Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Polr2k-201ENSMUST00000057177 601 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cd28P31041 Gm17541-201ENSMUST00000080062 525 ntBASIC6.39□□□□□ -1.39
Cd28P31041 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cd28P31041 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cd28P31041 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cd28P31041 Gm42462-201ENSMUST00000196543 1363 ntBASIC6.39□□□□□ -1.39
Cd28P31041 Gm4863-201ENSMUST00000196907 1381 ntBASIC6.39□□□□□ -1.39
Cd28P31041 Gm7647-201ENSMUST00000200996 1389 ntBASIC6.39□□□□□ -1.39
Cd28P31041 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Cd28P31041 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cd28P31041 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Cd28P31041 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
Cd28P31041 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cd28P31041 Gm43285-201ENSMUST00000196563 3592 ntBASIC6.39□□□□□ -1.39
Cd28P31041 Gm5084-202ENSMUST00000224064 3609 ntBASIC6.39□□□□□ -1.39
Cd28P31041 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cd28P31041 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
Cd28P31041 A230001M10Rik-203ENSMUST00000198712 1747 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cd28P31041 Gm33035-201ENSMUST00000219854 1718 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cd28P31041 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC6.39□□□□□ -1.39
Cd28P31041 Olfr1284-201ENSMUST00000062407 1774 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Cd28P31041 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC6.39□□□□□ -1.39
Cd28P31041 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Cd28P31041 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cd28P31041 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
Cd28P31041 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cd28P31041 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cd28P31041 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cd28P31041 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cd28P31041 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC6.38□□□□□ -1.39
Cd28P31041 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cd28P31041 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Cd28P31041 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cd28P31041 Klf5-202ENSMUST00000226784 2852 ntBASIC6.38□□□□□ -1.39
Cd28P31041 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC6.38□□□□□ -1.39
Cd28P31041 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cd28P31041 n-R5s72-201ENSMUST00000104518 119 ntBASIC6.38□□□□□ -1.39
Cd28P31041 Gm24071-201ENSMUST00000104520 132 ntBASIC6.38□□□□□ -1.39
Cd28P31041 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC6.38□□□□□ -1.39
Cd28P31041 Gm5931-201ENSMUST00000121308 477 ntBASIC6.38□□□□□ -1.39
Cd28P31041 Bambi-ps1-201ENSMUST00000121525 592 ntBASIC6.38□□□□□ -1.39
Cd28P31041 AA623943-201ENSMUST00000121794 354 ntBASIC6.38□□□□□ -1.39
Cd28P31041 Gm12967-201ENSMUST00000122147 289 ntBASIC6.38□□□□□ -1.39
Cd28P31041 Wdr61-205ENSMUST00000130368 1162 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cd28P31041 Slc15a2-212ENSMUST00000168279 958 ntTSL 3 BASIC6.38□□□□□ -1.39
Cd28P31041 Spp2-202ENSMUST00000176708 710 ntTSL 2 BASIC6.38□□□□□ -1.39
Cd28P31041 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cd28P31041 Gm26977-201ENSMUST00000183151 996 ntBASIC6.38□□□□□ -1.39
Cd28P31041 Gm29000-202ENSMUST00000185562 571 ntTSL 5 BASIC6.38□□□□□ -1.39
Cd28P31041 Gm29617-203ENSMUST00000186558 1033 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cd28P31041 Gm28677-203ENSMUST00000187144 1134 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cd28P31041 Gm28749-204ENSMUST00000187827 571 ntTSL 5 BASIC6.38□□□□□ -1.39
Cd28P31041 Gm29178-207ENSMUST00000188496 1013 ntTSL 5 BASIC6.38□□□□□ -1.39
Cd28P31041 Gm28844-206ENSMUST00000189297 815 ntTSL 5 BASIC6.38□□□□□ -1.39
Cd28P31041 Gm5541-201ENSMUST00000193248 1113 ntBASIC6.38□□□□□ -1.39
Cd28P31041 Mllt11-202ENSMUST00000196025 624 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
Cd28P31041 Gm42932-201ENSMUST00000197280 744 ntBASIC6.38□□□□□ -1.39
Cd28P31041 Gm43815-201ENSMUST00000197676 990 ntBASIC6.38□□□□□ -1.39
Cd28P31041 Gm23011-202ENSMUST00000197855 275 ntBASIC6.38□□□□□ -1.39
Cd28P31041 Gm43805-201ENSMUST00000198488 824 ntBASIC6.38□□□□□ -1.39
Cd28P31041 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC6.38□□□□□ -1.39
Cd28P31041 Gm45475-201ENSMUST00000209381 309 ntBASIC6.38□□□□□ -1.39
Cd28P31041 Gm45283-201ENSMUST00000210593 628 ntBASIC6.38□□□□□ -1.39
Cd28P31041 Gm45842-201ENSMUST00000211876 753 ntTSL 3 BASIC6.38□□□□□ -1.39
Cd28P31041 AC119987.1-201ENSMUST00000212316 848 ntBASIC6.38□□□□□ -1.39
Cd28P31041 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC6.38□□□□□ -1.39
Cd28P31041 Gm45925-202ENSMUST00000219904 1136 ntBASIC6.38□□□□□ -1.39
Cd28P31041 AL590616.1-201ENSMUST00000223339 574 ntBASIC6.38□□□□□ -1.39
Cd28P31041 AC146596.1-201ENSMUST00000223507 223 ntBASIC6.38□□□□□ -1.39
Cd28P31041 Cthrc1-204ENSMUST00000226433 596 ntBASIC6.38□□□□□ -1.39
Cd28P31041 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cd28P31041 Wdr61-201ENSMUST00000051822 1187 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cd28P31041 Olfr466-201ENSMUST00000058907 927 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Cd28P31041 Gm10697-201ENSMUST00000091692 1023 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Cd28P31041 Tdpoz5-201ENSMUST00000098879 1023 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Cd28P31041 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cd28P31041 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cd28P31041 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC6.38□□□□□ -1.39
Cd28P31041 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cd28P31041 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Cd28P31041 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Cd28P31041 Gm12346-201ENSMUST00000121455 2255 ntBASIC6.38□□□□□ -1.39
Cd28P31041 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cd28P31041 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC6.38□□□□□ -1.39
Cd28P31041 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cd28P31041 AC122346.1-201ENSMUST00000225266 3732 ntBASIC6.38□□□□□ -1.39
Cd28P31041 Gm37945-201ENSMUST00000192536 4367 ntBASIC6.38□□□□□ -1.39
Cd28P31041 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC6.38□□□□□ -1.39
Cd28P31041 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cd28P31041 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Cd28P31041 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
Cd28P31041 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Cd28P31041 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Cd28P31041 Gm8257-202ENSMUST00000169583 1749 ntAPPRIS P5 TSL 5 BASIC6.37□□□□□ -1.39
Cd28P31041 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cd28P31041 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cd28P31041 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC6.37□□□□□ -1.39
Cd28P31041 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Cd28P31041 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cd28P31041 Gm29601-201ENSMUST00000187961 1349 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms