Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 AC154522.1-201ENSMUST00000224647 1903 ntBASIC8.88□□□□□ -0.99
Vps54Q5SPW0 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Vps54Q5SPW0 AC166574.1-201ENSMUST00000226916 1309 ntBASIC8.87□□□□□ -0.99
Vps54Q5SPW0 Gm25546-201ENSMUST00000103977 132 ntBASIC8.87□□□□□ -0.99
Vps54Q5SPW0 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Vps54Q5SPW0 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Vps54Q5SPW0 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Vps54Q5SPW0 Gm27401-201ENSMUST00000184052 173 ntBASIC8.87□□□□□ -0.99
Vps54Q5SPW0 Gm28119-201ENSMUST00000185538 298 ntTSL 5 BASIC8.87□□□□□ -0.99
Vps54Q5SPW0 Gm7341-201ENSMUST00000192183 926 ntBASIC8.87□□□□□ -0.99
Vps54Q5SPW0 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC8.87□□□□□ -0.99
Vps54Q5SPW0 Gm2089-201ENSMUST00000218294 479 ntBASIC8.87□□□□□ -0.99
Vps54Q5SPW0 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Vps54Q5SPW0 AC116502.1-201ENSMUST00000220989 291 ntBASIC8.87□□□□□ -0.99
Vps54Q5SPW0 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC8.87□□□□□ -0.99
Vps54Q5SPW0 AC133598.2-201ENSMUST00000224302 624 ntBASIC8.87□□□□□ -0.99
Vps54Q5SPW0 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Vps54Q5SPW0 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC8.87□□□□□ -0.99
Vps54Q5SPW0 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC8.87□□□□□ -0.99
Vps54Q5SPW0 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Vps54Q5SPW0 Stox2-202ENSMUST00000110367 3424 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Vps54Q5SPW0 AC166574.5-201ENSMUST00000227438 1432 ntBASIC8.87□□□□□ -0.99
Vps54Q5SPW0 Nt5dc1-203ENSMUST00000105512 2727 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Vps54Q5SPW0 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Vps54Q5SPW0 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Vps54Q5SPW0 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Vps54Q5SPW0 AI427809-203ENSMUST00000123127 2033 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Vps54Q5SPW0 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Vps54Q5SPW0 Gm43618-201ENSMUST00000197392 3451 ntBASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC8.86□□□□□ -0.99
Vps54Q5SPW0 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Hmcn2-201ENSMUST00000113532 15646 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Bbx-208ENSMUST00000138166 8743 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Ikbkg-217ENSMUST00000164101 6788 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Ikbkg-218ENSMUST00000180230 6785 ntAPPRIS P3 TSL 5 BASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Gm6185-202ENSMUST00000212885 2692 ntTSL 5 BASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Apobec1-203ENSMUST00000112587 2072 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Gm14035-201ENSMUST00000117596 1475 ntBASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Gm25916-201ENSMUST00000104263 131 ntBASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Cypt3-202ENSMUST00000112573 669 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Gm14279-201ENSMUST00000117142 332 ntBASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Gm10243-201ENSMUST00000117571 333 ntBASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Gm13130-201ENSMUST00000119195 1166 ntBASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Gm11945-201ENSMUST00000120551 476 ntBASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Gm16573-201ENSMUST00000160334 801 ntTSL 3 BASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Gm19035-202ENSMUST00000194575 959 ntBASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Ighv8-15-201ENSMUST00000197770 294 ntBASIC8.86□□□□□ -0.99
Vps54Q5SPW0 AC132590.1-201ENSMUST00000224374 1164 ntBASIC8.86□□□□□ -0.99
Vps54Q5SPW0 AC154692.1-202ENSMUST00000226632 1231 ntBASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Gm10247-201ENSMUST00000090395 333 ntBASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Slc4a8-201ENSMUST00000023776 11790 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Plch1-208ENSMUST00000160638 6271 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Gm13106-201ENSMUST00000119045 1443 ntBASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Garnl3-202ENSMUST00000102810 3578 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Vps54Q5SPW0 Gm37022-201ENSMUST00000192517 2254 ntBASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Gm43429-201ENSMUST00000197889 2251 ntBASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Olfr686-204ENSMUST00000216613 2613 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Dock8-201ENSMUST00000025831 7810 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Gm37043-201ENSMUST00000194609 3105 ntBASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Zp2-205ENSMUST00000208874 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Gm6350-201ENSMUST00000195099 1339 ntBASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Rreb1-210ENSMUST00000149745 4320 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Olfr1-201ENSMUST00000120303 3433 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Trpm6-201ENSMUST00000040489 6508 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Rbpj-201ENSMUST00000037618 5459 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC8.85□□□□□ -0.99
Vps54Q5SPW0 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Gm43168-201ENSMUST00000201039 1612 ntBASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Plec-205ENSMUST00000073418 15455 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Akap13-201ENSMUST00000166315 12543 ntAPPRIS P2 TSL 5 BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Serpina3h-202ENSMUST00000116393 1226 ntBASIC8.85□□□□□ -0.99
Vps54Q5SPW0 Gm15422-201ENSMUST00000117453 541 ntBASIC8.85□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms