Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 AC159205.7-201ENSMUST00000225988 692 ntBASIC7.07□□□□□ -1.28
Trim3Q9R1R2 AC139569.1-201ENSMUST00000226080 614 ntBASIC7.07□□□□□ -1.28
Trim3Q9R1R2 CT009556.3-201ENSMUST00000226173 513 ntBASIC7.07□□□□□ -1.28
Trim3Q9R1R2 AC099629.1-201ENSMUST00000226778 464 ntBASIC7.07□□□□□ -1.28
Trim3Q9R1R2 1700123O20Rik-203ENSMUST00000227269 893 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Gm10123-201ENSMUST00000075723 490 ntBASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Gm6054-201ENSMUST00000078052 378 ntBASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Defa35-201ENSMUST00000078121 398 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Gm20731-201ENSMUST00000193462 2288 ntBASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim3Q9R1R2 AC135119.1-202ENSMUST00000228435 2203 ntBASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Gm44553-201ENSMUST00000206316 2037 ntBASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim3Q9R1R2 AC158799.1-204ENSMUST00000217441 1321 ntTSL 5 BASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Gm6729-201ENSMUST00000165173 1452 ntBASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Gm13301-201ENSMUST00000121728 2446 ntBASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Igkv1-117-201ENSMUST00000103317 404 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Gm12024-201ENSMUST00000118819 1253 ntBASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Ino80c-202ENSMUST00000125169 756 ntTSL 3 BASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Gm13857-202ENSMUST00000141091 617 ntTSL 3 BASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Gm20452-201ENSMUST00000174686 513 ntBASIC7.06□□□□□ -1.28
Trim3Q9R1R2 1700030F04Rik-202ENSMUST00000188781 617 ntTSL 5 BASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Gm18131-201ENSMUST00000199241 449 ntBASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Gm42696-201ENSMUST00000199859 1142 ntBASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Gm45509-201ENSMUST00000209624 1229 ntBASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Gm46323-201ENSMUST00000223136 628 ntTSL 5 BASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Defb3-201ENSMUST00000033852 275 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim3Q9R1R2 4930556J24Rik-201ENSMUST00000042344 1220 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Prh1-201ENSMUST00000074042 819 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Olfr224-201ENSMUST00000081102 945 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Klrk1-202ENSMUST00000095412 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Gm17199-201ENSMUST00000097296 416 ntBASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Dph5-201ENSMUST00000043342 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Dis3l-202ENSMUST00000113890 3224 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Gm37080-201ENSMUST00000194804 2404 ntBASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Ankrd55-203ENSMUST00000165593 2749 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Trim3Q9R1R2 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Gm28651-202ENSMUST00000227968 2693 ntBASIC7.05□□□□□ -1.28
Trim3Q9R1R2 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC7.05□□□□□ -1.28
Trim3Q9R1R2 AI182371-207ENSMUST00000226972 1642 ntAPPRIS ALT2 BASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Atxn7l1-201ENSMUST00000077456 1624 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Rnase4-202ENSMUST00000169895 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Gm43747-201ENSMUST00000201412 1330 ntBASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Gm43961-201ENSMUST00000203289 1872 ntBASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim3Q9R1R2 CT009711.1-201ENSMUST00000223992 3040 ntBASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Skint7-204ENSMUST00000163281 1423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Cisd3-202ENSMUST00000107584 546 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Gmfg-202ENSMUST00000108289 477 ntTSL 3 BASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Gm15209-201ENSMUST00000117703 400 ntBASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Gm13858-201ENSMUST00000118862 671 ntBASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Gm11809-201ENSMUST00000120923 950 ntBASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Gm11688-201ENSMUST00000122145 308 ntBASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Gm13828-201ENSMUST00000122278 363 ntBASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Gm15843-201ENSMUST00000146593 529 ntBASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Gm6838-201ENSMUST00000172851 582 ntBASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Trav7n-6-201ENSMUST00000178100 381 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Gm6176-201ENSMUST00000178209 906 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Gm4567-201ENSMUST00000178591 906 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Gm10668-201ENSMUST00000179491 906 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Ets1-205ENSMUST00000184364 678 ntTSL 5 BASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Gm28888-201ENSMUST00000186556 316 ntTSL 3 BASIC7.05□□□□□ -1.28
Trim3Q9R1R2 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms