Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Satb1-203ENSMUST00000129667 2896 ntAPPRIS P2 TSL 5 BASIC8.74□□□□□ -1.01
Traf1P39428 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Traf1P39428 Anapc15-210ENSMUST00000144207 3103 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Traf1P39428 Gm16072-201ENSMUST00000119574 2377 ntBASIC8.73□□□□□ -1.01
Traf1P39428 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Traf1P39428 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Traf1P39428 Ociad1-203ENSMUST00000166823 3354 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Traf1P39428 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Traf1P39428 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Traf1P39428 Ighd-202ENSMUST00000194162 1806 ntAPPRIS P5 BASIC8.73□□□□□ -1.01
Traf1P39428 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Traf1P39428 Spata31d1a-202ENSMUST00000224469 1616 ntBASIC8.73□□□□□ -1.01
Traf1P39428 Scd3-201ENSMUST00000026220 3470 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Traf1P39428 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC8.73□□□□□ -1.01
Traf1P39428 AC126251.1-201ENSMUST00000228170 2707 ntBASIC8.73□□□□□ -1.01
Traf1P39428 Gm7562-201ENSMUST00000210502 2537 ntBASIC8.73□□□□□ -1.01
Traf1P39428 Gm11810-201ENSMUST00000118311 333 ntBASIC8.73□□□□□ -1.01
Traf1P39428 Olfr634-ps1-201ENSMUST00000119267 955 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Traf1P39428 Gm16056-201ENSMUST00000119293 135 ntBASIC8.73□□□□□ -1.01
Traf1P39428 Gm13495-201ENSMUST00000121156 537 ntBASIC8.73□□□□□ -1.01
Traf1P39428 Gm25780-201ENSMUST00000122528 253 ntBASIC8.73□□□□□ -1.01
Traf1P39428 Gm24893-201ENSMUST00000122745 369 ntBASIC8.73□□□□□ -1.01
Traf1P39428 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC8.73□□□□□ -1.01
Traf1P39428 Gm37336-201ENSMUST00000192794 760 ntTSL 2 BASIC8.73□□□□□ -1.01
Traf1P39428 Prkar2a-206ENSMUST00000195405 1143 ntTSL 5 BASIC8.73□□□□□ -1.01
Traf1P39428 Gm44356-201ENSMUST00000196731 111 ntBASIC8.73□□□□□ -1.01
Traf1P39428 Gm4605-201ENSMUST00000203148 625 ntBASIC8.73□□□□□ -1.01
Traf1P39428 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Traf1P39428 Gm7394-201ENSMUST00000209138 1032 ntBASIC8.73□□□□□ -1.01
Traf1P39428 CT009550.2-201ENSMUST00000228851 399 ntBASIC8.73□□□□□ -1.01
Traf1P39428 Gm5250-201ENSMUST00000059065 321 ntBASIC8.73□□□□□ -1.01
Traf1P39428 Tex37-201ENSMUST00000063456 814 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Traf1P39428 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Traf1P39428 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Traf1P39428 Dyrk1a-201ENSMUST00000023614 5754 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Traf1P39428 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Traf1P39428 Galnt11-203ENSMUST00000114952 2449 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Traf1P39428 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Traf1P39428 Gm44104-201ENSMUST00000204736 3777 ntBASIC8.73□□□□□ -1.01
Traf1P39428 Gm9125-201ENSMUST00000178458 2233 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Traf1P39428 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Traf1P39428 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Traf1P39428 Gm19031-201ENSMUST00000176280 1365 ntBASIC8.73□□□□□ -1.01
Traf1P39428 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Traf1P39428 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Traf1P39428 Gm43571-201ENSMUST00000200067 3098 ntBASIC8.72□□□□□ -1.01
Traf1P39428 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC8.72□□□□□ -1.01
Traf1P39428 Folh1-201ENSMUST00000001824 3125 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
Traf1P39428 Tbx20-201ENSMUST00000052946 9091 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
Traf1P39428 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Traf1P39428 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Traf1P39428 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
Traf1P39428 Ceacam1-208ENSMUST00000206676 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Traf1P39428 Gm14248-201ENSMUST00000117790 544 ntBASIC8.72□□□□□ -1.01
Traf1P39428 Rps8-ps3-201ENSMUST00000121011 650 ntBASIC8.72□□□□□ -1.01
Traf1P39428 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Traf1P39428 Gm15286-201ENSMUST00000150623 743 ntTSL 3 BASIC8.72□□□□□ -1.01
Traf1P39428 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC8.72□□□□□ -1.01
Traf1P39428 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Traf1P39428 Mir7669-201ENSMUST00000183442 58 ntBASIC8.72□□□□□ -1.01
Traf1P39428 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC8.72□□□□□ -1.01
Traf1P39428 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC8.72□□□□□ -1.01
Traf1P39428 Gm42804-201ENSMUST00000199701 178 ntBASIC8.72□□□□□ -1.01
Traf1P39428 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC8.72□□□□□ -1.01
Traf1P39428 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC8.72□□□□□ -1.01
Traf1P39428 Gm8489-201ENSMUST00000209876 1152 ntBASIC8.72□□□□□ -1.01
Traf1P39428 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC8.72□□□□□ -1.01
Traf1P39428 Gm45925-202ENSMUST00000219904 1136 ntBASIC8.72□□□□□ -1.01
Traf1P39428 AC154849.2-201ENSMUST00000223781 974 ntBASIC8.72□□□□□ -1.01
Traf1P39428 Exoc2-202ENSMUST00000102946 4375 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Traf1P39428 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Traf1P39428 Pknox2-207ENSMUST00000177218 3393 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Traf1P39428 AC124414.1-201ENSMUST00000218033 2946 ntBASIC8.72□□□□□ -1.01
Traf1P39428 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Traf1P39428 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Traf1P39428 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Traf1P39428 Masp2-201ENSMUST00000052060 3058 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Traf1P39428 Asph-209ENSMUST00000108335 2514 ntTSL 5 BASIC8.72□□□□□ -1.01
Traf1P39428 Gm43279-201ENSMUST00000202376 2512 ntBASIC8.72□□□□□ -1.01
Traf1P39428 Olfr78-202ENSMUST00000168007 1962 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Traf1P39428 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Traf1P39428 Rgs19-206ENSMUST00000108778 1427 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Traf1P39428 Rgs19-212ENSMUST00000165416 1427 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Traf1P39428 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
Traf1P39428 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Traf1P39428 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Traf1P39428 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Traf1P39428 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Traf1P39428 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Traf1P39428 BC085271-201ENSMUST00000191852 1487 ntBASIC8.71□□□□□ -1.01
Traf1P39428 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Traf1P39428 Zfp473-207ENSMUST00000149011 9230 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Traf1P39428 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Traf1P39428 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Traf1P39428 Gm25593-201ENSMUST00000102272 96 ntBASIC8.71□□□□□ -1.02
Traf1P39428 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Traf1P39428 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC8.71□□□□□ -1.02
Traf1P39428 Gm11865-201ENSMUST00000118093 859 ntBASIC8.71□□□□□ -1.02
Traf1P39428 Gm13438-201ENSMUST00000120100 573 ntBASIC8.71□□□□□ -1.02
Traf1P39428 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC8.71□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms