Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm14802-201ENSMUST00000121944 1885 ntBASIC8.77□□□□□ -1.01
Vps53Q8CCB4 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Vps53Q8CCB4 Musk-208ENSMUST00000179951 3376 ntTSL 5 BASIC8.77□□□□□ -1.01
Vps53Q8CCB4 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Vps53Q8CCB4 Crnn-203ENSMUST00000195515 1863 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Vps53Q8CCB4 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC8.77□□□□□ -1.01
Vps53Q8CCB4 Slc22a26-201ENSMUST00000065634 2007 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Vps53Q8CCB4 Gimap6-202ENSMUST00000119315 3179 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Vps53Q8CCB4 E430024I08Rik-202ENSMUST00000220632 1513 ntTSL 5 BASIC8.77□□□□□ -1.01
Vps53Q8CCB4 Trav9-2-201ENSMUST00000103654 563 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Vps53Q8CCB4 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Vps53Q8CCB4 Gm12024-201ENSMUST00000118819 1253 ntBASIC8.77□□□□□ -1.01
Vps53Q8CCB4 Gm23663-201ENSMUST00000158045 80 ntBASIC8.77□□□□□ -1.01
Vps53Q8CCB4 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC8.77□□□□□ -1.01
Vps53Q8CCB4 Gm21430-201ENSMUST00000182998 998 ntBASIC8.77□□□□□ -1.01
Vps53Q8CCB4 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Vps53Q8CCB4 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC8.77□□□□□ -1.01
Vps53Q8CCB4 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Vps53Q8CCB4 Gm19161-201ENSMUST00000217958 737 ntBASIC8.77□□□□□ -1.01
Vps53Q8CCB4 AC139209.2-201ENSMUST00000227680 1208 ntBASIC8.77□□□□□ -1.01
Vps53Q8CCB4 Ndufa7-201ENSMUST00000048249 508 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Vps53Q8CCB4 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Vps53Q8CCB4 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Vps53Q8CCB4 Dppa2-201ENSMUST00000097175 1948 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Vps53Q8CCB4 Prkaa1-202ENSMUST00000228218 4618 ntBASIC8.77□□□□□ -1.01
Vps53Q8CCB4 Gm43331-201ENSMUST00000197991 1689 ntBASIC8.77□□□□□ -1.01
Vps53Q8CCB4 Gm16427-201ENSMUST00000179091 1449 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
Vps53Q8CCB4 Crbn-202ENSMUST00000113239 2084 ntAPPRIS P4 TSL 1 (best) BASIC8.77□□□□□ -1.01
Vps53Q8CCB4 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
Vps53Q8CCB4 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Vps53Q8CCB4 Gm43158-201ENSMUST00000198484 1555 ntBASIC8.77□□□□□ -1.01
Vps53Q8CCB4 Atf2-201ENSMUST00000055833 4210 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Vps53Q8CCB4 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Vps53Q8CCB4 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Vps53Q8CCB4 Tmem30c-201ENSMUST00000023434 2973 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Vps53Q8CCB4 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Vps53Q8CCB4 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Vps53Q8CCB4 AC166159.1-201ENSMUST00000227154 1380 ntBASIC8.76□□□□□ -1.01
Vps53Q8CCB4 A730049H05Rik-201ENSMUST00000057977 2239 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Vps53Q8CCB4 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Vps53Q8CCB4 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Vps53Q8CCB4 Gm7337-202ENSMUST00000181439 2655 ntBASIC8.76□□□□□ -1.01
Vps53Q8CCB4 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC8.76□□□□□ -1.01
Vps53Q8CCB4 AC165260.6-202ENSMUST00000224959 1958 ntBASIC8.76□□□□□ -1.01
Vps53Q8CCB4 Gm14746-201ENSMUST00000120309 741 ntBASIC8.76□□□□□ -1.01
Vps53Q8CCB4 Gm13877-201ENSMUST00000120614 417 ntBASIC8.76□□□□□ -1.01
Vps53Q8CCB4 Gm5578-201ENSMUST00000121490 1236 ntBASIC8.76□□□□□ -1.01
Vps53Q8CCB4 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Vps53Q8CCB4 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Vps53Q8CCB4 Fbxl12-210ENSMUST00000155301 476 ntTSL 3 BASIC8.76□□□□□ -1.01
Vps53Q8CCB4 Gm21293-201ENSMUST00000170919 864 ntTSL 5 BASIC8.76□□□□□ -1.01
Vps53Q8CCB4 Gm5283-201ENSMUST00000177874 334 ntBASIC8.76□□□□□ -1.01
Vps53Q8CCB4 Gm4259-201ENSMUST00000206489 758 ntBASIC8.76□□□□□ -1.01
Vps53Q8CCB4 CT025685.1-201ENSMUST00000213716 150 ntBASIC8.76□□□□□ -1.01
Vps53Q8CCB4 AC134869.2-201ENSMUST00000225788 421 ntBASIC8.76□□□□□ -1.01
Vps53Q8CCB4 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Vps53Q8CCB4 Serpina3a-203ENSMUST00000185595 1720 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Vps53Q8CCB4 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC8.76□□□□□ -1.01
Vps53Q8CCB4 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
Vps53Q8CCB4 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC8.76□□□□□ -1.01
Vps53Q8CCB4 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Vps53Q8CCB4 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Vps53Q8CCB4 AC153729.1-201ENSMUST00000214055 2562 ntBASIC8.75□□□□□ -1.01
Vps53Q8CCB4 B230118H07Rik-203ENSMUST00000111231 2273 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC8.75□□□□□ -1.01
Vps53Q8CCB4 CT010505.3-201ENSMUST00000227835 1651 ntBASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Il15ra-217ENSMUST00000148748 1542 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Efl1-206ENSMUST00000207868 1537 ntTSL 3 BASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Zfp85os-201ENSMUST00000049518 2624 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Cfap57-201ENSMUST00000071972 4020 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Nsun7-201ENSMUST00000031109 2345 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Nt5c2-201ENSMUST00000086961 3745 ntTSL 5 BASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Anxa9-201ENSMUST00000015846 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Gm12608-201ENSMUST00000122013 1715 ntBASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Uqcrq-202ENSMUST00000109019 504 ntTSL 2 BASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Gm11926-201ENSMUST00000118520 430 ntBASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Gm15763-201ENSMUST00000120136 403 ntBASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Gm12632-201ENSMUST00000121223 495 ntBASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Gm12371-201ENSMUST00000144029 1091 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Gm18254-201ENSMUST00000185699 1204 ntBASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Gm29435-201ENSMUST00000191310 689 ntBASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Ighv5-5-201ENSMUST00000193826 329 ntBASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Ighv1-21-201ENSMUST00000194856 351 ntBASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Gm26413-201ENSMUST00000196783 126 ntBASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Gm43203-201ENSMUST00000200130 558 ntBASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Gm43928-201ENSMUST00000203737 409 ntBASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Gm44147-201ENSMUST00000204658 94 ntBASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Gm45299-201ENSMUST00000210199 420 ntBASIC8.75□□□□□ -1.01
Vps53Q8CCB4 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC8.75□□□□□ -1.01
Vps53Q8CCB4 AC129323.1-201ENSMUST00000216733 470 ntBASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Vps53Q8CCB4 AC130673.1-201ENSMUST00000227992 435 ntBASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Vps53Q8CCB4 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Vps53Q8CCB4 C87499-201ENSMUST00000053304 1901 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 853.6 ms