176819 1796 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 Fam49a-205ENSMUST00000223061 1782 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 Gm44863-201ENSMUST00000207613 1422 ntBASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 Gm43158-201ENSMUST00000198484 1555 ntBASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Lrif1Q8CDD9 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 4932414J04Rik-201ENSMUST00000152483 3059 ntTSL 2 BASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 AC154141.1-201ENSMUST00000208403 4136 ntBASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 Gm45251-201ENSMUST00000209486 1465 ntBASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 AI506816-205ENSMUST00000199941 2804 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 Pecam1-201ENSMUST00000068021 2977 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 Gm7091-201ENSMUST00000116438 586 ntBASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 Gm15186-201ENSMUST00000119345 563 ntBASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 Gm12611-201ENSMUST00000119452 1037 ntBASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 Gm11259-201ENSMUST00000120554 715 ntBASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 Defa-ps10-201ENSMUST00000121649 171 ntBASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 Gm1947-201ENSMUST00000122451 910 ntBASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 Rbx1-ps-201ENSMUST00000173786 327 ntBASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 Gm22119-201ENSMUST00000175594 99 ntBASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 Gm15251-201ENSMUST00000177947 883 ntBASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 Gm26812-201ENSMUST00000181647 328 ntTSL 3 BASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 Gm26784-201ENSMUST00000181666 410 ntBASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 Gm8304-201ENSMUST00000185744 584 ntBASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 Gm22149-202ENSMUST00000196259 137 ntBASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 Gm42558-201ENSMUST00000200982 265 ntBASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 Gm9354-201ENSMUST00000209075 468 ntBASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 Gm6909-201ENSMUST00000209825 989 ntBASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 Gm4977-201ENSMUST00000215709 1262 ntBASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 Slc25a5-ps-203ENSMUST00000223928 1442 ntBASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 1700123O20Rik-203ENSMUST00000227269 893 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 Pcp4-201ENSMUST00000061739 641 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Lrif1Q8CDD9 AC122346.1-201ENSMUST00000225266 3732 ntBASIC7.31□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms