Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm38075-201ENSMUST00000191979 920 ntBASIC6.87□□□□□ -1.31
Hoxd3P09027 2610105M22Rik-201ENSMUST00000193707 1153 ntBASIC6.87□□□□□ -1.31
Hoxd3P09027 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC6.87□□□□□ -1.31
Hoxd3P09027 Gm37526-201ENSMUST00000194640 619 ntBASIC6.87□□□□□ -1.31
Hoxd3P09027 Gm38358-201ENSMUST00000195144 428 ntBASIC6.87□□□□□ -1.31
Hoxd3P09027 Gm17978-201ENSMUST00000195986 769 ntBASIC6.87□□□□□ -1.31
Hoxd3P09027 Gm2404-201ENSMUST00000196197 844 ntBASIC6.87□□□□□ -1.31
Hoxd3P09027 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 Gm43694-201ENSMUST00000200773 1119 ntBASIC6.87□□□□□ -1.31
Hoxd3P09027 Gm42887-201ENSMUST00000202469 1119 ntBASIC6.87□□□□□ -1.31
Hoxd3P09027 Gm44023-201ENSMUST00000203710 469 ntBASIC6.87□□□□□ -1.31
Hoxd3P09027 Clec4n-206ENSMUST00000205129 363 ntTSL 5 BASIC6.87□□□□□ -1.31
Hoxd3P09027 AC164105.1-202ENSMUST00000213920 999 ntTSL 5 BASIC6.87□□□□□ -1.31
Hoxd3P09027 AC108846.3-201ENSMUST00000214078 247 ntTSL 5 BASIC6.87□□□□□ -1.31
Hoxd3P09027 AC114645.2-201ENSMUST00000214308 791 ntTSL 3 BASIC6.87□□□□□ -1.31
Hoxd3P09027 Cd24a-202ENSMUST00000214476 743 ntAPPRIS ALT2 TSL 3 BASIC6.87□□□□□ -1.31
Hoxd3P09027 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC6.87□□□□□ -1.31
Hoxd3P09027 AC133087.1-201ENSMUST00000221837 148 ntBASIC6.87□□□□□ -1.31
Hoxd3P09027 AC124687.4-201ENSMUST00000222361 463 ntTSL 5 BASIC6.87□□□□□ -1.31
Hoxd3P09027 Gm3565-201ENSMUST00000222670 609 ntBASIC6.87□□□□□ -1.31
Hoxd3P09027 CU074400.1-201ENSMUST00000224411 220 ntBASIC6.87□□□□□ -1.31
Hoxd3P09027 CT010475.1-201ENSMUST00000224753 526 ntBASIC6.87□□□□□ -1.31
Hoxd3P09027 AC123692.2-201ENSMUST00000226272 342 ntBASIC6.87□□□□□ -1.31
Hoxd3P09027 AC132317.2-201ENSMUST00000227301 519 ntBASIC6.87□□□□□ -1.31
Hoxd3P09027 Sbp-201ENSMUST00000024940 833 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 Yipf7-201ENSMUST00000031045 1219 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 Dmrtc1a-201ENSMUST00000033686 1247 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC6.87□□□□□ -1.31
Hoxd3P09027 Gm9234-201ENSMUST00000077747 492 ntBASIC6.87□□□□□ -1.31
Hoxd3P09027 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Hoxd3P09027 Gm26111-201ENSMUST00000083969 106 ntBASIC6.87□□□□□ -1.31
Hoxd3P09027 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Hoxd3P09027 Sfmbt1-202ENSMUST00000112184 2936 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Hoxd3P09027 Hip1-201ENSMUST00000060311 7835 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 Vmn1r26-203ENSMUST00000228070 4419 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Hoxd3P09027 Homer1-201ENSMUST00000060490 2765 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 Gng7-202ENSMUST00000099462 3425 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 Inpp5d-210ENSMUST00000169754 4937 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 AC154300.1-201ENSMUST00000219735 2627 ntTSL 5 BASIC6.87□□□□□ -1.31
Hoxd3P09027 Zfp57-212ENSMUST00000174672 2597 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 Grin2a-206ENSMUST00000199708 14634 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Hoxd3P09027 Olfr1506-201ENSMUST00000213994 2495 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
Hoxd3P09027 Thbs3-201ENSMUST00000029682 3190 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 Sulf2-207ENSMUST00000146497 3808 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Hoxd3P09027 Dcx-202ENSMUST00000087313 3120 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 Tspan7-201ENSMUST00000076354 1733 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 Wdr89-202ENSMUST00000187307 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 Frrs1-201ENSMUST00000040260 2377 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 Rimbp2-202ENSMUST00000196085 3732 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Hoxd3P09027 Pttg1-204ENSMUST00000117446 1674 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 Aplnr-201ENSMUST00000057019 3699 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Hoxd3P09027 1700028E10Rik-203ENSMUST00000201142 2310 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 Sla2-201ENSMUST00000029164 2973 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 Gpr83-202ENSMUST00000115624 2937 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 Ccdc28a-201ENSMUST00000052648 2255 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Hoxd3P09027 Ednrb-201ENSMUST00000022718 4107 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 Gramd4-201ENSMUST00000088931 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 AI506816-205ENSMUST00000199941 2804 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 Gm42601-201ENSMUST00000197025 1541 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 Cd163-202ENSMUST00000112541 4443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 Lrrc23-201ENSMUST00000032218 1470 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Hoxd3P09027 Cat-201ENSMUST00000028610 2613 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 Zfp592-201ENSMUST00000107353 7297 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 Lmod2-201ENSMUST00000031694 1976 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 Gm15496-201ENSMUST00000129578 2456 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC6.86□□□□□ -1.31
Hoxd3P09027 AC147250.1-201ENSMUST00000224781 1364 ntBASIC6.86□□□□□ -1.31
Hoxd3P09027 Bfar-202ENSMUST00000069281 2456 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 Sgpl1-201ENSMUST00000092498 4070 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 Nr1i3-208ENSMUST00000155126 2980 ntTSL 2 BASIC6.86□□□□□ -1.31
Hoxd3P09027 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 Oprl1-201ENSMUST00000071585 2999 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 Gm45767-201ENSMUST00000212778 4561 ntBASIC6.86□□□□□ -1.31
Hoxd3P09027 AC160550.2-202ENSMUST00000227812 1861 ntBASIC6.86□□□□□ -1.31
Hoxd3P09027 Apex2-201ENSMUST00000026303 1884 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 AA986860-201ENSMUST00000039323 2909 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 Gm19024-201ENSMUST00000194681 1319 ntBASIC6.86□□□□□ -1.31
Hoxd3P09027 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Hoxd3P09027 Mir704-201ENSMUST00000102106 77 ntBASIC6.86□□□□□ -1.31
Hoxd3P09027 n-R5s90-201ENSMUST00000103968 118 ntBASIC6.86□□□□□ -1.31
Hoxd3P09027 Gm23133-201ENSMUST00000104255 135 ntBASIC6.86□□□□□ -1.31
Hoxd3P09027 Gm8832-201ENSMUST00000119890 395 ntBASIC6.86□□□□□ -1.31
Hoxd3P09027 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 1700056N10Rik-201ENSMUST00000141875 1043 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 4933406J10Rik-201ENSMUST00000144828 963 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 Gm15864-201ENSMUST00000145950 369 ntTSL 3 BASIC6.86□□□□□ -1.31
Hoxd3P09027 Gm13405-201ENSMUST00000146769 708 ntTSL 3 BASIC6.86□□□□□ -1.31
Hoxd3P09027 Gm14573-201ENSMUST00000150544 451 ntTSL 2 BASIC6.86□□□□□ -1.31
Hoxd3P09027 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC6.86□□□□□ -1.31
Hoxd3P09027 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC6.86□□□□□ -1.31
Hoxd3P09027 Gm24039-201ENSMUST00000157878 132 ntBASIC6.86□□□□□ -1.31
Hoxd3P09027 Gm23025-201ENSMUST00000158769 111 ntBASIC6.86□□□□□ -1.31
Hoxd3P09027 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Hoxd3P09027 Gm15914-201ENSMUST00000161922 309 ntBASIC6.86□□□□□ -1.31
Hoxd3P09027 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Hoxd3P09027 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Hoxd3P09027 Adgrg4-206ENSMUST00000168724 531 ntBASIC6.86□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms