Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Gm40778-201ENSMUST00000217825 1344 ntBASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Lyz2-201ENSMUST00000092163 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Gm44185-201ENSMUST00000204539 3307 ntBASIC7.86□□□□□ -1.15
Trim43aQ3TL54 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Gm43961-201ENSMUST00000203289 1872 ntBASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Cisd3-202ENSMUST00000107584 546 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Gm16523-201ENSMUST00000121253 592 ntBASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Pogk-201ENSMUST00000127596 769 ntTSL 3 BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Gm13658-201ENSMUST00000135329 929 ntTSL 5 BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Gm11588-201ENSMUST00000141758 658 ntTSL 5 BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Gm10012-202ENSMUST00000170379 372 ntBASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Gm43008-201ENSMUST00000202346 286 ntBASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Gm44285-201ENSMUST00000203557 940 ntBASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Gm19254-201ENSMUST00000204828 294 ntBASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Rnf212-206ENSMUST00000212212 924 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 1700047G07Rik-202ENSMUST00000212351 842 ntTSL 5 BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Gm2089-201ENSMUST00000218294 479 ntBASIC7.86□□□□□ -1.15
Trim43aQ3TL54 AC167222.1-201ENSMUST00000219379 660 ntTSL 2 BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 AL591207.2-201ENSMUST00000222991 337 ntBASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Cd74-201ENSMUST00000050487 1218 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Wdr66-201ENSMUST00000069311 978 ntTSL 5 BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Olfr328-201ENSMUST00000073933 933 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Gm2531-201ENSMUST00000075609 512 ntBASIC7.86□□□□□ -1.15
Trim43aQ3TL54 AC156645.1-201ENSMUST00000223066 5194 ntBASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Tmem175-201ENSMUST00000063272 3956 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Etnppl-202ENSMUST00000163620 1482 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Gm37534-201ENSMUST00000194483 5222 ntBASIC7.85□□□□□ -1.15
Trim43aQ3TL54 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Trim43aQ3TL54 Gm43023-201ENSMUST00000197583 2106 ntBASIC7.85□□□□□ -1.15
Trim43aQ3TL54 Gm19583-201ENSMUST00000202993 1366 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Trim43aQ3TL54 AC158988.1-201ENSMUST00000226731 2624 ntBASIC7.85□□□□□ -1.15
Trim43aQ3TL54 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Trim43aQ3TL54 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Trim43aQ3TL54 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Trim43aQ3TL54 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Trim43aQ3TL54 D930007P13Rik-201ENSMUST00000181306 1324 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Trim43aQ3TL54 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC7.85□□□□□ -1.15
Trim43aQ3TL54 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Trim43aQ3TL54 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Trim43aQ3TL54 Gm24195-201ENSMUST00000116804 137 ntBASIC7.85□□□□□ -1.15
Trim43aQ3TL54 Armt1-202ENSMUST00000117489 680 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Trim43aQ3TL54 Gm4918-201ENSMUST00000119420 1084 ntBASIC7.85□□□□□ -1.15
Trim43aQ3TL54 Gm12123-201ENSMUST00000120348 472 ntBASIC7.85□□□□□ -1.15
Trim43aQ3TL54 Gm12593-201ENSMUST00000120981 743 ntBASIC7.85□□□□□ -1.15
Trim43aQ3TL54 Gm14749-201ENSMUST00000121269 333 ntBASIC7.85□□□□□ -1.15
Trim43aQ3TL54 Gm5270-201ENSMUST00000121506 1002 ntBASIC7.85□□□□□ -1.15
Trim43aQ3TL54 Gm5970-201ENSMUST00000131638 1216 ntBASIC7.85□□□□□ -1.15
Trim43aQ3TL54 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Trim43aQ3TL54 Gm26407-201ENSMUST00000158504 307 ntBASIC7.85□□□□□ -1.15
Trim43aQ3TL54 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC7.85□□□□□ -1.15
Trim43aQ3TL54 1700021A07Rik-202ENSMUST00000187763 485 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Trim43aQ3TL54 Gm43212-201ENSMUST00000198208 394 ntBASIC7.85□□□□□ -1.15
Trim43aQ3TL54 Gm42808-201ENSMUST00000198212 285 ntTSL 5 BASIC7.85□□□□□ -1.15
Trim43aQ3TL54 Gm42424-201ENSMUST00000198319 376 ntBASIC7.85□□□□□ -1.15
Trim43aQ3TL54 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Trim43aQ3TL54 Gm30808-201ENSMUST00000211166 845 ntTSL 5 BASIC7.85□□□□□ -1.15
Trim43aQ3TL54 AC069562.1-201ENSMUST00000224206 434 ntBASIC7.85□□□□□ -1.15
Trim43aQ3TL54 CT009728.1-201ENSMUST00000225228 1050 ntBASIC7.85□□□□□ -1.15
Trim43aQ3TL54 AC124715.2-201ENSMUST00000226762 617 ntBASIC7.85□□□□□ -1.15
Trim43aQ3TL54 4930556J24Rik-201ENSMUST00000042344 1220 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Trim43aQ3TL54 4930433N12Rik-201ENSMUST00000048921 1204 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Trim43aQ3TL54 Gm10283-201ENSMUST00000093494 354 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Trim43aQ3TL54 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Trim43aQ3TL54 Gm10805-201ENSMUST00000099710 399 ntBASIC7.85□□□□□ -1.15
Trim43aQ3TL54 Gm38009-201ENSMUST00000194884 3341 ntBASIC7.85□□□□□ -1.15
Trim43aQ3TL54 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
Trim43aQ3TL54 Gm21036-201ENSMUST00000207544 2611 ntBASIC7.85□□□□□ -1.15
Trim43aQ3TL54 Gm42478-201ENSMUST00000199252 1467 ntBASIC7.85□□□□□ -1.15
Trim43aQ3TL54 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
Trim43aQ3TL54 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Trim43aQ3TL54 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC7.84□□□□□ -1.15
Trim43aQ3TL54 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
Trim43aQ3TL54 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Trim43aQ3TL54 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC7.84□□□□□ -1.15
Trim43aQ3TL54 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 149.5 ms