Protein–RNA interactions for Protein: Q6VGS5

Ccdc88c, Protein Daple, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88cQ6VGS5 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Ccdc88cQ6VGS5 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Ccdc88cQ6VGS5 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Ccdc88cQ6VGS5 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Gm23657-201ENSMUST00000122623 294 ntBASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Zfp572-202ENSMUST00000184208 1078 ntBASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Gm27185-201ENSMUST00000184296 247 ntBASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Gm18995-201ENSMUST00000202981 520 ntBASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Sbf2-201ENSMUST00000033058 7154 ntAPPRIS P2 TSL 5 BASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Prr15l-204ENSMUST00000107636 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Cyp2c44-202ENSMUST00000211830 1557 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Kidins220-210ENSMUST00000222941 6277 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Gm37535-201ENSMUST00000194442 2365 ntBASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Gm37496-201ENSMUST00000191930 2509 ntBASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Gprin3-201ENSMUST00000051065 8339 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Star-201ENSMUST00000033979 4046 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Gm45767-201ENSMUST00000212778 4561 ntBASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Gm25593-201ENSMUST00000102272 96 ntBASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Gm13260-201ENSMUST00000117797 1264 ntBASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Gm14727-201ENSMUST00000118526 525 ntBASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Gm16056-201ENSMUST00000119293 135 ntBASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Gm14721-201ENSMUST00000121381 525 ntBASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Gm7420-201ENSMUST00000162836 842 ntBASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Gm6472-202ENSMUST00000187973 582 ntBASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Gm18690-201ENSMUST00000204488 985 ntBASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 AC127224.1-201ENSMUST00000218094 453 ntBASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 AC134913.1-201ENSMUST00000224563 504 ntBASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 AC154361.1-201ENSMUST00000225694 745 ntBASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Gm9800-201ENSMUST00000052615 336 ntBASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Gm25189-201ENSMUST00000083911 164 ntBASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC8.17□□□□□ -1.1
Ccdc88cQ6VGS5 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc88cQ6VGS5 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc88cQ6VGS5 Pdgfd-201ENSMUST00000058692 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc88cQ6VGS5 AC166574.5-201ENSMUST00000227438 1432 ntBASIC8.16□□□□□ -1.1
Ccdc88cQ6VGS5 Kdsr-201ENSMUST00000010049 5518 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc88cQ6VGS5 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc88cQ6VGS5 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc88cQ6VGS5 CT025619.3-201ENSMUST00000216299 3267 ntBASIC8.16□□□□□ -1.1
Ccdc88cQ6VGS5 Fam114a1-201ENSMUST00000031080 2938 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc88cQ6VGS5 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
Ccdc88cQ6VGS5 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
Ccdc88cQ6VGS5 Pcbp2-202ENSMUST00000078404 2829 ntTSL 2 BASIC8.16□□□□□ -1.1
Ccdc88cQ6VGS5 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc88cQ6VGS5 Gm26645-201ENSMUST00000181076 1316 ntBASIC8.16□□□□□ -1.1
Ccdc88cQ6VGS5 Clca3a2-201ENSMUST00000029929 3654 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc88cQ6VGS5 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc88cQ6VGS5 Gm24519-201ENSMUST00000104507 132 ntBASIC8.16□□□□□ -1.1
Ccdc88cQ6VGS5 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC8.16□□□□□ -1.1
Ccdc88cQ6VGS5 Gm12601-201ENSMUST00000118994 846 ntBASIC8.16□□□□□ -1.1
Ccdc88cQ6VGS5 Gm12879-201ENSMUST00000120003 1182 ntBASIC8.16□□□□□ -1.1
Ccdc88cQ6VGS5 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC8.16□□□□□ -1.1
Ccdc88cQ6VGS5 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Ccdc88cQ6VGS5 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC8.16□□□□□ -1.1
Ccdc88cQ6VGS5 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc88cQ6VGS5 Gm29605-201ENSMUST00000190800 292 ntBASIC8.16□□□□□ -1.1
Ccdc88cQ6VGS5 Gm37017-201ENSMUST00000195266 747 ntBASIC8.16□□□□□ -1.1
Ccdc88cQ6VGS5 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC8.16□□□□□ -1.1
Ccdc88cQ6VGS5 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC8.16□□□□□ -1.1
Ccdc88cQ6VGS5 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC8.16□□□□□ -1.1
Ccdc88cQ6VGS5 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc88cQ6VGS5 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc88cQ6VGS5 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc88cQ6VGS5 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc88cQ6VGS5 Supt20-202ENSMUST00000170552 1968 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc88cQ6VGS5 Khdc1a-201ENSMUST00000088407 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc88cQ6VGS5 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ccdc88cQ6VGS5 Gm37043-201ENSMUST00000194609 3105 ntBASIC8.16□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms