Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Col16a1Q8BLX7 9030624J02Rik-201ENSMUST00000033280 2934 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Col16a1Q8BLX7 Zfp551-201ENSMUST00000080348 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Col16a1Q8BLX7 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Col16a1Q8BLX7 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Col16a1Q8BLX7 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Col16a1Q8BLX7 Trip12-207ENSMUST00000186648 6442 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Col16a1Q8BLX7 Kirrel3-206ENSMUST00000187625 4108 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Col16a1Q8BLX7 Gm22426-201ENSMUST00000103811 96 ntBASIC9.67□□□□□ -0.86
Col16a1Q8BLX7 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Col16a1Q8BLX7 Gm14869-201ENSMUST00000119007 884 ntBASIC9.67□□□□□ -0.86
Col16a1Q8BLX7 Gm11343-201ENSMUST00000120579 599 ntBASIC9.67□□□□□ -0.86
Col16a1Q8BLX7 Gm11434-201ENSMUST00000122379 629 ntBASIC9.67□□□□□ -0.86
Col16a1Q8BLX7 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC9.67□□□□□ -0.86
Col16a1Q8BLX7 Gm16110-201ENSMUST00000161473 892 ntTSL 3 BASIC9.67□□□□□ -0.86
Col16a1Q8BLX7 Gm17212-201ENSMUST00000166666 259 ntBASIC9.67□□□□□ -0.86
Col16a1Q8BLX7 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Col16a1Q8BLX7 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC9.67□□□□□ -0.86
Col16a1Q8BLX7 Gm19087-201ENSMUST00000191430 946 ntBASIC9.67□□□□□ -0.86
Col16a1Q8BLX7 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC9.67□□□□□ -0.86
Col16a1Q8BLX7 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC9.67□□□□□ -0.86
Col16a1Q8BLX7 Gm42752-201ENSMUST00000198394 1106 ntBASIC9.67□□□□□ -0.86
Col16a1Q8BLX7 AC155941.3-201ENSMUST00000218476 308 ntBASIC9.67□□□□□ -0.86
Col16a1Q8BLX7 Gm20302-201ENSMUST00000080671 275 ntBASIC9.67□□□□□ -0.86
Col16a1Q8BLX7 Tnik-201ENSMUST00000159236 12276 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Col16a1Q8BLX7 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Col16a1Q8BLX7 Diaph1-203ENSMUST00000115629 5416 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Col16a1Q8BLX7 Gm19325-201ENSMUST00000186238 3382 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Col16a1Q8BLX7 Alg8-201ENSMUST00000098300 2039 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Col16a1Q8BLX7 Zfp532-208ENSMUST00000182852 5476 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Col16a1Q8BLX7 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Col16a1Q8BLX7 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
Col16a1Q8BLX7 Hcfc1-202ENSMUST00000114372 8262 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Col16a1Q8BLX7 Ncald-203ENSMUST00000119730 3295 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Col16a1Q8BLX7 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Col16a1Q8BLX7 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Col16a1Q8BLX7 Gm28758-201ENSMUST00000186123 2167 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Col16a1Q8BLX7 Grik1-202ENSMUST00000072256 3655 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Col16a1Q8BLX7 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Col16a1Q8BLX7 Prkrip1-204ENSMUST00000151786 3893 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Col16a1Q8BLX7 Garnl3-202ENSMUST00000102810 3578 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Col16a1Q8BLX7 Gm22284-201ENSMUST00000104132 132 ntBASIC9.66□□□□□ -0.86
Col16a1Q8BLX7 Gm12140-201ENSMUST00000121214 544 ntBASIC9.66□□□□□ -0.86
Col16a1Q8BLX7 Gm4886-201ENSMUST00000121874 1176 ntBASIC9.66□□□□□ -0.86
Col16a1Q8BLX7 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Col16a1Q8BLX7 Gm5871-201ENSMUST00000176461 718 ntBASIC9.66□□□□□ -0.86
Col16a1Q8BLX7 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Col16a1Q8BLX7 Gm10410-201ENSMUST00000180138 384 ntBASIC9.66□□□□□ -0.86
Col16a1Q8BLX7 Gm26898-201ENSMUST00000181678 384 ntBASIC9.66□□□□□ -0.86
Col16a1Q8BLX7 Gm27602-201ENSMUST00000183861 111 ntBASIC9.66□□□□□ -0.86
Col16a1Q8BLX7 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC9.66□□□□□ -0.86
Col16a1Q8BLX7 Gm28377-201ENSMUST00000189695 720 ntBASIC9.66□□□□□ -0.86
Col16a1Q8BLX7 Gm412-201ENSMUST00000193360 948 ntBASIC9.66□□□□□ -0.86
Col16a1Q8BLX7 AC122844.1-201ENSMUST00000195971 107 ntBASIC9.66□□□□□ -0.86
Col16a1Q8BLX7 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC9.66□□□□□ -0.86
Col16a1Q8BLX7 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC9.66□□□□□ -0.86
Col16a1Q8BLX7 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Col16a1Q8BLX7 AC122533.1-201ENSMUST00000225177 767 ntBASIC9.66□□□□□ -0.86
Col16a1Q8BLX7 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Col16a1Q8BLX7 Ces1g-201ENSMUST00000044602 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Col16a1Q8BLX7 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Col16a1Q8BLX7 Kalrn-204ENSMUST00000114949 3618 ntTSL 5 BASIC9.66□□□□□ -0.86
Col16a1Q8BLX7 Slc5a9-203ENSMUST00000102721 4484 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Col16a1Q8BLX7 Gm28892-201ENSMUST00000188123 2721 ntTSL 5 BASIC9.65□□□□□ -0.86
Col16a1Q8BLX7 Plb1-206ENSMUST00000202220 4771 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Col16a1Q8BLX7 Gm43411-201ENSMUST00000196235 1579 ntBASIC9.65□□□□□ -0.86
Col16a1Q8BLX7 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Col16a1Q8BLX7 Lrrc32-201ENSMUST00000165205 3817 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Col16a1Q8BLX7 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Col16a1Q8BLX7 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Col16a1Q8BLX7 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Col16a1Q8BLX7 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Col16a1Q8BLX7 Lyve1-201ENSMUST00000033050 2893 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Col16a1Q8BLX7 Gm13940-201ENSMUST00000121023 301 ntBASIC9.65□□□□□ -0.86
Col16a1Q8BLX7 Gm12369-201ENSMUST00000121343 942 ntBASIC9.65□□□□□ -0.86
Col16a1Q8BLX7 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC9.65□□□□□ -0.86
Col16a1Q8BLX7 Mir1929-201ENSMUST00000158635 93 ntBASIC9.65□□□□□ -0.86
Col16a1Q8BLX7 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Col16a1Q8BLX7 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC9.65□□□□□ -0.86
Col16a1Q8BLX7 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC9.65□□□□□ -0.86
Col16a1Q8BLX7 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC9.65□□□□□ -0.86
Col16a1Q8BLX7 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC9.65□□□□□ -0.86
Col16a1Q8BLX7 AC187103.4-201ENSMUST00000225399 300 ntBASIC9.65□□□□□ -0.86
Col16a1Q8BLX7 AC135086.1-201ENSMUST00000228621 817 ntBASIC9.65□□□□□ -0.86
Col16a1Q8BLX7 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Col16a1Q8BLX7 Zfp865-202ENSMUST00000076791 1129 ntBASIC9.65□□□□□ -0.86
Col16a1Q8BLX7 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Col16a1Q8BLX7 Zfp68-202ENSMUST00000085852 3318 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Col16a1Q8BLX7 Gm2694-201ENSMUST00000180700 2314 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Col16a1Q8BLX7 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Col16a1Q8BLX7 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Col16a1Q8BLX7 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Col16a1Q8BLX7 Apobec1-203ENSMUST00000112587 2072 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Col16a1Q8BLX7 Arsj-201ENSMUST00000093976 3859 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Col16a1Q8BLX7 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Col16a1Q8BLX7 Gm7134-201ENSMUST00000122296 2406 ntBASIC9.64□□□□□ -0.87
Col16a1Q8BLX7 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Col16a1Q8BLX7 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Col16a1Q8BLX7 Atg7-202ENSMUST00000169310 3895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Col16a1Q8BLX7 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms