Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 4930533D04Rik-201ENSMUST00000185478 788 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SgcaP82350 Gm29291-201ENSMUST00000186055 686 ntTSL 3 BASIC6.23□□□□□ -1.41
SgcaP82350 Gm28195-201ENSMUST00000186992 372 ntBASIC6.23□□□□□ -1.41
SgcaP82350 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
SgcaP82350 Gm5696-201ENSMUST00000189850 552 ntBASIC6.23□□□□□ -1.41
SgcaP82350 Olfr1392-201ENSMUST00000189851 1018 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
SgcaP82350 Gm37799-201ENSMUST00000194018 547 ntTSL 3 BASIC6.23□□□□□ -1.41
SgcaP82350 Gm38247-201ENSMUST00000194675 433 ntBASIC6.23□□□□□ -1.41
SgcaP82350 Gm37450-201ENSMUST00000195218 170 ntBASIC6.23□□□□□ -1.41
SgcaP82350 Olfr326-ps1-201ENSMUST00000204790 392 ntBASIC6.23□□□□□ -1.41
SgcaP82350 Gm30771-201ENSMUST00000205683 737 ntTSL 3 BASIC6.23□□□□□ -1.41
SgcaP82350 Gm3774-201ENSMUST00000209773 435 ntBASIC6.23□□□□□ -1.41
SgcaP82350 4930442G15Rik-201ENSMUST00000213112 1000 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SgcaP82350 Gm17950-201ENSMUST00000214617 646 ntBASIC6.23□□□□□ -1.41
SgcaP82350 Gm4800-201ENSMUST00000215776 1266 ntBASIC6.23□□□□□ -1.41
SgcaP82350 AC153937.2-202ENSMUST00000219583 670 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SgcaP82350 AC160109.1-201ENSMUST00000225592 729 ntBASIC6.23□□□□□ -1.41
SgcaP82350 CT030732.1-201ENSMUST00000226885 246 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
SgcaP82350 Med6-201ENSMUST00000002756 1003 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SgcaP82350 6030452D12Rik-201ENSMUST00000066875 669 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SgcaP82350 Klk1b11-201ENSMUST00000007156 863 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SgcaP82350 Gm43322-201ENSMUST00000196232 1612 ntBASIC6.23□□□□□ -1.41
SgcaP82350 Tpbpa-201ENSMUST00000021885 1621 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
SgcaP82350 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
SgcaP82350 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
SgcaP82350 Gm1976-202ENSMUST00000182639 1853 ntTSL 2 BASIC6.23□□□□□ -1.41
SgcaP82350 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SgcaP82350 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
SgcaP82350 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SgcaP82350 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
SgcaP82350 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SgcaP82350 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC6.23□□□□□ -1.41
SgcaP82350 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
SgcaP82350 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
SgcaP82350 Gm42940-201ENSMUST00000200361 2362 ntBASIC6.23□□□□□ -1.41
SgcaP82350 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
SgcaP82350 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SgcaP82350 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
SgcaP82350 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
SgcaP82350 Gm38366-201ENSMUST00000193127 1934 ntBASIC6.23□□□□□ -1.41
SgcaP82350 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SgcaP82350 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
SgcaP82350 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SgcaP82350 Gm18957-201ENSMUST00000197623 1813 ntBASIC6.22□□□□□ -1.41
SgcaP82350 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
SgcaP82350 Gm38009-201ENSMUST00000194884 3341 ntBASIC6.22□□□□□ -1.41
SgcaP82350 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC6.22□□□□□ -1.41
SgcaP82350 Gm15950-201ENSMUST00000162902 1973 ntBASIC6.22□□□□□ -1.41
SgcaP82350 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
SgcaP82350 Hsdl2-202ENSMUST00000107528 2626 ntTSL 2 BASIC6.22□□□□□ -1.41
SgcaP82350 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
SgcaP82350 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SgcaP82350 Gm43429-201ENSMUST00000197889 2251 ntBASIC6.22□□□□□ -1.41
SgcaP82350 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SgcaP82350 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
SgcaP82350 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC6.22□□□□□ -1.41
SgcaP82350 Gm13680-201ENSMUST00000119790 793 ntBASIC6.22□□□□□ -1.41
SgcaP82350 Gm13323-201ENSMUST00000120245 1151 ntBASIC6.22□□□□□ -1.41
SgcaP82350 Gm12133-201ENSMUST00000121775 661 ntBASIC6.22□□□□□ -1.41
SgcaP82350 Gm11895-201ENSMUST00000122165 467 ntBASIC6.22□□□□□ -1.41
SgcaP82350 Gm13776-201ENSMUST00000122236 1261 ntBASIC6.22□□□□□ -1.41
SgcaP82350 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SgcaP82350 Gm15343-201ENSMUST00000136382 640 ntTSL 3 BASIC6.22□□□□□ -1.41
SgcaP82350 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SgcaP82350 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SgcaP82350 Gm23598-201ENSMUST00000157262 144 ntBASIC6.22□□□□□ -1.41
SgcaP82350 Gm26211-201ENSMUST00000158578 129 ntBASIC6.22□□□□□ -1.41
SgcaP82350 5730435O14Rik-202ENSMUST00000170047 617 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SgcaP82350 Gm23413-201ENSMUST00000175521 125 ntBASIC6.22□□□□□ -1.41
SgcaP82350 Gm5698-201ENSMUST00000178317 724 ntBASIC6.22□□□□□ -1.41
SgcaP82350 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SgcaP82350 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SgcaP82350 Gm29491-201ENSMUST00000189481 506 ntTSL 5 BASIC6.22□□□□□ -1.41
SgcaP82350 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC6.22□□□□□ -1.41
SgcaP82350 Gm43555-201ENSMUST00000196588 310 ntBASIC6.22□□□□□ -1.41
SgcaP82350 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC6.22□□□□□ -1.41
SgcaP82350 Rpl18a-ps4-201ENSMUST00000206176 536 ntBASIC6.22□□□□□ -1.41
SgcaP82350 Gm31378-201ENSMUST00000213538 267 ntTSL 5 BASIC6.22□□□□□ -1.41
SgcaP82350 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
SgcaP82350 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC6.22□□□□□ -1.41
SgcaP82350 Cinp-205ENSMUST00000221182 774 ntTSL 3 BASIC6.22□□□□□ -1.41
SgcaP82350 AC159312.1-201ENSMUST00000221508 856 ntTSL 2 BASIC6.22□□□□□ -1.41
SgcaP82350 Gm46379-201ENSMUST00000222551 265 ntBASIC6.22□□□□□ -1.41
SgcaP82350 AC147096.1-201ENSMUST00000227648 352 ntBASIC6.22□□□□□ -1.41
SgcaP82350 Ubd-201ENSMUST00000038844 931 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SgcaP82350 Krtap7-1-201ENSMUST00000056118 620 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SgcaP82350 Gm17541-201ENSMUST00000080062 525 ntBASIC6.22□□□□□ -1.41
SgcaP82350 Mir187-201ENSMUST00000083598 61 ntBASIC6.22□□□□□ -1.41
SgcaP82350 Gm22865-201ENSMUST00000083949 214 ntBASIC6.22□□□□□ -1.41
SgcaP82350 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
SgcaP82350 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SgcaP82350 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
SgcaP82350 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SgcaP82350 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SgcaP82350 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC6.22□□□□□ -1.41
SgcaP82350 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SgcaP82350 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
SgcaP82350 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SgcaP82350 Gm20531-201ENSMUST00000174861 1373 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SgcaP82350 Gm38178-201ENSMUST00000194502 2471 ntBASIC6.21□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms