Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Ms4a13-201ENSMUST00000073380 1375 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rfx1P48377 Pot1b-201ENSMUST00000086876 3499 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Rfx1P48377 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Rfx1P48377 Ociad1-203ENSMUST00000166823 3354 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Rfx1P48377 Krt39-201ENSMUST00000076948 1449 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rfx1P48377 Gm7337-202ENSMUST00000181439 2655 ntBASIC9.25□□□□□ -0.93
Rfx1P48377 3110009F21Rik-201ENSMUST00000223217 1625 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Rfx1P48377 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rfx1P48377 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC9.25□□□□□ -0.93
Rfx1P48377 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rfx1P48377 Igkv14-130-201ENSMUST00000103307 350 ntAPPRIS ALT2 BASIC9.25□□□□□ -0.93
Rfx1P48377 Gm25762-201ENSMUST00000103984 132 ntBASIC9.25□□□□□ -0.93
Rfx1P48377 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rfx1P48377 Paqr5-202ENSMUST00000113990 1073 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Rfx1P48377 Gm13542-201ENSMUST00000118484 637 ntBASIC9.25□□□□□ -0.93
Rfx1P48377 Gm15040-201ENSMUST00000118561 1241 ntBASIC9.25□□□□□ -0.93
Rfx1P48377 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
Rfx1P48377 A630023P12Rik-202ENSMUST00000141420 495 ntTSL 2 BASIC9.25□□□□□ -0.93
Rfx1P48377 Olfr754-ps1-201ENSMUST00000173181 911 ntBASIC9.25□□□□□ -0.93
Rfx1P48377 Gm24083-201ENSMUST00000175174 120 ntBASIC9.25□□□□□ -0.93
Rfx1P48377 Vmn2r-ps7-201ENSMUST00000176244 1098 ntBASIC9.25□□□□□ -0.93
Rfx1P48377 Gm27224-201ENSMUST00000184749 564 ntTSL 3 BASIC9.25□□□□□ -0.93
Rfx1P48377 Gm29513-201ENSMUST00000185741 202 ntBASIC9.25□□□□□ -0.93
Rfx1P48377 Gm28958-201ENSMUST00000185864 703 ntBASIC9.25□□□□□ -0.93
Rfx1P48377 Gm29362-201ENSMUST00000187898 133 ntBASIC9.25□□□□□ -0.93
Rfx1P48377 1700065J18Rik-202ENSMUST00000190576 387 ntTSL 3 BASIC9.25□□□□□ -0.93
Rfx1P48377 Gm5851-201ENSMUST00000194132 1204 ntBASIC9.25□□□□□ -0.93
Rfx1P48377 Gm37395-201ENSMUST00000194721 697 ntBASIC9.25□□□□□ -0.93
Rfx1P48377 Gm38135-201ENSMUST00000195068 502 ntBASIC9.25□□□□□ -0.93
Rfx1P48377 Gm42667-201ENSMUST00000196132 234 ntBASIC9.25□□□□□ -0.93
Rfx1P48377 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC9.25□□□□□ -0.93
Rfx1P48377 Gm45274-201ENSMUST00000209938 647 ntTSL 3 BASIC9.25□□□□□ -0.93
Rfx1P48377 Gm8948-201ENSMUST00000216371 370 ntBASIC9.25□□□□□ -0.93
Rfx1P48377 Gm8171-201ENSMUST00000217443 720 ntBASIC9.25□□□□□ -0.93
Rfx1P48377 Gm18504-201ENSMUST00000220917 929 ntBASIC9.25□□□□□ -0.93
Rfx1P48377 Zfp389-202ENSMUST00000224437 1234 ntBASIC9.25□□□□□ -0.93
Rfx1P48377 AC163664.1-201ENSMUST00000226251 1248 ntBASIC9.25□□□□□ -0.93
Rfx1P48377 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rfx1P48377 Bdh2-201ENSMUST00000029817 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rfx1P48377 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Rfx1P48377 n-R5s28-201ENSMUST00000082814 119 ntBASIC9.25□□□□□ -0.93
Rfx1P48377 Olfr2-201ENSMUST00000094109 1250 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rfx1P48377 Gm44249-201ENSMUST00000204538 1805 ntBASIC9.25□□□□□ -0.93
Rfx1P48377 Gm44898-201ENSMUST00000205934 2223 ntBASIC9.25□□□□□ -0.93
Rfx1P48377 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Rfx1P48377 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC9.25□□□□□ -0.93
Rfx1P48377 Gm28112-201ENSMUST00000190898 1875 ntBASIC9.25□□□□□ -0.93
Rfx1P48377 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Rfx1P48377 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Rfx1P48377 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC9.25□□□□□ -0.93
Rfx1P48377 Gm20731-201ENSMUST00000193462 2288 ntBASIC9.25□□□□□ -0.93
Rfx1P48377 Vmn2r40-201ENSMUST00000171942 3623 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Rfx1P48377 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Rfx1P48377 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Rfx1P48377 Gm37382-201ENSMUST00000193032 1596 ntBASIC9.24□□□□□ -0.93
Rfx1P48377 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Rfx1P48377 Npr3-204ENSMUST00000228489 1969 ntBASIC9.24□□□□□ -0.93
Rfx1P48377 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Rfx1P48377 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Rfx1P48377 2010310C07Rik-201ENSMUST00000187172 2226 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Rfx1P48377 Gm37210-201ENSMUST00000192484 2004 ntBASIC9.24□□□□□ -0.93
Rfx1P48377 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Rfx1P48377 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC9.24□□□□□ -0.93
Rfx1P48377 Acsl4-202ENSMUST00000112903 4956 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Rfx1P48377 Acsl4-203ENSMUST00000112904 4959 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Rfx1P48377 Olfr140-203ENSMUST00000216475 3574 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Rfx1P48377 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Rfx1P48377 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC9.24□□□□□ -0.93
Rfx1P48377 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC9.24□□□□□ -0.93
Rfx1P48377 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC9.24□□□□□ -0.93
Rfx1P48377 Gm14824-201ENSMUST00000119421 737 ntBASIC9.24□□□□□ -0.93
Rfx1P48377 Gm2214-201ENSMUST00000121333 330 ntBASIC9.24□□□□□ -0.93
Rfx1P48377 Gm12870-201ENSMUST00000121383 1016 ntBASIC9.24□□□□□ -0.93
Rfx1P48377 Gm11662-201ENSMUST00000121389 1193 ntBASIC9.24□□□□□ -0.93
Rfx1P48377 Gm11760-201ENSMUST00000122355 796 ntBASIC9.24□□□□□ -0.93
Rfx1P48377 Gm15221-201ENSMUST00000144439 414 ntTSL 3 BASIC9.24□□□□□ -0.93
Rfx1P48377 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Rfx1P48377 Ttc9c-204ENSMUST00000153281 1192 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Rfx1P48377 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC9.24□□□□□ -0.93
Rfx1P48377 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Rfx1P48377 Gm3275-201ENSMUST00000169145 487 ntBASIC9.24□□□□□ -0.93
Rfx1P48377 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC9.24□□□□□ -0.93
Rfx1P48377 Scgb1b27-202ENSMUST00000173387 762 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
Rfx1P48377 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Rfx1P48377 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC9.24□□□□□ -0.93
Rfx1P48377 Gm21917-203ENSMUST00000180309 561 ntTSL 3 BASIC9.24□□□□□ -0.93
Rfx1P48377 Gm37623-201ENSMUST00000193691 803 ntTSL 3 BASIC9.24□□□□□ -0.93
Rfx1P48377 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC9.24□□□□□ -0.93
Rfx1P48377 Gm32921-201ENSMUST00000200592 810 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Rfx1P48377 Olfr320-201ENSMUST00000204718 928 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Rfx1P48377 Gm18255-201ENSMUST00000211316 765 ntBASIC9.24□□□□□ -0.93
Rfx1P48377 Gm7727-201ENSMUST00000219830 671 ntBASIC9.24□□□□□ -0.93
Rfx1P48377 AC163354.1-202ENSMUST00000221460 656 ntTSL 5 BASIC9.24□□□□□ -0.93
Rfx1P48377 AC160930.2-201ENSMUST00000226608 303 ntBASIC9.24□□□□□ -0.93
Rfx1P48377 Uchl4-201ENSMUST00000039011 1162 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Rfx1P48377 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Rfx1P48377 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Rfx1P48377 Gm43970-201ENSMUST00000204346 3605 ntBASIC9.24□□□□□ -0.93
Rfx1P48377 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Rfx1P48377 Gm44916-201ENSMUST00000208664 2194 ntBASIC9.24□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms