Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Mybpc2-201ENSMUST00000165208 3611 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Gm21043-201ENSMUST00000199316 1517 ntBASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Dync1h1-201ENSMUST00000018851 14342 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Vmn2r8-201ENSMUST00000172140 2547 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Htr4-201ENSMUST00000027560 4657 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Arhgap21-208ENSMUST00000141298 6339 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Cep57l1-205ENSMUST00000187143 1769 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Gm12439-201ENSMUST00000117162 365 ntBASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Gm13940-201ENSMUST00000121023 301 ntBASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Gm4886-201ENSMUST00000121874 1176 ntBASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Gm11341-201ENSMUST00000122316 447 ntBASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Gm14747-201ENSMUST00000149888 984 ntBASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Mir1929-201ENSMUST00000158635 93 ntBASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Gm7694-201ENSMUST00000179801 3827 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Cbx3-ps6-201ENSMUST00000181108 552 ntBASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Gm30517-201ENSMUST00000197350 772 ntBASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Gm44571-201ENSMUST00000208092 533 ntBASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Cbx3-ps7-201ENSMUST00000081455 552 ntBASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Zfp280d-217ENSMUST00000184517 3919 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Tmem170b-201ENSMUST00000129449 7168 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Sfmbt1-204ENSMUST00000227303 2960 ntBASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Inpp1-201ENSMUST00000027271 5767 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Wdr76-203ENSMUST00000110602 4170 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Apod-203ENSMUST00000130560 2074 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Col4a6B1AVK5 Gm37372-201ENSMUST00000193577 3311 ntBASIC7.59□□□□□ -1.2
Col4a6B1AVK5 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC7.59□□□□□ -1.2
Col4a6B1AVK5 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.2
Col4a6B1AVK5 Col4a4-201ENSMUST00000087050 10108 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
Col4a6B1AVK5 Adam22-204ENSMUST00000088761 9077 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.2
Col4a6B1AVK5 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.2
Col4a6B1AVK5 Nolc1-203ENSMUST00000223728 3523 ntAPPRIS ALT2 BASIC7.59□□□□□ -1.2
Col4a6B1AVK5 Plxdc2-201ENSMUST00000028081 6947 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col4a6B1AVK5 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Col4a6B1AVK5 Chid1-207ENSMUST00000153191 4182 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col4a6B1AVK5 Gm37159-201ENSMUST00000192720 3605 ntBASIC7.58□□□□□ -1.2
Col4a6B1AVK5 AC122426.2-201ENSMUST00000216522 2947 ntBASIC7.58□□□□□ -1.2
Col4a6B1AVK5 Gm22370-201ENSMUST00000102422 83 ntBASIC7.58□□□□□ -1.2
Col4a6B1AVK5 Gm13196-201ENSMUST00000118297 379 ntBASIC7.58□□□□□ -1.2
Col4a6B1AVK5 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC7.58□□□□□ -1.2
Col4a6B1AVK5 Gm24286-201ENSMUST00000157632 128 ntBASIC7.58□□□□□ -1.2
Col4a6B1AVK5 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Col4a6B1AVK5 Mir3078-201ENSMUST00000175231 87 ntBASIC7.58□□□□□ -1.2
Col4a6B1AVK5 Gm9285-201ENSMUST00000177691 697 ntBASIC7.58□□□□□ -1.2
Col4a6B1AVK5 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Col4a6B1AVK5 Gm18799-201ENSMUST00000189104 913 ntBASIC7.58□□□□□ -1.2
Col4a6B1AVK5 Gm7867-201ENSMUST00000189856 546 ntBASIC7.58□□□□□ -1.2
Col4a6B1AVK5 Gm37669-201ENSMUST00000192184 820 ntBASIC7.58□□□□□ -1.2
Col4a6B1AVK5 Gm42752-201ENSMUST00000198394 1106 ntBASIC7.58□□□□□ -1.2
Col4a6B1AVK5 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC7.58□□□□□ -1.2
Col4a6B1AVK5 Gm2221-201ENSMUST00000209342 418 ntBASIC7.58□□□□□ -1.2
Col4a6B1AVK5 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC7.58□□□□□ -1.2
Col4a6B1AVK5 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC7.58□□□□□ -1.2
Col4a6B1AVK5 Cryab-203ENSMUST00000214962 846 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col4a6B1AVK5 AC156574.1-201ENSMUST00000227084 452 ntBASIC7.58□□□□□ -1.2
Col4a6B1AVK5 AC114572.1-201ENSMUST00000227262 300 ntBASIC7.58□□□□□ -1.2
Col4a6B1AVK5 AC135086.1-201ENSMUST00000228621 817 ntBASIC7.58□□□□□ -1.2
Col4a6B1AVK5 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
Col4a6B1AVK5 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Col4a6B1AVK5 Gm28317-201ENSMUST00000187200 2166 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Col4a6B1AVK5 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Col4a6B1AVK5 Gm28254-201ENSMUST00000189207 2166 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Col4a6B1AVK5 Gm29063-201ENSMUST00000190236 2166 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Col4a6B1AVK5 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Col4a6B1AVK5 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col4a6B1AVK5 Zkscan5-201ENSMUST00000031601 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col4a6B1AVK5 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col4a6B1AVK5 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
Col4a6B1AVK5 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
Col4a6B1AVK5 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col4a6B1AVK5 Pdgfrb-202ENSMUST00000115274 5423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Col4a6B1AVK5 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms