Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 AC154806.2-201ENSMUST00000227212 2385 ntBASIC5.97□□□□□ -1.45
Cdx4Q07424 Srp54a-201ENSMUST00000021407 1515 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Cdx4Q07424 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC5.97□□□□□ -1.45
Cdx4Q07424 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cdx4Q07424 Rgs19-206ENSMUST00000108778 1427 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Cdx4Q07424 Rgs19-212ENSMUST00000165416 1427 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cdx4Q07424 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Cdx4Q07424 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
Cdx4Q07424 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Cdx4Q07424 Casr-203ENSMUST00000172826 3659 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Cdx4Q07424 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC5.97□□□□□ -1.45
Cdx4Q07424 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cdx4Q07424 Musk-205ENSMUST00000102893 3323 ntTSL 5 BASIC5.97□□□□□ -1.45
Cdx4Q07424 Gm37372-201ENSMUST00000193577 3311 ntBASIC5.97□□□□□ -1.45
Cdx4Q07424 Gm36879-201ENSMUST00000212313 2060 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Cdx4Q07424 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Cdx4Q07424 Gm9866-206ENSMUST00000222838 1580 ntTSL 5 BASIC5.97□□□□□ -1.45
Cdx4Q07424 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Cdx4Q07424 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cdx4Q07424 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cdx4Q07424 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC5.97□□□□□ -1.45
Cdx4Q07424 4930471M09Rik-202ENSMUST00000206475 1990 ntBASIC5.97□□□□□ -1.45
Cdx4Q07424 Pdgfd-201ENSMUST00000058692 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
Cdx4Q07424 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Cdx4Q07424 Gm44165-201ENSMUST00000203093 1469 ntBASIC5.96□□□□□ -1.45
Cdx4Q07424 Gm31408-201ENSMUST00000216695 1455 ntTSL 5 BASIC5.96□□□□□ -1.45
Cdx4Q07424 AC122878.1-201ENSMUST00000227716 1460 ntBASIC5.96□□□□□ -1.45
Cdx4Q07424 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
Cdx4Q07424 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Cdx4Q07424 Btk-201ENSMUST00000033617 2540 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Cdx4Q07424 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
Cdx4Q07424 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.45
Cdx4Q07424 Zfp473-202ENSMUST00000118162 3091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
Cdx4Q07424 Smarcal1-201ENSMUST00000047615 3059 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Cdx4Q07424 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Cdx4Q07424 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
Cdx4Q07424 Il1bos-202ENSMUST00000156601 2425 ntTSL 2 BASIC5.96□□□□□ -1.45
Cdx4Q07424 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
Cdx4Q07424 Ccr4-201ENSMUST00000054414 2805 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx4Q07424 Ssr3-201ENSMUST00000029414 2957 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx4Q07424 Gm34184-201ENSMUST00000216477 2713 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx4Q07424 Smco3-201ENSMUST00000068293 2056 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx4Q07424 Keg1-201ENSMUST00000025598 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx4Q07424 Gm11997-201ENSMUST00000118697 313 ntBASIC5.96□□□□□ -1.46
Cdx4Q07424 Gm12219-201ENSMUST00000119198 443 ntBASIC5.96□□□□□ -1.46
Cdx4Q07424 Gm9392-201ENSMUST00000119337 554 ntBASIC5.96□□□□□ -1.46
Cdx4Q07424 Gm12687-201ENSMUST00000119752 706 ntBASIC5.96□□□□□ -1.46
Cdx4Q07424 Gm6798-201ENSMUST00000119961 360 ntBASIC5.96□□□□□ -1.46
Cdx4Q07424 Gm14417-201ENSMUST00000120036 1074 ntBASIC5.96□□□□□ -1.46
Cdx4Q07424 Gm12400-201ENSMUST00000120915 1003 ntBASIC5.96□□□□□ -1.46
Cdx4Q07424 Gm12692-201ENSMUST00000121092 546 ntBASIC5.96□□□□□ -1.46
Cdx4Q07424 Gm13649-201ENSMUST00000122325 606 ntBASIC5.96□□□□□ -1.46
Cdx4Q07424 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC5.96□□□□□ -1.46
Cdx4Q07424 Gm12265-201ENSMUST00000139025 468 ntTSL 2 BASIC5.96□□□□□ -1.46
Cdx4Q07424 Gm6182-201ENSMUST00000156439 1208 ntBASIC5.96□□□□□ -1.46
Cdx4Q07424 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC5.96□□□□□ -1.46
Cdx4Q07424 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx4Q07424 Commd3-212ENSMUST00000171845 938 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Cdx4Q07424 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC5.96□□□□□ -1.46
Cdx4Q07424 Gm8307-201ENSMUST00000187682 1150 ntBASIC5.96□□□□□ -1.46
Cdx4Q07424 Plet1-202ENSMUST00000188047 739 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx4Q07424 Gm29126-201ENSMUST00000188686 151 ntBASIC5.96□□□□□ -1.46
Cdx4Q07424 Gm18799-201ENSMUST00000189104 913 ntBASIC5.96□□□□□ -1.46
Cdx4Q07424 Gm38087-201ENSMUST00000193653 265 ntTSL 5 BASIC5.96□□□□□ -1.46
Cdx4Q07424 Gm22149-202ENSMUST00000196259 137 ntBASIC5.96□□□□□ -1.46
Cdx4Q07424 Gm43560-201ENSMUST00000198100 773 ntBASIC5.96□□□□□ -1.46
Cdx4Q07424 AC137678.1-201ENSMUST00000198370 118 ntBASIC5.96□□□□□ -1.46
Cdx4Q07424 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC5.96□□□□□ -1.46
Cdx4Q07424 Gm42952-206ENSMUST00000199324 506 ntTSL 3 BASIC5.96□□□□□ -1.46
Cdx4Q07424 1600020E01Rik-203ENSMUST00000204008 713 ntTSL 5 BASIC5.96□□□□□ -1.46
Cdx4Q07424 Olfr1348-204ENSMUST00000208066 1135 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Cdx4Q07424 Il15-203ENSMUST00000209573 1164 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Cdx4Q07424 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC5.96□□□□□ -1.46
Cdx4Q07424 Rnf212-206ENSMUST00000212212 924 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Cdx4Q07424 Gm45888-201ENSMUST00000212348 1229 ntBASIC5.96□□□□□ -1.46
Cdx4Q07424 AC153500.1-201ENSMUST00000219794 625 ntTSL 3 BASIC5.96□□□□□ -1.46
Cdx4Q07424 1700104L18Rik-201ENSMUST00000220132 598 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx4Q07424 AC116589.4-201ENSMUST00000222390 216 ntBASIC5.96□□□□□ -1.46
Cdx4Q07424 CT030170.6-202ENSMUST00000223186 544 ntBASIC5.96□□□□□ -1.46
Cdx4Q07424 AC158392.1-201ENSMUST00000223720 1069 ntBASIC5.96□□□□□ -1.46
Cdx4Q07424 Pdcl2-201ENSMUST00000031145 1181 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx4Q07424 Gkn2-201ENSMUST00000032128 788 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx4Q07424 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Cdx4Q07424 Olfr125-201ENSMUST00000050255 1118 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Cdx4Q07424 Rnase1-201ENSMUST00000080126 992 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx4Q07424 Gm16391-201ENSMUST00000086601 447 ntBASIC5.96□□□□□ -1.46
Cdx4Q07424 A630095E13Rik-201ENSMUST00000093868 619 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx4Q07424 Olfr1247-201ENSMUST00000099771 945 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Cdx4Q07424 Supt20-203ENSMUST00000197502 2751 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Cdx4Q07424 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC5.96□□□□□ -1.46
Cdx4Q07424 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx4Q07424 Olfr381-204ENSMUST00000215358 2658 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Cdx4Q07424 Tars2-203ENSMUST00000098857 3228 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx4Q07424 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx4Q07424 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx4Q07424 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx4Q07424 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx4Q07424 Phc3-206ENSMUST00000129817 3019 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx4Q07424 Gm26512-201ENSMUST00000181874 3042 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx4Q07424 Ehhadh-201ENSMUST00000023559 3018 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms