Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC6.09□□□□□ -1.44
Cdx1P18111 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Cdx1P18111 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Cdx1P18111 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Cdx1P18111 Gm37685-201ENSMUST00000193507 2177 ntBASIC6.08□□□□□ -1.44
Cdx1P18111 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdx1P18111 Gm14280-201ENSMUST00000138080 1444 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdx1P18111 Siae-204ENSMUST00000215474 4947 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdx1P18111 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdx1P18111 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Cdx1P18111 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdx1P18111 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC6.08□□□□□ -1.44
Cdx1P18111 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC6.08□□□□□ -1.44
Cdx1P18111 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Cdx1P18111 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdx1P18111 CT009757.6-201ENSMUST00000220661 2312 ntBASIC6.08□□□□□ -1.44
Cdx1P18111 Ipcef1-201ENSMUST00000078070 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdx1P18111 Csnk1g1-204ENSMUST00000130798 1648 ntTSL 5 BASIC6.08□□□□□ -1.44
Cdx1P18111 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Cdx1P18111 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdx1P18111 Ap5s1-202ENSMUST00000110206 703 ntTSL 3 BASIC6.08□□□□□ -1.44
Cdx1P18111 Gm7091-201ENSMUST00000116438 586 ntBASIC6.08□□□□□ -1.44
Cdx1P18111 Gm14032-201ENSMUST00000117686 1026 ntBASIC6.08□□□□□ -1.44
Cdx1P18111 Gm12189-201ENSMUST00000119779 912 ntBASIC6.08□□□□□ -1.44
Cdx1P18111 Snhg17-202ENSMUST00000138592 342 ntTSL 2 BASIC6.08□□□□□ -1.44
Cdx1P18111 Gm15124-201ENSMUST00000142053 953 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdx1P18111 Gm24899-201ENSMUST00000158892 73 ntBASIC6.08□□□□□ -1.44
Cdx1P18111 Gm20627-202ENSMUST00000176275 564 ntTSL 5 BASIC6.08□□□□□ -1.44
Cdx1P18111 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdx1P18111 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdx1P18111 Mir7060-201ENSMUST00000183486 137 ntBASIC6.08□□□□□ -1.44
Cdx1P18111 Mir6912-201ENSMUST00000184456 70 ntBASIC6.08□□□□□ -1.44
Cdx1P18111 Gm18970-201ENSMUST00000186040 938 ntBASIC6.08□□□□□ -1.44
Cdx1P18111 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC6.08□□□□□ -1.44
Cdx1P18111 1700100L14Rik-202ENSMUST00000189028 762 ntTSL 2 BASIC6.08□□□□□ -1.44
Cdx1P18111 Tdpoz2-201ENSMUST00000191960 1145 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Cdx1P18111 Gm38242-201ENSMUST00000192354 430 ntTSL 5 BASIC6.08□□□□□ -1.44
Cdx1P18111 Gm37662-201ENSMUST00000195649 667 ntTSL 2 BASIC6.08□□□□□ -1.44
Cdx1P18111 Gm43782-201ENSMUST00000202790 229 ntTSL 3 BASIC6.08□□□□□ -1.44
Cdx1P18111 Gm6308-201ENSMUST00000203226 313 ntBASIC6.08□□□□□ -1.44
Cdx1P18111 Gm43952-201ENSMUST00000203765 751 ntBASIC6.08□□□□□ -1.44
Cdx1P18111 Nbdy-206ENSMUST00000208373 1061 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Cdx1P18111 E230032D23Rik-203ENSMUST00000208797 856 ntBASIC6.08□□□□□ -1.44
Cdx1P18111 CT030709.1-201ENSMUST00000214443 443 ntTSL 5 BASIC6.08□□□□□ -1.44
Cdx1P18111 AC172989.1-201ENSMUST00000226387 513 ntBASIC6.08□□□□□ -1.44
Cdx1P18111 AC107711.5-201ENSMUST00000228149 594 ntBASIC6.08□□□□□ -1.44
Cdx1P18111 CT025630.3-201ENSMUST00000228798 835 ntBASIC6.08□□□□□ -1.44
Cdx1P18111 Tmem213-201ENSMUST00000031851 631 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdx1P18111 Gm4871-201ENSMUST00000071421 1119 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdx1P18111 Olfr412-201ENSMUST00000077794 939 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Cdx1P18111 Olfr2-201ENSMUST00000094109 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdx1P18111 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdx1P18111 Psg-ps1-201ENSMUST00000165490 1574 ntBASIC6.08□□□□□ -1.44
Cdx1P18111 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Cdx1P18111 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdx1P18111 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC6.08□□□□□ -1.44
Cdx1P18111 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdx1P18111 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdx1P18111 Gm37911-201ENSMUST00000193099 1545 ntBASIC6.08□□□□□ -1.44
Cdx1P18111 CT009711.1-201ENSMUST00000223992 3040 ntBASIC6.08□□□□□ -1.44
Cdx1P18111 Zfp473-201ENSMUST00000060270 3800 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdx1P18111 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Cdx1P18111 Gm43497-201ENSMUST00000201137 2316 ntBASIC6.08□□□□□ -1.44
Cdx1P18111 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Cdx1P18111 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Cdx1P18111 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdx1P18111 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC6.08□□□□□ -1.44
Cdx1P18111 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdx1P18111 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Cdx1P18111 CT009718.2-201ENSMUST00000221408 1428 ntTSL 5 BASIC6.08□□□□□ -1.44
Cdx1P18111 Zfp958-201ENSMUST00000073201 1401 ntTSL 5 BASIC6.08□□□□□ -1.44
Cdx1P18111 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Cdx1P18111 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Cdx1P18111 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Cdx1P18111 Gm17821-201ENSMUST00000223448 1693 ntBASIC6.07□□□□□ -1.44
Cdx1P18111 Kng1-203ENSMUST00000089902 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Cdx1P18111 Cmah-208ENSMUST00000224819 9482 ntBASIC6.07□□□□□ -1.44
Cdx1P18111 Gm43577-201ENSMUST00000197090 3344 ntBASIC6.07□□□□□ -1.44
Cdx1P18111 A330076C08Rik-202ENSMUST00000223513 1937 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Cdx1P18111 CT025535.2-201ENSMUST00000228572 7441 ntBASIC6.07□□□□□ -1.44
Cdx1P18111 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Cdx1P18111 Spef2-205ENSMUST00000162780 1639 ntTSL 5 BASIC6.07□□□□□ -1.44
Cdx1P18111 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Cdx1P18111 Csnk1g1-209ENSMUST00000205379 4001 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
Cdx1P18111 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Cdx1P18111 Gm12430-201ENSMUST00000121539 1322 ntBASIC6.07□□□□□ -1.44
Cdx1P18111 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC6.07□□□□□ -1.44
Cdx1P18111 Tmem175-201ENSMUST00000063272 3956 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Cdx1P18111 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Cdx1P18111 Sp100-210ENSMUST00000147552 1597 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Cdx1P18111 Gm14245-201ENSMUST00000118939 1843 ntBASIC6.07□□□□□ -1.44
Cdx1P18111 AC139941.2-201ENSMUST00000221565 1824 ntBASIC6.07□□□□□ -1.44
Cdx1P18111 Gm44255-201ENSMUST00000203456 2053 ntBASIC6.07□□□□□ -1.44
Cdx1P18111 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Cdx1P18111 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Cdx1P18111 Gm16409-201ENSMUST00000100510 747 ntBASIC6.07□□□□□ -1.44
Cdx1P18111 Gm5530-201ENSMUST00000117185 985 ntBASIC6.07□□□□□ -1.44
Cdx1P18111 Gm13682-201ENSMUST00000117524 702 ntBASIC6.07□□□□□ -1.44
Cdx1P18111 Gm14645-201ENSMUST00000118597 417 ntBASIC6.07□□□□□ -1.44
Cdx1P18111 Gm11796-201ENSMUST00000120208 972 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms