Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Ncor1-205ENSMUST00000101067 7243 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Scrt1Q99M85 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Scrt1Q99M85 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Scrt1Q99M85 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Scrt1Q99M85 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Scrt1Q99M85 Gm14373-201ENSMUST00000122467 2158 ntBASIC6.64□□□□□ -1.35
Scrt1Q99M85 Vmn1r26-202ENSMUST00000228040 4546 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Scrt1Q99M85 Ankrd6-203ENSMUST00000084749 4573 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
Scrt1Q99M85 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Scrt1Q99M85 Cep170-215ENSMUST00000195717 6967 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
Scrt1Q99M85 Vmn2r-ps99-202ENSMUST00000223517 2338 ntBASIC6.64□□□□□ -1.35
Scrt1Q99M85 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Scrt1Q99M85 Gm43398-201ENSMUST00000196584 2742 ntBASIC6.63□□□□□ -1.35
Scrt1Q99M85 Eif4a2-202ENSMUST00000077605 2708 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Scrt1Q99M85 Cs-201ENSMUST00000005826 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Scrt1Q99M85 Gtf3c2-210ENSMUST00000202639 4200 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Scrt1Q99M85 Prkaa1-202ENSMUST00000228218 4618 ntBASIC6.63□□□□□ -1.35
Scrt1Q99M85 Gm25631-201ENSMUST00000104390 130 ntBASIC6.63□□□□□ -1.35
Scrt1Q99M85 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
Scrt1Q99M85 Pm20d1-202ENSMUST00000112393 6900 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Scrt1Q99M85 Gm8916-201ENSMUST00000119732 949 ntBASIC6.63□□□□□ -1.35
Scrt1Q99M85 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Scrt1Q99M85 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC6.63□□□□□ -1.35
Scrt1Q99M85 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC6.63□□□□□ -1.35
Scrt1Q99M85 3110099E03Rik-203ENSMUST00000143695 1353 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Scrt1Q99M85 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC6.63□□□□□ -1.35
Scrt1Q99M85 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
Scrt1Q99M85 Gm6838-201ENSMUST00000172851 582 ntBASIC6.63□□□□□ -1.35
Scrt1Q99M85 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Scrt1Q99M85 Phc3-210ENSMUST00000177992 2920 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Scrt1Q99M85 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Scrt1Q99M85 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Scrt1Q99M85 Gm29383-201ENSMUST00000188284 480 ntBASIC6.63□□□□□ -1.35
Scrt1Q99M85 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC6.63□□□□□ -1.35
Scrt1Q99M85 Gm4856-201ENSMUST00000192696 1091 ntBASIC6.63□□□□□ -1.35
Scrt1Q99M85 Gm37336-201ENSMUST00000192794 760 ntTSL 2 BASIC6.63□□□□□ -1.35
Scrt1Q99M85 Selenok-ps7-201ENSMUST00000197069 283 ntBASIC6.63□□□□□ -1.35
Scrt1Q99M85 Igkv4-77-201ENSMUST00000199410 352 ntBASIC6.63□□□□□ -1.35
Scrt1Q99M85 Gm44249-201ENSMUST00000204538 1805 ntBASIC6.63□□□□□ -1.35
Scrt1Q99M85 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC6.63□□□□□ -1.35
Scrt1Q99M85 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Scrt1Q99M85 AC131654.1-201ENSMUST00000219675 745 ntBASIC6.63□□□□□ -1.35
Scrt1Q99M85 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC6.63□□□□□ -1.35
Scrt1Q99M85 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Scrt1Q99M85 Gm46323-201ENSMUST00000223136 628 ntTSL 5 BASIC6.63□□□□□ -1.35
Scrt1Q99M85 Dennd6a-203ENSMUST00000224111 2692 ntBASIC6.63□□□□□ -1.35
Scrt1Q99M85 AC154618.2-201ENSMUST00000228299 452 ntBASIC6.63□□□□□ -1.35
Scrt1Q99M85 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Scrt1Q99M85 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Scrt1Q99M85 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC6.63□□□□□ -1.35
Scrt1Q99M85 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC6.63□□□□□ -1.35
Scrt1Q99M85 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Scrt1Q99M85 Mov10l1-201ENSMUST00000015509 4052 ntAPPRIS P2 TSL 5 BASIC6.63□□□□□ -1.35
Scrt1Q99M85 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC6.63□□□□□ -1.35
Scrt1Q99M85 Cwc22-204ENSMUST00000111821 3388 ntAPPRIS P3 TSL 5 BASIC6.63□□□□□ -1.35
Scrt1Q99M85 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Scrt1Q99M85 Adam3-201ENSMUST00000033958 2743 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Scrt1Q99M85 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Scrt1Q99M85 Erp44-201ENSMUST00000030028 2624 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Scrt1Q99M85 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Scrt1Q99M85 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Scrt1Q99M85 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Scrt1Q99M85 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Scrt1Q99M85 Spag11b-202ENSMUST00000110767 1740 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Scrt1Q99M85 Krba1-204ENSMUST00000114572 4323 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Scrt1Q99M85 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Scrt1Q99M85 Gm36694-201ENSMUST00000205855 2719 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Scrt1Q99M85 Olfr225-202ENSMUST00000213169 2658 ntAPPRIS P5 TSL 5 BASIC6.62□□□□□ -1.35
Scrt1Q99M85 Gm45793-201ENSMUST00000207900 1342 ntBASIC6.62□□□□□ -1.35
Scrt1Q99M85 Gm40778-201ENSMUST00000217825 1344 ntBASIC6.62□□□□□ -1.35
Scrt1Q99M85 Gm25757-201ENSMUST00000103986 123 ntBASIC6.62□□□□□ -1.35
Scrt1Q99M85 Gm24195-201ENSMUST00000116804 137 ntBASIC6.62□□□□□ -1.35
Scrt1Q99M85 Gm14279-201ENSMUST00000117142 332 ntBASIC6.62□□□□□ -1.35
Scrt1Q99M85 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC6.62□□□□□ -1.35
Scrt1Q99M85 Gm10243-201ENSMUST00000117571 333 ntBASIC6.62□□□□□ -1.35
Scrt1Q99M85 Gm12851-201ENSMUST00000117920 421 ntBASIC6.62□□□□□ -1.35
Scrt1Q99M85 Gm11810-201ENSMUST00000118311 333 ntBASIC6.62□□□□□ -1.35
Scrt1Q99M85 Gm4773-201ENSMUST00000120392 702 ntBASIC6.62□□□□□ -1.35
Scrt1Q99M85 Gm12870-201ENSMUST00000121383 1016 ntBASIC6.62□□□□□ -1.35
Scrt1Q99M85 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC6.62□□□□□ -1.35
Scrt1Q99M85 Gm23888-201ENSMUST00000122690 253 ntBASIC6.62□□□□□ -1.35
Scrt1Q99M85 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
Scrt1Q99M85 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC6.62□□□□□ -1.35
Scrt1Q99M85 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC6.62□□□□□ -1.35
Scrt1Q99M85 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Scrt1Q99M85 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC6.62□□□□□ -1.35
Scrt1Q99M85 Gm5835-201ENSMUST00000185806 1270 ntBASIC6.62□□□□□ -1.35
Scrt1Q99M85 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC6.62□□□□□ -1.35
Scrt1Q99M85 Gm27680-202ENSMUST00000199221 807 ntBASIC6.62□□□□□ -1.35
Scrt1Q99M85 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Scrt1Q99M85 Gm8168-201ENSMUST00000209631 948 ntBASIC6.62□□□□□ -1.35
Scrt1Q99M85 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC6.62□□□□□ -1.35
Scrt1Q99M85 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC6.62□□□□□ -1.35
Scrt1Q99M85 Gpx4-ps2-202ENSMUST00000217344 782 ntBASIC6.62□□□□□ -1.35
Scrt1Q99M85 AC163667.2-201ENSMUST00000223769 791 ntBASIC6.62□□□□□ -1.35
Scrt1Q99M85 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Scrt1Q99M85 AC157212.1-201ENSMUST00000228398 1075 ntBASIC6.62□□□□□ -1.35
Scrt1Q99M85 n-R5s41-201ENSMUST00000083025 119 ntBASIC6.62□□□□□ -1.35
Scrt1Q99M85 Gm10247-201ENSMUST00000090395 333 ntBASIC6.62□□□□□ -1.35
Scrt1Q99M85 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms