Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Eya3-213ENSMUST00000180250 5020 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Gm29077-201ENSMUST00000185784 2169 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Gm28696-201ENSMUST00000189187 2169 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Gm28206-201ENSMUST00000190437 2169 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Gm37657-201ENSMUST00000195425 2169 ntTSL 5 BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Adamtsl1-203ENSMUST00000107178 7839 ntAPPRIS P2 TSL 5 BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Pla2r1-201ENSMUST00000112525 7112 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Plekhg1-202ENSMUST00000120274 7369 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 4933402E13Rik-201ENSMUST00000051414 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Cyp19a1-203ENSMUST00000215736 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Muc13-202ENSMUST00000115044 2969 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Gm26629-201ENSMUST00000180848 2276 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Gm24142-201ENSMUST00000101960 107 ntBASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Gm23946-201ENSMUST00000104423 197 ntBASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Stmn1-202ENSMUST00000105867 802 ntTSL 5 BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Gm12648-201ENSMUST00000126270 656 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Gm12158-201ENSMUST00000130493 631 ntTSL 3 BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Gm22226-201ENSMUST00000157355 109 ntBASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Zfp661-204ENSMUST00000164551 1284 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Gm17122-201ENSMUST00000166047 372 ntTSL 5 BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Gm28208-201ENSMUST00000185941 1157 ntTSL 5 BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Gm38261-201ENSMUST00000192608 316 ntBASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Gm37979-201ENSMUST00000193065 712 ntBASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Slamf6-204ENSMUST00000194561 984 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Ceacam-ps1-201ENSMUST00000205380 794 ntTSL 2 BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 AC153957.1-201ENSMUST00000215235 229 ntBASIC9.74□□□□□ -0.85
Ube3bQ9ES34 4930471E19Rik-202ENSMUST00000219150 737 ntTSL 3 BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 AC125190.2-201ENSMUST00000221160 497 ntBASIC9.74□□□□□ -0.85
Ube3bQ9ES34 AC115735.3-201ENSMUST00000227757 513 ntBASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Spp2-201ENSMUST00000027518 928 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Lcn11-201ENSMUST00000091278 652 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 A630095E13Rik-201ENSMUST00000093868 619 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Runx1t1-202ENSMUST00000098256 3317 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Gm45289-201ENSMUST00000211048 2577 ntBASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Btk-202ENSMUST00000113213 2121 ntTSL 5 BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 D7Ertd443e-201ENSMUST00000094002 2908 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Crtam-201ENSMUST00000034519 1876 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Plec-202ENSMUST00000054449 15018 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 A630001G21Rik-201ENSMUST00000064788 1353 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Card11-201ENSMUST00000085786 4107 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Fam198b-201ENSMUST00000029567 6627 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Zfp292-201ENSMUST00000047950 9986 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Hrh1-203ENSMUST00000160780 2782 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Sfi1-210ENSMUST00000140846 3604 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Zim1-202ENSMUST00000122432 3060 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Hrh1-204ENSMUST00000161220 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ube3bQ9ES34 Gm17076-201ENSMUST00000165185 1401 ntBASIC9.73□□□□□ -0.85
Ube3bQ9ES34 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Zfp958-201ENSMUST00000073201 1401 ntTSL 5 BASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Cd200r4-201ENSMUST00000114626 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ube3bQ9ES34 AC154368.2-201ENSMUST00000222334 1724 ntBASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Clasp1-220ENSMUST00000191445 4914 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Ston1-205ENSMUST00000150023 3231 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Gm26719-201ENSMUST00000180395 3220 ntTSL 5 BASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Trim21-202ENSMUST00000106913 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Scn3b-201ENSMUST00000049941 4150 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Ttc37-201ENSMUST00000091466 5381 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Eps15l1-205ENSMUST00000212590 3376 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ube3bQ9ES34 2310001H17Rik-202ENSMUST00000181238 2237 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Gm13915-201ENSMUST00000119314 931 ntBASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Gm25266-201ENSMUST00000158521 304 ntBASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Gm7707-201ENSMUST00000165950 1156 ntBASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Gm8224-201ENSMUST00000166178 497 ntBASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Gm8974-201ENSMUST00000175770 479 ntBASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Trav9n-3-201ENSMUST00000177705 575 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Trav9d-3-201ENSMUST00000178252 575 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC9.73□□□□□ -0.85
Ube3bQ9ES34 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Gm8307-201ENSMUST00000187682 1150 ntBASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Gm6445-201ENSMUST00000189515 1112 ntBASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Gm38213-201ENSMUST00000193203 173 ntBASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Gm42952-206ENSMUST00000199324 506 ntTSL 3 BASIC9.73□□□□□ -0.85
Ube3bQ9ES34 9530013L04Rik-201ENSMUST00000203393 782 ntBASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Gm4536-201ENSMUST00000209157 542 ntBASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Gm18192-201ENSMUST00000210174 941 ntBASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Gm45756-201ENSMUST00000212491 407 ntBASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Gm34418-201ENSMUST00000212879 309 ntTSL 5 BASIC9.73□□□□□ -0.85
Ube3bQ9ES34 AC156560.1-201ENSMUST00000221425 256 ntBASIC9.73□□□□□ -0.85
Ube3bQ9ES34 AC163295.1-201ENSMUST00000227840 314 ntBASIC9.73□□□□□ -0.85
Ube3bQ9ES34 AC165437.1-201ENSMUST00000228640 536 ntBASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ube3bQ9ES34 1700018F24Rik-201ENSMUST00000031624 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Ube3bQ9ES34 6720489N17Rik-201ENSMUST00000091563 318 ntTSL 5 BASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Cyp4v3-201ENSMUST00000095328 3808 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Ube3bQ9ES34 Acly-207ENSMUST00000165111 4162 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 133.8 ms