Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Chmp4bQ9D8B3 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Chmp4bQ9D8B3 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Chmp4bQ9D8B3 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Chmp4bQ9D8B3 Gm11945-201ENSMUST00000120551 476 ntBASIC9.43□□□□□ -0.9
Chmp4bQ9D8B3 Gm11343-201ENSMUST00000120579 599 ntBASIC9.43□□□□□ -0.9
Chmp4bQ9D8B3 n-R5s47-201ENSMUST00000122516 119 ntBASIC9.43□□□□□ -0.9
Chmp4bQ9D8B3 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC9.43□□□□□ -0.9
Chmp4bQ9D8B3 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Chmp4bQ9D8B3 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Chmp4bQ9D8B3 0610012D04Rik-201ENSMUST00000159031 531 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Chmp4bQ9D8B3 Mir8095-201ENSMUST00000185103 129 ntBASIC9.43□□□□□ -0.9
Chmp4bQ9D8B3 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC9.43□□□□□ -0.9
Chmp4bQ9D8B3 Gm18351-201ENSMUST00000188646 883 ntBASIC9.43□□□□□ -0.9
Chmp4bQ9D8B3 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Chmp4bQ9D8B3 Gm5149-202ENSMUST00000199980 1250 ntTSL 2 BASIC9.43□□□□□ -0.9
Chmp4bQ9D8B3 Gm43235-201ENSMUST00000200121 297 ntBASIC9.43□□□□□ -0.9
Chmp4bQ9D8B3 AC163041.1-201ENSMUST00000221984 133 ntBASIC9.43□□□□□ -0.9
Chmp4bQ9D8B3 AC137950.1-201ENSMUST00000228553 515 ntBASIC9.43□□□□□ -0.9
Chmp4bQ9D8B3 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Chmp4bQ9D8B3 Olfr1032-201ENSMUST00000062166 933 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Chmp4bQ9D8B3 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Chmp4bQ9D8B3 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Chmp4bQ9D8B3 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Chmp4bQ9D8B3 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Chmp4bQ9D8B3 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Chmp4bQ9D8B3 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Chmp4bQ9D8B3 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Chmp4bQ9D8B3 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Chmp4bQ9D8B3 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Chmp4bQ9D8B3 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Chmp4bQ9D8B3 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC9.43□□□□□ -0.9
Chmp4bQ9D8B3 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Chmp4bQ9D8B3 Chn1os3-201ENSMUST00000147420 2707 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Chmp4bQ9D8B3 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chmp4bQ9D8B3 Coa7-202ENSMUST00000131656 3714 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chmp4bQ9D8B3 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Chmp4bQ9D8B3 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chmp4bQ9D8B3 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Chmp4bQ9D8B3 Gm42478-201ENSMUST00000199252 1467 ntBASIC9.42□□□□□ -0.9
Chmp4bQ9D8B3 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Chmp4bQ9D8B3 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Chmp4bQ9D8B3 Gm13313-201ENSMUST00000118938 1084 ntBASIC9.42□□□□□ -0.9
Chmp4bQ9D8B3 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC9.42□□□□□ -0.9
Chmp4bQ9D8B3 Gm14024-201ENSMUST00000141964 560 ntTSL 2 BASIC9.42□□□□□ -0.9
Chmp4bQ9D8B3 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC9.42□□□□□ -0.9
Chmp4bQ9D8B3 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Chmp4bQ9D8B3 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Chmp4bQ9D8B3 Gm31406-201ENSMUST00000192297 671 ntTSL 2 BASIC9.42□□□□□ -0.9
Chmp4bQ9D8B3 AC137678.1-201ENSMUST00000198370 118 ntBASIC9.42□□□□□ -0.9
Chmp4bQ9D8B3 Gm23604-202ENSMUST00000198428 137 ntBASIC9.42□□□□□ -0.9
Chmp4bQ9D8B3 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC9.42□□□□□ -0.9
Chmp4bQ9D8B3 Olfr1294-201ENSMUST00000208334 942 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Chmp4bQ9D8B3 Gm45432-201ENSMUST00000210391 416 ntBASIC9.42□□□□□ -0.9
Chmp4bQ9D8B3 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC9.42□□□□□ -0.9
Chmp4bQ9D8B3 Gm8058-201ENSMUST00000217247 587 ntBASIC9.42□□□□□ -0.9
Chmp4bQ9D8B3 CT010472.1-201ENSMUST00000224000 704 ntBASIC9.42□□□□□ -0.9
Chmp4bQ9D8B3 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chmp4bQ9D8B3 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC9.42□□□□□ -0.9
Chmp4bQ9D8B3 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chmp4bQ9D8B3 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC9.42□□□□□ -0.9
Chmp4bQ9D8B3 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Chmp4bQ9D8B3 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Chmp4bQ9D8B3 Olfr225-202ENSMUST00000213169 2658 ntAPPRIS P5 TSL 5 BASIC9.41□□□□□ -0.9
Chmp4bQ9D8B3 Rnase4-202ENSMUST00000169895 1460 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chmp4bQ9D8B3 4833407H14Rik-201ENSMUST00000180442 1485 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Chmp4bQ9D8B3 Gm15083-201ENSMUST00000138670 1413 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Chmp4bQ9D8B3 Gm37426-201ENSMUST00000195241 2470 ntBASIC9.41□□□□□ -0.9
Chmp4bQ9D8B3 Gm43681-201ENSMUST00000201581 1903 ntBASIC9.41□□□□□ -0.9
Chmp4bQ9D8B3 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Chmp4bQ9D8B3 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Chmp4bQ9D8B3 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chmp4bQ9D8B3 Gm9493-201ENSMUST00000104916 579 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Chmp4bQ9D8B3 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chmp4bQ9D8B3 4930483K19Rik-201ENSMUST00000127576 1237 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Chmp4bQ9D8B3 Snhg12-203ENSMUST00000128131 614 ntTSL 2 BASIC9.41□□□□□ -0.9
Chmp4bQ9D8B3 Gm25164-201ENSMUST00000158908 116 ntBASIC9.41□□□□□ -0.9
Chmp4bQ9D8B3 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC9.41□□□□□ -0.9
Chmp4bQ9D8B3 Gm5611-201ENSMUST00000164523 852 ntBASIC9.41□□□□□ -0.9
Chmp4bQ9D8B3 Mthfr-ps1-201ENSMUST00000174153 601 ntBASIC9.41□□□□□ -0.9
Chmp4bQ9D8B3 Gm22132-201ENSMUST00000175316 100 ntBASIC9.41□□□□□ -0.9
Chmp4bQ9D8B3 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Chmp4bQ9D8B3 Gm7200-201ENSMUST00000188426 1163 ntBASIC9.41□□□□□ -0.9
Chmp4bQ9D8B3 Gm28164-201ENSMUST00000190143 442 ntBASIC9.41□□□□□ -0.9
Chmp4bQ9D8B3 Gm37392-201ENSMUST00000192098 516 ntBASIC9.41□□□□□ -0.9
Chmp4bQ9D8B3 Gm18765-201ENSMUST00000203166 660 ntBASIC9.41□□□□□ -0.9
Chmp4bQ9D8B3 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Chmp4bQ9D8B3 Gm44786-201ENSMUST00000208165 1008 ntTSL 5 BASIC9.41□□□□□ -0.9
Chmp4bQ9D8B3 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Chmp4bQ9D8B3 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Chmp4bQ9D8B3 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC9.41□□□□□ -0.9
Chmp4bQ9D8B3 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
Chmp4bQ9D8B3 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chmp4bQ9D8B3 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Chmp4bQ9D8B3 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Chmp4bQ9D8B3 Gm42595-201ENSMUST00000196771 1607 ntBASIC9.41□□□□□ -0.9
Chmp4bQ9D8B3 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chmp4bQ9D8B3 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Chmp4bQ9D8B3 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Chmp4bQ9D8B3 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms