Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm9658-201ENSMUST00000182757 1012 ntBASIC7.56□□□□□ -1.2
HttP42859 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
HttP42859 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
HttP42859 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
HttP42859 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
HttP42859 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
HttP42859 Il6st-203ENSMUST00000183663 8678 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
HttP42859 Slc7a2-204ENSMUST00000118432 3681 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
HttP42859 Havcr1-201ENSMUST00000047568 1892 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
HttP42859 Brpf1-201ENSMUST00000113117 4540 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
HttP42859 Gm8177-201ENSMUST00000181591 1336 ntBASIC7.56□□□□□ -1.2
HttP42859 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
HttP42859 Mkl2-201ENSMUST00000009713 5815 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
HttP42859 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
HttP42859 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
HttP42859 Gm25919-201ENSMUST00000104271 132 ntBASIC7.56□□□□□ -1.2
HttP42859 Gm13237-201ENSMUST00000122151 635 ntBASIC7.56□□□□□ -1.2
HttP42859 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC7.56□□□□□ -1.2
HttP42859 Gm26086-201ENSMUST00000157902 263 ntBASIC7.56□□□□□ -1.2
HttP42859 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC7.56□□□□□ -1.2
HttP42859 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC7.56□□□□□ -1.2
HttP42859 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
HttP42859 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC7.56□□□□□ -1.2
HttP42859 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC7.56□□□□□ -1.2
HttP42859 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC7.56□□□□□ -1.2
HttP42859 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC7.56□□□□□ -1.2
HttP42859 AC153512.2-201ENSMUST00000220363 1273 ntTSL 5 BASIC7.56□□□□□ -1.2
HttP42859 Pnp-203ENSMUST00000048615 2942 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
HttP42859 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC7.56□□□□□ -1.2
HttP42859 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
HttP42859 Ldlr-202ENSMUST00000213114 4318 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
HttP42859 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
HttP42859 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
HttP42859 Zfp169-207ENSMUST00000177530 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
HttP42859 Gm28370-201ENSMUST00000185303 3375 ntTSL 5 BASIC7.56□□□□□ -1.2
HttP42859 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
HttP42859 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
HttP42859 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
HttP42859 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
HttP42859 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
HttP42859 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
HttP42859 Rhobtb1-201ENSMUST00000020101 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
HttP42859 Dab1-201ENSMUST00000106826 996 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
HttP42859 Gm11848-201ENSMUST00000121207 973 ntBASIC7.56□□□□□ -1.2
HttP42859 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
HttP42859 Gm28883-201ENSMUST00000189256 369 ntBASIC7.56□□□□□ -1.2
HttP42859 Gm37265-201ENSMUST00000191698 885 ntBASIC7.56□□□□□ -1.2
HttP42859 Gm37609-201ENSMUST00000191778 678 ntBASIC7.56□□□□□ -1.2
HttP42859 Mir6906-201ENSMUST00000198998 58 ntBASIC7.56□□□□□ -1.2
HttP42859 AC164424.3-201ENSMUST00000220809 148 ntBASIC7.56□□□□□ -1.2
HttP42859 AC166358.8-201ENSMUST00000223288 105 ntBASIC7.56□□□□□ -1.2
HttP42859 AC124739.1-201ENSMUST00000223433 148 ntBASIC7.56□□□□□ -1.2
HttP42859 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
HttP42859 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
HttP42859 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
HttP42859 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC7.56□□□□□ -1.2
HttP42859 Gm43321-201ENSMUST00000198897 2409 ntBASIC7.56□□□□□ -1.2
HttP42859 Gm37326-201ENSMUST00000192828 3071 ntBASIC7.56□□□□□ -1.2
HttP42859 Serpina3f-203ENSMUST00000167049 2042 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
HttP42859 Gpr35-201ENSMUST00000027489 3270 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
HttP42859 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
HttP42859 Gm44669-201ENSMUST00000207774 1969 ntBASIC7.55□□□□□ -1.2
HttP42859 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
HttP42859 Angpt2-201ENSMUST00000033846 3560 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
HttP42859 Map4k4-217ENSMUST00000195636 4082 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
HttP42859 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
HttP42859 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC7.55□□□□□ -1.2
HttP42859 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
HttP42859 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
HttP42859 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC7.55□□□□□ -1.2
HttP42859 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC7.55□□□□□ -1.2
HttP42859 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
HttP42859 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC7.55□□□□□ -1.2
HttP42859 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
HttP42859 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
HttP42859 Gm42576-201ENSMUST00000202336 2846 ntBASIC7.55□□□□□ -1.2
HttP42859 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
HttP42859 Phf6-201ENSMUST00000078944 4350 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
HttP42859 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
HttP42859 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
HttP42859 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
HttP42859 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
HttP42859 2900027M19Rik-201ENSMUST00000207411 4448 ntBASIC7.55□□□□□ -1.2
HttP42859 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
HttP42859 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
HttP42859 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
HttP42859 Gm8844-201ENSMUST00000119460 2614 ntBASIC7.55□□□□□ -1.2
HttP42859 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
HttP42859 Gm24789-201ENSMUST00000104282 131 ntBASIC7.55□□□□□ -1.2
HttP42859 Gm11256-201ENSMUST00000118109 829 ntBASIC7.55□□□□□ -1.2
HttP42859 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
HttP42859 Gm24824-201ENSMUST00000175097 78 ntBASIC7.55□□□□□ -1.2
HttP42859 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
HttP42859 Gm37203-201ENSMUST00000191618 385 ntBASIC7.55□□□□□ -1.2
HttP42859 Mir298-201ENSMUST00000083476 82 ntBASIC7.55□□□□□ -1.2
HttP42859 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
HttP42859 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
HttP42859 Tcp10c-201ENSMUST00000097403 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
HttP42859 Mat1a-203ENSMUST00000225720 3468 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
HttP42859 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms