Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC7.23□□□□□ -1.25
ClpbQ60649 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ClpbQ60649 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC7.23□□□□□ -1.25
ClpbQ60649 Gm6767-201ENSMUST00000118650 1381 ntBASIC7.23□□□□□ -1.25
ClpbQ60649 Erp44-201ENSMUST00000030028 2624 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
ClpbQ60649 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
ClpbQ60649 Gm43123-201ENSMUST00000201893 3471 ntBASIC7.23□□□□□ -1.25
ClpbQ60649 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
ClpbQ60649 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ClpbQ60649 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ClpbQ60649 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
ClpbQ60649 Gm42514-201ENSMUST00000196636 1832 ntBASIC7.23□□□□□ -1.25
ClpbQ60649 Gm23484-201ENSMUST00000104178 131 ntBASIC7.23□□□□□ -1.25
ClpbQ60649 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC7.23□□□□□ -1.25
ClpbQ60649 Amelx-203ENSMUST00000112119 841 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
ClpbQ60649 Fate1-202ENSMUST00000114569 1053 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
ClpbQ60649 Gm24195-201ENSMUST00000116804 137 ntBASIC7.23□□□□□ -1.25
ClpbQ60649 Gm11558-201ENSMUST00000118454 459 ntBASIC7.23□□□□□ -1.25
ClpbQ60649 Gm13495-201ENSMUST00000121156 537 ntBASIC7.23□□□□□ -1.25
ClpbQ60649 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ClpbQ60649 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ClpbQ60649 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ClpbQ60649 Gm9141-201ENSMUST00000159355 1007 ntBASIC7.23□□□□□ -1.25
ClpbQ60649 Gm4781-201ENSMUST00000167995 781 ntBASIC7.23□□□□□ -1.25
ClpbQ60649 Gm17046-201ENSMUST00000168078 850 ntBASIC7.23□□□□□ -1.25
ClpbQ60649 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ClpbQ60649 Gm29999-202ENSMUST00000193554 671 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ClpbQ60649 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC7.23□□□□□ -1.25
ClpbQ60649 Gm43108-201ENSMUST00000200525 293 ntBASIC7.23□□□□□ -1.25
ClpbQ60649 Gm44380-201ENSMUST00000203125 293 ntBASIC7.23□□□□□ -1.25
ClpbQ60649 Cd69-203ENSMUST00000204411 560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
ClpbQ60649 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC7.23□□□□□ -1.25
ClpbQ60649 0610006L08Rik-202ENSMUST00000206672 803 ntTSL 3 BASIC7.23□□□□□ -1.25
ClpbQ60649 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC7.23□□□□□ -1.25
ClpbQ60649 Gm38430-201ENSMUST00000209888 1240 ntBASIC7.23□□□□□ -1.25
ClpbQ60649 Gm5535-206ENSMUST00000210067 679 ntTSL 5 BASIC7.23□□□□□ -1.25
ClpbQ60649 Gm6885-201ENSMUST00000217261 372 ntBASIC7.23□□□□□ -1.25
ClpbQ60649 Gm18972-201ENSMUST00000218873 630 ntBASIC7.23□□□□□ -1.25
ClpbQ60649 B230303A05Rik-202ENSMUST00000220728 478 ntBASIC7.23□□□□□ -1.25
ClpbQ60649 AC163038.4-201ENSMUST00000224942 474 ntBASIC7.23□□□□□ -1.25
ClpbQ60649 AC126939.4-201ENSMUST00000225360 743 ntBASIC7.23□□□□□ -1.25
ClpbQ60649 AC161537.1-202ENSMUST00000228450 868 ntBASIC7.23□□□□□ -1.25
ClpbQ60649 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
ClpbQ60649 Rpl27a-ps1-201ENSMUST00000075382 448 ntBASIC7.23□□□□□ -1.25
ClpbQ60649 Gm25926-201ENSMUST00000082899 160 ntBASIC7.23□□□□□ -1.25
ClpbQ60649 Mir135b-201ENSMUST00000083501 97 ntBASIC7.23□□□□□ -1.25
ClpbQ60649 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
ClpbQ60649 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
ClpbQ60649 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ClpbQ60649 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
ClpbQ60649 Zfp964-201ENSMUST00000169125 1416 ntTSL 3 BASIC7.23□□□□□ -1.25
ClpbQ60649 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ClpbQ60649 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
ClpbQ60649 Dph5-201ENSMUST00000043342 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
ClpbQ60649 Ermard-204ENSMUST00000097395 1593 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
ClpbQ60649 Tnfaip6-201ENSMUST00000065927 1710 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
ClpbQ60649 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
ClpbQ60649 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
ClpbQ60649 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
ClpbQ60649 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
ClpbQ60649 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
ClpbQ60649 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ClpbQ60649 Ociad1-203ENSMUST00000166823 3354 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ClpbQ60649 C130083A15Rik-201ENSMUST00000205707 1460 ntBASIC7.23□□□□□ -1.25
ClpbQ60649 AC156645.1-201ENSMUST00000223066 5194 ntBASIC7.23□□□□□ -1.25
ClpbQ60649 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ClpbQ60649 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
ClpbQ60649 Gm37745-201ENSMUST00000193304 8163 ntBASIC7.23□□□□□ -1.25
ClpbQ60649 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
ClpbQ60649 Olfr531-204ENSMUST00000217167 3874 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
ClpbQ60649 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
ClpbQ60649 Npr3-204ENSMUST00000228489 1969 ntBASIC7.22□□□□□ -1.25
ClpbQ60649 4933406L23Rik-201ENSMUST00000203567 1509 ntBASIC7.22□□□□□ -1.25
ClpbQ60649 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
ClpbQ60649 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
ClpbQ60649 Gm18194-202ENSMUST00000210952 3442 ntBASIC7.22□□□□□ -1.25
ClpbQ60649 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
ClpbQ60649 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
ClpbQ60649 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
ClpbQ60649 Serbp1-201ENSMUST00000042990 15474 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
ClpbQ60649 Igkv12-46-201ENSMUST00000103365 377 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
ClpbQ60649 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
ClpbQ60649 Gm13552-201ENSMUST00000118837 417 ntBASIC7.22□□□□□ -1.25
ClpbQ60649 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC7.22□□□□□ -1.25
ClpbQ60649 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
ClpbQ60649 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
ClpbQ60649 Mthfr-ps1-201ENSMUST00000174153 601 ntBASIC7.22□□□□□ -1.25
ClpbQ60649 Gm23187-201ENSMUST00000175746 86 ntBASIC7.22□□□□□ -1.25
ClpbQ60649 Gm20797-201ENSMUST00000177894 383 ntBASIC7.22□□□□□ -1.25
ClpbQ60649 Gm27019-201ENSMUST00000183056 404 ntBASIC7.22□□□□□ -1.25
ClpbQ60649 Mir8097-201ENSMUST00000185150 119 ntBASIC7.22□□□□□ -1.25
ClpbQ60649 Gm36945-201ENSMUST00000192040 864 ntTSL 3 BASIC7.22□□□□□ -1.25
ClpbQ60649 Gm37270-201ENSMUST00000194277 330 ntBASIC7.22□□□□□ -1.25
ClpbQ60649 Gm37729-201ENSMUST00000194761 1172 ntBASIC7.22□□□□□ -1.25
ClpbQ60649 Gm37102-201ENSMUST00000195740 1105 ntBASIC7.22□□□□□ -1.25
ClpbQ60649 Gm42573-201ENSMUST00000202327 478 ntBASIC7.22□□□□□ -1.25
ClpbQ60649 Gm19172-201ENSMUST00000203170 1246 ntBASIC7.22□□□□□ -1.25
ClpbQ60649 Gm18484-201ENSMUST00000204389 991 ntBASIC7.22□□□□□ -1.25
ClpbQ60649 E230032D23Rik-202ENSMUST00000207959 451 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
ClpbQ60649 Gm45276-201ENSMUST00000209549 1086 ntBASIC7.22□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms