Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC8.8□□□□□ -1
Nup88Q8CEC0 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC8.8□□□□□ -1
Nup88Q8CEC0 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC8.8□□□□□ -1
Nup88Q8CEC0 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC8.8□□□□□ -1
Nup88Q8CEC0 AC139323.1-201ENSMUST00000223370 1040 ntBASIC8.8□□□□□ -1
Nup88Q8CEC0 AC154649.2-201ENSMUST00000228189 808 ntBASIC8.8□□□□□ -1
Nup88Q8CEC0 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC8.8□□□□□ -1
Nup88Q8CEC0 Apobec4-201ENSMUST00000068875 1566 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Nup88Q8CEC0 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Nup88Q8CEC0 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Nup88Q8CEC0 Gm37364-201ENSMUST00000192533 3920 ntBASIC8.8□□□□□ -1
Nup88Q8CEC0 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC8.8□□□□□ -1
Nup88Q8CEC0 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Nup88Q8CEC0 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Nup88Q8CEC0 Trim40-201ENSMUST00000087158 2117 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Nup88Q8CEC0 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Nup88Q8CEC0 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC8.8□□□□□ -1
Nup88Q8CEC0 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Nup88Q8CEC0 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Nup88Q8CEC0 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC8.79□□□□□ -1
Nup88Q8CEC0 Gm20731-201ENSMUST00000193462 2288 ntBASIC8.79□□□□□ -1
Nup88Q8CEC0 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Nup88Q8CEC0 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Nup88Q8CEC0 Gm43158-201ENSMUST00000198484 1555 ntBASIC8.79□□□□□ -1
Nup88Q8CEC0 Scd3-201ENSMUST00000026220 3470 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Nup88Q8CEC0 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC8.79□□□□□ -1
Nup88Q8CEC0 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC8.79□□□□□ -1
Nup88Q8CEC0 Gm12844-201ENSMUST00000119463 582 ntBASIC8.79□□□□□ -1
Nup88Q8CEC0 Gm13680-201ENSMUST00000119790 793 ntBASIC8.79□□□□□ -1
Nup88Q8CEC0 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC8.79□□□□□ -1
Nup88Q8CEC0 Gm16330-201ENSMUST00000128324 297 ntBASIC8.79□□□□□ -1
Nup88Q8CEC0 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC8.79□□□□□ -1
Nup88Q8CEC0 Gm15124-201ENSMUST00000142053 953 ntTSL 1 (best) BASIC8.79□□□□□ -1
Nup88Q8CEC0 Gm9697-201ENSMUST00000147052 997 ntBASIC8.79□□□□□ -1
Nup88Q8CEC0 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Nup88Q8CEC0 Clec2i-205ENSMUST00000162666 1091 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Nup88Q8CEC0 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Nup88Q8CEC0 Gm21293-201ENSMUST00000170919 864 ntTSL 5 BASIC8.79□□□□□ -1
Nup88Q8CEC0 Gm6004-201ENSMUST00000173237 1116 ntBASIC8.79□□□□□ -1
Nup88Q8CEC0 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC8.79□□□□□ -1
Nup88Q8CEC0 Gm29496-201ENSMUST00000189854 693 ntBASIC8.79□□□□□ -1
Nup88Q8CEC0 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC8.79□□□□□ -1
Nup88Q8CEC0 Gm18428-201ENSMUST00000194986 791 ntBASIC8.79□□□□□ -1
Nup88Q8CEC0 Gm43515-201ENSMUST00000197930 2141 ntBASIC8.79□□□□□ -1
Nup88Q8CEC0 Gm8077-201ENSMUST00000209221 1024 ntBASIC8.79□□□□□ -1
Nup88Q8CEC0 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC8.79□□□□□ -1
Nup88Q8CEC0 AC099629.1-201ENSMUST00000226778 464 ntBASIC8.79□□□□□ -1
Nup88Q8CEC0 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Nup88Q8CEC0 Mir135b-201ENSMUST00000083501 97 ntBASIC8.79□□□□□ -1
Nup88Q8CEC0 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC8.79□□□□□ -1
Nup88Q8CEC0 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Nup88Q8CEC0 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Nup88Q8CEC0 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC8.79□□□□□ -1
Nup88Q8CEC0 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Nup88Q8CEC0 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC8.79□□□□□ -1
Nup88Q8CEC0 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Nup88Q8CEC0 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Nup88Q8CEC0 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Nup88Q8CEC0 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
Nup88Q8CEC0 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC8.78□□□□□ -1
Nup88Q8CEC0 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Nup88Q8CEC0 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Nup88Q8CEC0 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Nup88Q8CEC0 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Nup88Q8CEC0 4933416E14Rik-202ENSMUST00000137955 1938 ntBASIC8.78□□□□□ -1
Nup88Q8CEC0 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC8.78□□□□□ -1
Nup88Q8CEC0 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Nup88Q8CEC0 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Nup88Q8CEC0 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Nup88Q8CEC0 Gm25916-201ENSMUST00000104263 131 ntBASIC8.78□□□□□ -1
Nup88Q8CEC0 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC8.78□□□□□ -1
Nup88Q8CEC0 Gm14201-201ENSMUST00000117627 289 ntBASIC8.78□□□□□ -1
Nup88Q8CEC0 Gm14826-201ENSMUST00000121284 901 ntBASIC8.78□□□□□ -1
Nup88Q8CEC0 Gm12634-201ENSMUST00000122157 992 ntBASIC8.78□□□□□ -1
Nup88Q8CEC0 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC8.78□□□□□ -1
Nup88Q8CEC0 Gm24530-201ENSMUST00000157948 288 ntBASIC8.78□□□□□ -1
Nup88Q8CEC0 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC8.78□□□□□ -1
Nup88Q8CEC0 Gm21312-202ENSMUST00000180889 1246 ntAPPRIS ALT2 TSL 2 BASIC8.78□□□□□ -1
Nup88Q8CEC0 Gm21304-202ENSMUST00000181059 1246 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
Nup88Q8CEC0 Gm8764-202ENSMUST00000181179 1246 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
Nup88Q8CEC0 Gm6763-202ENSMUST00000181287 1246 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
Nup88Q8CEC0 Gm21293-203ENSMUST00000181634 1246 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
Nup88Q8CEC0 Gm20765-202ENSMUST00000181703 1246 ntAPPRIS ALT2 TSL 2 BASIC8.78□□□□□ -1
Nup88Q8CEC0 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC8.78□□□□□ -1
Nup88Q8CEC0 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC8.78□□□□□ -1
Nup88Q8CEC0 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC8.78□□□□□ -1
Nup88Q8CEC0 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC8.78□□□□□ -1
Nup88Q8CEC0 Krtdap-209ENSMUST00000190990 403 ntTSL 1 (best) BASIC8.78□□□□□ -1
Nup88Q8CEC0 Gm19035-202ENSMUST00000194575 959 ntBASIC8.78□□□□□ -1
Nup88Q8CEC0 Cnn3-203ENSMUST00000197135 1242 ntTSL 5 BASIC8.78□□□□□ -1
Nup88Q8CEC0 Ube2n-ps1-201ENSMUST00000201768 459 ntBASIC8.78□□□□□ -1
Nup88Q8CEC0 Gm31663-202ENSMUST00000208481 1190 ntBASIC8.78□□□□□ -1
Nup88Q8CEC0 Gm45319-201ENSMUST00000210220 318 ntBASIC8.78□□□□□ -1
Nup88Q8CEC0 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC8.78□□□□□ -1
Nup88Q8CEC0 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC8.78□□□□□ -1
Nup88Q8CEC0 Gm19056-201ENSMUST00000218220 797 ntBASIC8.78□□□□□ -1
Nup88Q8CEC0 Gm4796-201ENSMUST00000219802 624 ntBASIC8.78□□□□□ -1
Nup88Q8CEC0 Gm46323-201ENSMUST00000223136 628 ntTSL 5 BASIC8.78□□□□□ -1
Nup88Q8CEC0 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Nup88Q8CEC0 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms