Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Vps53Q8CCB4 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Vps53Q8CCB4 Gykl1-201ENSMUST00000066193 1990 ntAPPRIS P1 BASIC8.79□□□□□ -1
Vps53Q8CCB4 Gm45112-201ENSMUST00000208576 5125 ntBASIC8.79□□□□□ -1
Vps53Q8CCB4 Kbtbd3-202ENSMUST00000212221 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Vps53Q8CCB4 Gm11864-201ENSMUST00000116179 1220 ntBASIC8.79□□□□□ -1
Vps53Q8CCB4 Gm13463-201ENSMUST00000119020 233 ntBASIC8.79□□□□□ -1
Vps53Q8CCB4 Gm15153-201ENSMUST00000119867 274 ntBASIC8.79□□□□□ -1
Vps53Q8CCB4 Gm12642-201ENSMUST00000121098 876 ntBASIC8.79□□□□□ -1
Vps53Q8CCB4 4930439A04Rik-201ENSMUST00000137241 739 ntTSL 3 BASIC8.79□□□□□ -1
Vps53Q8CCB4 Gm9697-201ENSMUST00000147052 997 ntBASIC8.79□□□□□ -1
Vps53Q8CCB4 4930445N08Rik-201ENSMUST00000156925 313 ntTSL 1 (best) BASIC8.79□□□□□ -1
Vps53Q8CCB4 Mir1932-201ENSMUST00000157390 90 ntBASIC8.79□□□□□ -1
Vps53Q8CCB4 Gm9141-201ENSMUST00000159355 1007 ntBASIC8.79□□□□□ -1
Vps53Q8CCB4 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC8.79□□□□□ -1
Vps53Q8CCB4 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC8.79□□□□□ -1
Vps53Q8CCB4 Gm29918-202ENSMUST00000206036 258 ntTSL 5 BASIC8.79□□□□□ -1
Vps53Q8CCB4 Gm45359-201ENSMUST00000210635 427 ntBASIC8.79□□□□□ -1
Vps53Q8CCB4 Gm7943-201ENSMUST00000212078 1034 ntBASIC8.79□□□□□ -1
Vps53Q8CCB4 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC8.79□□□□□ -1
Vps53Q8CCB4 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC8.79□□□□□ -1
Vps53Q8CCB4 AC163651.1-201ENSMUST00000222500 372 ntBASIC8.79□□□□□ -1
Vps53Q8CCB4 Kcne3-201ENSMUST00000049333 1012 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Vps53Q8CCB4 Acad11-201ENSMUST00000047799 3444 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Vps53Q8CCB4 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -1
Vps53Q8CCB4 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC8.79□□□□□ -1
Vps53Q8CCB4 Ptk2b-208ENSMUST00000178730 3863 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Vps53Q8CCB4 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Vps53Q8CCB4 Slc7a2-204ENSMUST00000118432 3681 ntTSL 1 (best) BASIC8.79□□□□□ -1
Vps53Q8CCB4 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Vps53Q8CCB4 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Vps53Q8CCB4 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Vps53Q8CCB4 AC166341.5-201ENSMUST00000222206 1400 ntBASIC8.79□□□□□ -1
Vps53Q8CCB4 Gm17841-201ENSMUST00000210711 2425 ntBASIC8.79□□□□□ -1
Vps53Q8CCB4 Gm38300-201ENSMUST00000194245 1870 ntBASIC8.79□□□□□ -1
Vps53Q8CCB4 Gm42636-201ENSMUST00000197174 2239 ntBASIC8.78□□□□□ -1
Vps53Q8CCB4 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC8.78□□□□□ -1
Vps53Q8CCB4 Eif4e2-202ENSMUST00000076362 3394 ntTSL 1 (best) BASIC8.78□□□□□ -1
Vps53Q8CCB4 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Vps53Q8CCB4 Gm36694-201ENSMUST00000205855 2719 ntTSL 1 (best) BASIC8.78□□□□□ -1
Vps53Q8CCB4 Prr15l-204ENSMUST00000107636 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Vps53Q8CCB4 Mapk10-202ENSMUST00000112846 2617 ntTSL 1 (best) BASIC8.78□□□□□ -1
Vps53Q8CCB4 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Vps53Q8CCB4 Gm22022-201ENSMUST00000104355 127 ntBASIC8.78□□□□□ -1
Vps53Q8CCB4 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC8.78□□□□□ -1
Vps53Q8CCB4 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC8.78□□□□□ -1
Vps53Q8CCB4 Gm13255-201ENSMUST00000117255 547 ntBASIC8.78□□□□□ -1
Vps53Q8CCB4 Gm4918-201ENSMUST00000119420 1084 ntBASIC8.78□□□□□ -1
Vps53Q8CCB4 Gm13038-201ENSMUST00000119886 459 ntBASIC8.78□□□□□ -1
Vps53Q8CCB4 Gm12993-201ENSMUST00000119900 479 ntBASIC8.78□□□□□ -1
Vps53Q8CCB4 Gm12967-201ENSMUST00000122147 289 ntBASIC8.78□□□□□ -1
Vps53Q8CCB4 Tsc22d1-205ENSMUST00000133224 786 ntTSL 2 BASIC8.78□□□□□ -1
Vps53Q8CCB4 AW495222-202ENSMUST00000149839 868 ntTSL 1 (best) BASIC8.78□□□□□ -1
Vps53Q8CCB4 Gm17205-201ENSMUST00000168370 1207 ntBASIC8.78□□□□□ -1
Vps53Q8CCB4 A530083I20Rik-202ENSMUST00000180877 1022 ntTSL 1 (best) BASIC8.78□□□□□ -1
Vps53Q8CCB4 Mir8099-2-201ENSMUST00000183568 127 ntBASIC8.78□□□□□ -1
Vps53Q8CCB4 Mir8099-1-201ENSMUST00000184238 127 ntBASIC8.78□□□□□ -1
Vps53Q8CCB4 Gm5147-201ENSMUST00000185999 794 ntBASIC8.78□□□□□ -1
Vps53Q8CCB4 Gm29230-201ENSMUST00000189687 412 ntTSL 1 (best) BASIC8.78□□□□□ -1
Vps53Q8CCB4 Gm5541-201ENSMUST00000193248 1113 ntBASIC8.78□□□□□ -1
Vps53Q8CCB4 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC8.78□□□□□ -1
Vps53Q8CCB4 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC8.78□□□□□ -1
Vps53Q8CCB4 4930584F24Rik-204ENSMUST00000198070 1163 ntTSL 1 (best) BASIC8.78□□□□□ -1
Vps53Q8CCB4 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC8.78□□□□□ -1
Vps53Q8CCB4 Gm40304-201ENSMUST00000202154 268 ntTSL 3 BASIC8.78□□□□□ -1
Vps53Q8CCB4 Gm4605-201ENSMUST00000203148 625 ntBASIC8.78□□□□□ -1
Vps53Q8CCB4 Gm44245-201ENSMUST00000204304 232 ntBASIC8.78□□□□□ -1
Vps53Q8CCB4 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC8.78□□□□□ -1
Vps53Q8CCB4 Gm18363-201ENSMUST00000221671 730 ntBASIC8.78□□□□□ -1
Vps53Q8CCB4 AC133598.2-201ENSMUST00000224302 624 ntBASIC8.78□□□□□ -1
Vps53Q8CCB4 AC159205.7-201ENSMUST00000225988 692 ntBASIC8.78□□□□□ -1
Vps53Q8CCB4 AC129537.1-202ENSMUST00000226619 430 ntBASIC8.78□□□□□ -1
Vps53Q8CCB4 AC165154.2-201ENSMUST00000227310 336 ntBASIC8.78□□□□□ -1
Vps53Q8CCB4 AC154757.2-201ENSMUST00000228885 743 ntBASIC8.78□□□□□ -1
Vps53Q8CCB4 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC8.78□□□□□ -1
Vps53Q8CCB4 Prh1-201ENSMUST00000074042 819 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Vps53Q8CCB4 Plau-201ENSMUST00000022368 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Vps53Q8CCB4 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Vps53Q8CCB4 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC8.78□□□□□ -1
Vps53Q8CCB4 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Vps53Q8CCB4 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
Vps53Q8CCB4 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC8.78□□□□□ -1
Vps53Q8CCB4 Gm21043-201ENSMUST00000199316 1517 ntBASIC8.78□□□□□ -1
Vps53Q8CCB4 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC8.78□□□□□ -1
Vps53Q8CCB4 Extl2-203ENSMUST00000106502 2840 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Vps53Q8CCB4 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Vps53Q8CCB4 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Vps53Q8CCB4 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Vps53Q8CCB4 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Vps53Q8CCB4 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Vps53Q8CCB4 Gm37980-201ENSMUST00000194420 1910 ntBASIC8.78□□□□□ -1
Vps53Q8CCB4 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Vps53Q8CCB4 Gm37706-201ENSMUST00000195379 2765 ntBASIC8.78□□□□□ -1
Vps53Q8CCB4 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC8.78□□□□□ -1
Vps53Q8CCB4 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC8.77□□□□□ -1
Vps53Q8CCB4 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Vps53Q8CCB4 Fbxw7-202ENSMUST00000107675 3599 ntAPPRIS ALT1 TSL 5 BASIC8.77□□□□□ -1
Vps53Q8CCB4 4930562C15Rik-201ENSMUST00000100211 3829 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1
Vps53Q8CCB4 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Vps53Q8CCB4 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms