Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Gm43012-201ENSMUST00000198569 937 ntBASIC8.55□□□□□ -1.04
Clp1Q99LI9 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC8.55□□□□□ -1.04
Clp1Q99LI9 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC8.55□□□□□ -1.04
Clp1Q99LI9 Gm44147-201ENSMUST00000204658 94 ntBASIC8.55□□□□□ -1.04
Clp1Q99LI9 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Gm45282-201ENSMUST00000209439 681 ntTSL 3 BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Olfr503-202ENSMUST00000211693 966 ntAPPRIS ALT1 BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Clp1Q99LI9 AC147245.1-201ENSMUST00000223294 677 ntBASIC8.55□□□□□ -1.04
Clp1Q99LI9 CT010505.1-201ENSMUST00000227026 396 ntBASIC8.55□□□□□ -1.04
Clp1Q99LI9 AC107452.2-201ENSMUST00000228415 363 ntBASIC8.55□□□□□ -1.04
Clp1Q99LI9 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Olfr503-201ENSMUST00000078162 972 ntAPPRIS P2 BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Zfp85os-201ENSMUST00000049518 2624 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Clp1Q99LI9 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC8.55□□□□□ -1.04
Clp1Q99LI9 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Gm8049-201ENSMUST00000214336 1782 ntBASIC8.55□□□□□ -1.04
Clp1Q99LI9 Rbmx-201ENSMUST00000098470 3107 ntTSL 5 BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Lyn-202ENSMUST00000103010 3387 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Clp1Q99LI9 Cpvl-203ENSMUST00000204674 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Onecut2-201ENSMUST00000115145 13389 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Onecut2-202ENSMUST00000175965 13391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Srp54b-201ENSMUST00000164243 2317 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Rnf141-204ENSMUST00000175981 2333 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Slc38a1-203ENSMUST00000100262 7752 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Smpd4-209ENSMUST00000165363 3046 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Sp1-202ENSMUST00000163709 3134 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Vmn2r30-201ENSMUST00000072475 3616 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Gm15731-201ENSMUST00000146887 2195 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Greb1-203ENSMUST00000159120 6346 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Olfr1512-202ENSMUST00000214980 2082 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Gm15925-201ENSMUST00000120641 1881 ntBASIC8.54□□□□□ -1.04
Clp1Q99LI9 Gm28906-201ENSMUST00000191371 1779 ntBASIC8.54□□□□□ -1.04
Clp1Q99LI9 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Ermard-204ENSMUST00000097395 1593 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Akap2-202ENSMUST00000098064 7172 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Pkp4-203ENSMUST00000112577 4222 ntTSL 5 BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Akap2-204ENSMUST00000102902 6993 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Gm14463-201ENSMUST00000121117 498 ntBASIC8.54□□□□□ -1.04
Clp1Q99LI9 Gm22025-201ENSMUST00000122734 302 ntBASIC8.54□□□□□ -1.04
Clp1Q99LI9 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Gm15124-201ENSMUST00000142053 953 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Cd48-201ENSMUST00000015499 922 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Gm24551-201ENSMUST00000158645 92 ntBASIC8.54□□□□□ -1.04
Clp1Q99LI9 Vis1-201ENSMUST00000183957 201 ntBASIC8.54□□□□□ -1.04
Clp1Q99LI9 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Gm7560-201ENSMUST00000187748 873 ntBASIC8.54□□□□□ -1.04
Clp1Q99LI9 Gm8498-201ENSMUST00000188227 974 ntBASIC8.54□□□□□ -1.04
Clp1Q99LI9 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Clp1Q99LI9 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Gm38087-201ENSMUST00000193653 265 ntTSL 5 BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Gm7115-201ENSMUST00000193706 832 ntBASIC8.54□□□□□ -1.04
Clp1Q99LI9 Ighv1-21-201ENSMUST00000194856 351 ntBASIC8.54□□□□□ -1.04
Clp1Q99LI9 Gm36932-201ENSMUST00000195226 929 ntBASIC8.54□□□□□ -1.04
Clp1Q99LI9 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Gm43203-201ENSMUST00000200130 558 ntBASIC8.54□□□□□ -1.04
Clp1Q99LI9 Gm19254-201ENSMUST00000204828 294 ntBASIC8.54□□□□□ -1.04
Clp1Q99LI9 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC8.54□□□□□ -1.04
Clp1Q99LI9 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC8.54□□□□□ -1.04
Clp1Q99LI9 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC8.54□□□□□ -1.04
Clp1Q99LI9 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Clp1Q99LI9 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Gm22362-201ENSMUST00000083102 134 ntBASIC8.54□□□□□ -1.04
Clp1Q99LI9 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Wfikkn2-201ENSMUST00000061469 3516 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Clp1Q99LI9 A730065G17Rik-201ENSMUST00000217082 3335 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Trak2-205ENSMUST00000174120 2636 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Gm43515-201ENSMUST00000197930 2141 ntBASIC8.54□□□□□ -1.04
Clp1Q99LI9 Vmn1r26-203ENSMUST00000228070 4419 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Rab23-202ENSMUST00000115174 4218 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Zwilch-201ENSMUST00000122091 2957 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Gm45201-201ENSMUST00000207187 2679 ntBASIC8.54□□□□□ -1.04
Clp1Q99LI9 Olfr1350-202ENSMUST00000207221 1521 ntAPPRIS P1 TSL 3 BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Zfp93-202ENSMUST00000108438 3508 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Adh6a-201ENSMUST00000013455 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Clp1Q99LI9 AC132465.1-201ENSMUST00000219938 1307 ntBASIC8.54□□□□□ -1.04
Clp1Q99LI9 9630001P10Rik-202ENSMUST00000181335 3006 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Elovl4-201ENSMUST00000034796 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Clp1Q99LI9 Zfp354a-203ENSMUST00000109119 2078 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Clp1Q99LI9 Zfp14-202ENSMUST00000207072 2835 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Clp1Q99LI9 Arhgef3-201ENSMUST00000049206 3585 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Clp1Q99LI9 Gm15127-202ENSMUST00000101190 1972 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Clp1Q99LI9 Ablim1-207ENSMUST00000111529 5927 ntTSL 5 BASIC8.53□□□□□ -1.04
Clp1Q99LI9 Cpa4-201ENSMUST00000049251 2739 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Clp1Q99LI9 Bbs9-201ENSMUST00000039798 3382 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms