Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Smc1aQ9CU62 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Smc1aQ9CU62 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC8.41□□□□□ -1.06
Smc1aQ9CU62 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC8.41□□□□□ -1.06
Smc1aQ9CU62 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Smc1aQ9CU62 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Smc1aQ9CU62 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Smc1aQ9CU62 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Smc1aQ9CU62 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Smc1aQ9CU62 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC8.41□□□□□ -1.06
Smc1aQ9CU62 Ankrd49-201ENSMUST00000034406 1753 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Smc1aQ9CU62 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Smc1aQ9CU62 Enox2-204ENSMUST00000114914 3936 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Smc1aQ9CU62 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Smc1aQ9CU62 Gm5390-201ENSMUST00000119069 1230 ntBASIC8.41□□□□□ -1.06
Smc1aQ9CU62 Gm11809-201ENSMUST00000120923 950 ntBASIC8.41□□□□□ -1.06
Smc1aQ9CU62 Gm13726-201ENSMUST00000121278 794 ntBASIC8.41□□□□□ -1.06
Smc1aQ9CU62 Gm14612-201ENSMUST00000121522 881 ntBASIC8.41□□□□□ -1.06
Smc1aQ9CU62 Gm12517-201ENSMUST00000122082 425 ntBASIC8.41□□□□□ -1.06
Smc1aQ9CU62 Pla2g2a-203ENSMUST00000135748 788 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Smc1aQ9CU62 Mgst1-207ENSMUST00000140932 742 ntTSL 3 BASIC8.41□□□□□ -1.06
Smc1aQ9CU62 Gm13538-201ENSMUST00000143166 548 ntTSL 3 BASIC8.41□□□□□ -1.06
Smc1aQ9CU62 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC8.41□□□□□ -1.06
Smc1aQ9CU62 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Smc1aQ9CU62 Gm7502-201ENSMUST00000169235 733 ntBASIC8.41□□□□□ -1.06
Smc1aQ9CU62 Gm27595-201ENSMUST00000184579 112 ntBASIC8.41□□□□□ -1.06
Smc1aQ9CU62 Gm28573-201ENSMUST00000187821 380 ntBASIC8.41□□□□□ -1.06
Smc1aQ9CU62 1700122H20Rik-201ENSMUST00000188950 421 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Smc1aQ9CU62 Gm28145-201ENSMUST00000189742 380 ntBASIC8.41□□□□□ -1.06
Smc1aQ9CU62 Gm28400-201ENSMUST00000191332 380 ntBASIC8.41□□□□□ -1.06
Smc1aQ9CU62 Gm42760-201ENSMUST00000199814 311 ntBASIC8.41□□□□□ -1.06
Smc1aQ9CU62 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC8.41□□□□□ -1.06
Smc1aQ9CU62 Gm9110-201ENSMUST00000219035 617 ntBASIC8.41□□□□□ -1.06
Smc1aQ9CU62 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Smc1aQ9CU62 AC124450.1-201ENSMUST00000225569 495 ntBASIC8.41□□□□□ -1.06
Smc1aQ9CU62 Olfr380-201ENSMUST00000075532 936 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Smc1aQ9CU62 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Smc1aQ9CU62 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Smc1aQ9CU62 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Smc1aQ9CU62 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Smc1aQ9CU62 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Smc1aQ9CU62 Tcp10a-201ENSMUST00000095726 2442 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Smc1aQ9CU62 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Smc1aQ9CU62 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Smc1aQ9CU62 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC8.41□□□□□ -1.06
Smc1aQ9CU62 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Smc1aQ9CU62 Zfyve9-201ENSMUST00000042185 2170 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Smc1aQ9CU62 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
Smc1aQ9CU62 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Smc1aQ9CU62 Gm6356-201ENSMUST00000166618 1757 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Smc1aQ9CU62 Csnk1g1-204ENSMUST00000130798 1648 ntTSL 5 BASIC8.4□□□□□ -1.06
Smc1aQ9CU62 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Smc1aQ9CU62 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Smc1aQ9CU62 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Smc1aQ9CU62 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Smc1aQ9CU62 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Smc1aQ9CU62 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Smc1aQ9CU62 Tpo-201ENSMUST00000021005 3299 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Smc1aQ9CU62 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Smc1aQ9CU62 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Smc1aQ9CU62 Gm44101-201ENSMUST00000203951 2221 ntBASIC8.4□□□□□ -1.06
Smc1aQ9CU62 Masp2-201ENSMUST00000052060 3058 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Smc1aQ9CU62 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Smc1aQ9CU62 Gm15209-201ENSMUST00000117703 400 ntBASIC8.4□□□□□ -1.06
Smc1aQ9CU62 Gm13915-201ENSMUST00000119314 931 ntBASIC8.4□□□□□ -1.06
Smc1aQ9CU62 Gm12959-201ENSMUST00000119396 403 ntBASIC8.4□□□□□ -1.06
Smc1aQ9CU62 Gm13466-201ENSMUST00000121515 999 ntBASIC8.4□□□□□ -1.06
Smc1aQ9CU62 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC8.4□□□□□ -1.06
Smc1aQ9CU62 1810062O18Rik-204ENSMUST00000141265 751 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Smc1aQ9CU62 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC8.4□□□□□ -1.06
Smc1aQ9CU62 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC8.4□□□□□ -1.06
Smc1aQ9CU62 Gm28195-201ENSMUST00000186992 372 ntBASIC8.4□□□□□ -1.06
Smc1aQ9CU62 Gm28864-201ENSMUST00000189251 644 ntBASIC8.4□□□□□ -1.06
Smc1aQ9CU62 Gm29496-201ENSMUST00000189854 693 ntBASIC8.4□□□□□ -1.06
Smc1aQ9CU62 Gm38337-201ENSMUST00000193986 599 ntBASIC8.4□□□□□ -1.06
Smc1aQ9CU62 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC8.4□□□□□ -1.06
Smc1aQ9CU62 Gm43812-202ENSMUST00000202701 581 ntBASIC8.4□□□□□ -1.06
Smc1aQ9CU62 Gm19092-201ENSMUST00000209036 969 ntBASIC8.4□□□□□ -1.06
Smc1aQ9CU62 Olfr674-ps1-201ENSMUST00000209383 946 ntBASIC8.4□□□□□ -1.06
Smc1aQ9CU62 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC8.4□□□□□ -1.06
Smc1aQ9CU62 AC122533.2-201ENSMUST00000223772 545 ntBASIC8.4□□□□□ -1.06
Smc1aQ9CU62 AC165287.1-201ENSMUST00000224985 178 ntBASIC8.4□□□□□ -1.06
Smc1aQ9CU62 Vmn1r41-204ENSMUST00000227039 985 ntBASIC8.4□□□□□ -1.06
Smc1aQ9CU62 Olfr672-201ENSMUST00000050599 939 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Smc1aQ9CU62 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Smc1aQ9CU62 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC8.4□□□□□ -1.06
Smc1aQ9CU62 Olfr676-201ENSMUST00000098162 954 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Smc1aQ9CU62 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC8.4□□□□□ -1.06
Smc1aQ9CU62 Olfr510-202ENSMUST00000213979 2898 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Smc1aQ9CU62 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Smc1aQ9CU62 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Smc1aQ9CU62 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Smc1aQ9CU62 AC174797.5-201ENSMUST00000225055 1860 ntBASIC8.4□□□□□ -1.07
Smc1aQ9CU62 Gm38251-201ENSMUST00000192968 2575 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Smc1aQ9CU62 Gm6823-201ENSMUST00000120791 1839 ntBASIC8.4□□□□□ -1.07
Smc1aQ9CU62 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Smc1aQ9CU62 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Smc1aQ9CU62 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Smc1aQ9CU62 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Smc1aQ9CU62 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms