Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Mpdz-201ENSMUST00000102830 7512 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
NcanP55066 Baz2a-202ENSMUST00000170054 8372 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
NcanP55066 Baz2a-201ENSMUST00000045621 8369 ntAPPRIS P2 TSL 5 BASIC7.97□□□□□ -1.13
NcanP55066 Tex21-201ENSMUST00000021453 2137 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
NcanP55066 Gm973-201ENSMUST00000114243 3595 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
NcanP55066 Lama1-201ENSMUST00000035471 9518 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
NcanP55066 Zfp292-201ENSMUST00000047950 9986 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
NcanP55066 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
NcanP55066 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
NcanP55066 Cse1l-201ENSMUST00000002790 3641 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
NcanP55066 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
NcanP55066 Gbp6-201ENSMUST00000196520 2604 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
NcanP55066 Gm43080-201ENSMUST00000199006 2643 ntBASIC7.97□□□□□ -1.13
NcanP55066 Olfr686-202ENSMUST00000214147 2646 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
NcanP55066 Olfr686-203ENSMUST00000216143 2612 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
NcanP55066 Olfr750-202ENSMUST00000216202 5789 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
NcanP55066 Olfr686-204ENSMUST00000216613 2613 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
NcanP55066 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
NcanP55066 AC164437.4-202ENSMUST00000228794 2413 ntBASIC7.97□□□□□ -1.13
NcanP55066 Plekha6-202ENSMUST00000105082 7085 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
NcanP55066 Gm18830-201ENSMUST00000199036 1396 ntBASIC7.97□□□□□ -1.13
NcanP55066 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
NcanP55066 Plec-221ENSMUST00000171562 14944 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
NcanP55066 Plec-204ENSMUST00000072692 14944 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
NcanP55066 Serpina3f-201ENSMUST00000101080 2207 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
NcanP55066 Nup98-203ENSMUST00000210682 6694 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
NcanP55066 Gm37314-201ENSMUST00000193545 2685 ntBASIC7.96□□□□□ -1.13
NcanP55066 Vmn1r40-204ENSMUST00000228485 2689 ntBASIC7.96□□□□□ -1.13
NcanP55066 Adar-202ENSMUST00000098924 5909 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
NcanP55066 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.13
NcanP55066 AC126251.1-201ENSMUST00000228170 2707 ntBASIC7.96□□□□□ -1.13
NcanP55066 Gm37949-201ENSMUST00000192808 2091 ntBASIC7.96□□□□□ -1.13
NcanP55066 Myo1f-201ENSMUST00000087605 3819 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
NcanP55066 Arsj-201ENSMUST00000093976 3859 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
NcanP55066 Pcdh15-216ENSMUST00000131724 6322 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.13
NcanP55066 Tdrd1-204ENSMUST00000121249 5047 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
NcanP55066 Gm42897-201ENSMUST00000201486 2112 ntBASIC7.96□□□□□ -1.13
NcanP55066 Rimklb-206ENSMUST00000204731 3039 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
NcanP55066 Synpo2-201ENSMUST00000051443 3719 ntBASIC7.96□□□□□ -1.13
NcanP55066 Rian-202ENSMUST00000181253 2355 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
NcanP55066 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
NcanP55066 Kcnma1-224ENSMUST00000224077 3537 ntAPPRIS ALT2 BASIC7.96□□□□□ -1.14
NcanP55066 Gm2108-201ENSMUST00000165058 2177 ntBASIC7.96□□□□□ -1.14
NcanP55066 Nme8-201ENSMUST00000039340 1704 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
NcanP55066 Pdgfd-201ENSMUST00000058692 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
NcanP55066 Gm5228-201ENSMUST00000117186 357 ntBASIC7.96□□□□□ -1.14
NcanP55066 Gm11850-201ENSMUST00000119679 479 ntBASIC7.96□□□□□ -1.14
NcanP55066 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC7.96□□□□□ -1.14
NcanP55066 Gm12634-201ENSMUST00000122157 992 ntBASIC7.96□□□□□ -1.14
NcanP55066 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC7.96□□□□□ -1.14
NcanP55066 Gm9359-201ENSMUST00000163721 1221 ntBASIC7.96□□□□□ -1.14
NcanP55066 Gm8046-201ENSMUST00000172151 616 ntBASIC7.96□□□□□ -1.14
NcanP55066 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
NcanP55066 n-R5s93-201ENSMUST00000180091 119 ntBASIC7.96□□□□□ -1.14
NcanP55066 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC7.96□□□□□ -1.14
NcanP55066 Gm37349-201ENSMUST00000194205 624 ntBASIC7.96□□□□□ -1.14
NcanP55066 Gm43382-201ENSMUST00000198954 838 ntBASIC7.96□□□□□ -1.14
NcanP55066 Gm2860-201ENSMUST00000199226 707 ntBASIC7.96□□□□□ -1.14
NcanP55066 Gm19175-201ENSMUST00000199895 916 ntBASIC7.96□□□□□ -1.14
NcanP55066 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC7.96□□□□□ -1.14
NcanP55066 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC7.96□□□□□ -1.14
NcanP55066 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC7.96□□□□□ -1.14
NcanP55066 AC137871.3-201ENSMUST00000226628 225 ntBASIC7.96□□□□□ -1.14
NcanP55066 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
NcanP55066 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
NcanP55066 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
NcanP55066 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
NcanP55066 Gm10221-201ENSMUST00000088299 309 ntBASIC7.96□□□□□ -1.14
NcanP55066 Ing5-201ENSMUST00000027505 4533 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
NcanP55066 Gm37978-201ENSMUST00000194736 2915 ntBASIC7.96□□□□□ -1.14
NcanP55066 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
NcanP55066 Klf12-205ENSMUST00000228216 5890 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
NcanP55066 Tcf20-202ENSMUST00000109510 7347 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
NcanP55066 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.14
NcanP55066 Gm43982-201ENSMUST00000204995 1829 ntBASIC7.96□□□□□ -1.14
NcanP55066 Tbc1d15-201ENSMUST00000020339 3752 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
NcanP55066 Gm43336-201ENSMUST00000200487 4504 ntBASIC7.96□□□□□ -1.14
NcanP55066 Eya3-213ENSMUST00000180250 5020 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
NcanP55066 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
NcanP55066 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
NcanP55066 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
NcanP55066 Gas2l3-201ENSMUST00000099374 6748 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.14
NcanP55066 Acpp-202ENSMUST00000112590 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
NcanP55066 Nckap1l-201ENSMUST00000047405 4717 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
NcanP55066 Prokr1-203ENSMUST00000204682 4230 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
NcanP55066 Mmp27-201ENSMUST00000120900 1662 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
NcanP55066 Nr1i3-208ENSMUST00000155126 2980 ntTSL 2 BASIC7.95□□□□□ -1.14
NcanP55066 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
NcanP55066 Man2b1-201ENSMUST00000034121 3822 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
NcanP55066 Slc26a1-201ENSMUST00000051757 3812 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
NcanP55066 Srgap3-203ENSMUST00000113169 8300 ntTSL 5 BASIC7.95□□□□□ -1.14
NcanP55066 Fnbp1-207ENSMUST00000113559 4378 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
NcanP55066 5330417C22Rik-201ENSMUST00000048012 3321 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
NcanP55066 Zfp68-202ENSMUST00000085852 3318 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
NcanP55066 Vmn1r193-203ENSMUST00000227562 6840 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
NcanP55066 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC7.95□□□□□ -1.14
NcanP55066 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC7.95□□□□□ -1.14
NcanP55066 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC7.95□□□□□ -1.14
NcanP55066 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC7.95□□□□□ -1.14
NcanP55066 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC7.95□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms