Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
Upk3aQ9JKX8 Gm26512-201ENSMUST00000181874 3042 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Upk3aQ9JKX8 AC107453.1-201ENSMUST00000227490 3268 ntBASIC7.15□□□□□ -1.27
Upk3aQ9JKX8 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.27
Upk3aQ9JKX8 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Upk3aQ9JKX8 Gm44797-201ENSMUST00000208780 1837 ntBASIC7.15□□□□□ -1.27
Upk3aQ9JKX8 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
Upk3aQ9JKX8 Gm16204-201ENSMUST00000117864 1897 ntBASIC7.15□□□□□ -1.27
Upk3aQ9JKX8 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC7.15□□□□□ -1.27
Upk3aQ9JKX8 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Upk3aQ9JKX8 B3gnt5-207ENSMUST00000164397 4872 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Upk3aQ9JKX8 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Upk3aQ9JKX8 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Upk3aQ9JKX8 Papss2-201ENSMUST00000025833 3635 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Upk3aQ9JKX8 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Upk3aQ9JKX8 Gm43766-201ENSMUST00000200590 5417 ntBASIC7.14□□□□□ -1.27
Upk3aQ9JKX8 Gm24048-201ENSMUST00000102411 106 ntBASIC7.14□□□□□ -1.27
Upk3aQ9JKX8 Nt5dc1-203ENSMUST00000105512 2727 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Upk3aQ9JKX8 Nsun6-204ENSMUST00000114715 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Upk3aQ9JKX8 Gm7129-201ENSMUST00000117402 997 ntBASIC7.14□□□□□ -1.27
Upk3aQ9JKX8 Gm11320-201ENSMUST00000119434 463 ntBASIC7.14□□□□□ -1.27
Upk3aQ9JKX8 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC7.14□□□□□ -1.27
Upk3aQ9JKX8 Gm11850-201ENSMUST00000119679 479 ntBASIC7.14□□□□□ -1.27
Upk3aQ9JKX8 Zfp455-202ENSMUST00000120861 2712 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
Upk3aQ9JKX8 Gm14787-201ENSMUST00000121236 388 ntBASIC7.14□□□□□ -1.27
Upk3aQ9JKX8 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Upk3aQ9JKX8 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC7.14□□□□□ -1.27
Upk3aQ9JKX8 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC7.14□□□□□ -1.27
Upk3aQ9JKX8 Gm25277-201ENSMUST00000157266 324 ntBASIC7.14□□□□□ -1.27
Upk3aQ9JKX8 Gm23222-201ENSMUST00000158117 76 ntBASIC7.14□□□□□ -1.27
Upk3aQ9JKX8 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
Upk3aQ9JKX8 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Upk3aQ9JKX8 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC7.14□□□□□ -1.27
Upk3aQ9JKX8 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC7.14□□□□□ -1.27
Upk3aQ9JKX8 Gm27019-201ENSMUST00000183056 404 ntBASIC7.14□□□□□ -1.27
Upk3aQ9JKX8 Gm37460-201ENSMUST00000191796 2249 ntBASIC7.14□□□□□ -1.27
Upk3aQ9JKX8 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC7.14□□□□□ -1.27
Upk3aQ9JKX8 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Upk3aQ9JKX8 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC7.14□□□□□ -1.27
Upk3aQ9JKX8 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Upk3aQ9JKX8 Gm45888-201ENSMUST00000212348 1229 ntBASIC7.14□□□□□ -1.27
Upk3aQ9JKX8 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Upk3aQ9JKX8 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC7.14□□□□□ -1.27
Upk3aQ9JKX8 Cdon-201ENSMUST00000042842 7213 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Upk3aQ9JKX8 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Upk3aQ9JKX8 Defa37-201ENSMUST00000084040 403 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Upk3aQ9JKX8 Olfr1424-201ENSMUST00000087830 942 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Upk3aQ9JKX8 Abcc9-202ENSMUST00000087527 6213 ntAPPRIS P5 TSL 1 (best) BASIC7.14□□□□□ -1.27
Upk3aQ9JKX8 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
Upk3aQ9JKX8 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Upk3aQ9JKX8 Gm37043-201ENSMUST00000194609 3105 ntBASIC7.14□□□□□ -1.27
Upk3aQ9JKX8 Gm37520-201ENSMUST00000194883 2672 ntBASIC7.14□□□□□ -1.27
Upk3aQ9JKX8 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 Akr1c19-202ENSMUST00000118663 5832 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 9930111J21Rik1-202ENSMUST00000097494 3863 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 Gm43168-201ENSMUST00000201039 1612 ntBASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 4933406L23Rik-201ENSMUST00000203567 1509 ntBASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 AC166574.5-201ENSMUST00000227438 1432 ntBASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 Peak1-201ENSMUST00000061552 6996 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 CT025639.1-201ENSMUST00000223906 1375 ntBASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 Gm37891-201ENSMUST00000195585 1326 ntBASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 Gm11880-201ENSMUST00000117612 399 ntBASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 Gm13545-201ENSMUST00000119044 482 ntBASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 Gm14465-201ENSMUST00000120603 567 ntBASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 Gm22262-201ENSMUST00000158713 86 ntBASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 Gm16580-201ENSMUST00000162696 1044 ntBASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 Gm8305-201ENSMUST00000180022 1195 ntBASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 Gm27218-201ENSMUST00000183745 392 ntBASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 Gm28142-201ENSMUST00000186899 698 ntBASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 Gm20917-202ENSMUST00000188706 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 Gm5575-201ENSMUST00000190879 398 ntBASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 Gm37295-201ENSMUST00000192186 109 ntBASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 Gm43555-201ENSMUST00000196588 310 ntBASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 Mrpl24-201ENSMUST00000019854 1226 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 Gm42573-201ENSMUST00000202327 478 ntBASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 Gm29977-201ENSMUST00000206804 724 ntBASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 AC160338.3-201ENSMUST00000214836 384 ntBASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 AC124778.1-201ENSMUST00000216013 162 ntBASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 AC173482.3-201ENSMUST00000225492 1212 ntBASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 Epha4-201ENSMUST00000027451 6328 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 Akap13-201ENSMUST00000166315 12543 ntAPPRIS P2 TSL 5 BASIC7.13□□□□□ -1.27
Upk3aQ9JKX8 Ccdc150-201ENSMUST00000027128 3807 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms