Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Gimd1-201ENSMUST00000163241 1413 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Dnajc8-202ENSMUST00000094657 1401 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Glrb-206ENSMUST00000194085 1341 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim43aQ3TL54 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Ccdc163-203ENSMUST00000106463 1159 ntAPPRIS P2 TSL 5 BASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Rgs8-204ENSMUST00000111814 678 ntTSL 3 BASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Fau-ps2-201ENSMUST00000119333 371 ntBASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Gm15928-201ENSMUST00000122455 280 ntBASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Gm24011-201ENSMUST00000157732 268 ntBASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Gm25266-201ENSMUST00000158521 304 ntBASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Scgb2b20-201ENSMUST00000179248 523 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Gm25947-201ENSMUST00000180343 110 ntBASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Mir8097-201ENSMUST00000185150 119 ntBASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Scgb2b18-201ENSMUST00000186529 523 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Scgb2b11-201ENSMUST00000188293 523 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Gm29126-201ENSMUST00000188686 151 ntBASIC7.88□□□□□ -1.15
Trim43aQ3TL54 5430433H01Rik-201ENSMUST00000193978 542 ntBASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Gm30275-201ENSMUST00000197620 498 ntTSL 2 BASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Gm7285-201ENSMUST00000198801 580 ntBASIC7.88□□□□□ -1.15
Trim43aQ3TL54 AC132474.3-201ENSMUST00000213244 383 ntTSL 5 BASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Gm39456-201ENSMUST00000214759 1019 ntTSL 5 BASIC7.88□□□□□ -1.15
Trim43aQ3TL54 AC163296.1-202ENSMUST00000218395 661 ntBASIC7.88□□□□□ -1.15
Trim43aQ3TL54 AC163296.1-201ENSMUST00000220004 1266 ntBASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Gm21321-201ENSMUST00000220179 446 ntBASIC7.88□□□□□ -1.15
Trim43aQ3TL54 AC122309.1-201ENSMUST00000226945 421 ntBASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Gm7086-202ENSMUST00000228849 506 ntBASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Olfr1449-201ENSMUST00000056005 948 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Gm4956-201ENSMUST00000082032 1148 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Gm22865-201ENSMUST00000083949 214 ntBASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Rps12-ps3-201ENSMUST00000086764 494 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Dmrtc1c2-202ENSMUST00000087899 717 ntAPPRIS P3 TSL 5 BASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Gm43113-201ENSMUST00000199713 1754 ntBASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Olfr75-ps1-202ENSMUST00000141956 2500 ntTSL 2 BASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Trim40-203ENSMUST00000172711 1539 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Gm14849-201ENSMUST00000122293 2846 ntBASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim43aQ3TL54 C87499-201ENSMUST00000053304 1901 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim43aQ3TL54 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC7.87□□□□□ -1.15
Trim43aQ3TL54 Gm38263-201ENSMUST00000195879 3059 ntBASIC7.87□□□□□ -1.15
Trim43aQ3TL54 Gm10623-201ENSMUST00000209081 2639 ntBASIC7.87□□□□□ -1.15
Trim43aQ3TL54 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC7.87□□□□□ -1.15
Trim43aQ3TL54 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Trim43aQ3TL54 Gm42603-201ENSMUST00000199893 2146 ntBASIC7.87□□□□□ -1.15
Trim43aQ3TL54 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Trim43aQ3TL54 Gm8836-201ENSMUST00000198196 1348 ntBASIC7.87□□□□□ -1.15
Trim43aQ3TL54 Gm5605-201ENSMUST00000208940 1305 ntBASIC7.87□□□□□ -1.15
Trim43aQ3TL54 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Trim43aQ3TL54 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC7.87□□□□□ -1.15
Trim43aQ3TL54 Pilrb1-201ENSMUST00000110978 1020 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim43aQ3TL54 Gm11646-201ENSMUST00000135857 397 ntTSL 3 BASIC7.87□□□□□ -1.15
Trim43aQ3TL54 Gm11695-201ENSMUST00000144230 407 ntTSL 2 BASIC7.87□□□□□ -1.15
Trim43aQ3TL54 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC7.87□□□□□ -1.15
Trim43aQ3TL54 Mir1983-201ENSMUST00000157523 132 ntBASIC7.87□□□□□ -1.15
Trim43aQ3TL54 Gm20702-201ENSMUST00000176181 460 ntBASIC7.87□□□□□ -1.15
Trim43aQ3TL54 Mark1-ps3-201ENSMUST00000184922 694 ntBASIC7.87□□□□□ -1.15
Trim43aQ3TL54 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC7.87□□□□□ -1.15
Trim43aQ3TL54 Mir1897-202ENSMUST00000198006 79 ntBASIC7.87□□□□□ -1.15
Trim43aQ3TL54 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC7.87□□□□□ -1.15
Trim43aQ3TL54 Gm43694-201ENSMUST00000200773 1119 ntBASIC7.87□□□□□ -1.15
Trim43aQ3TL54 Gm7478-201ENSMUST00000201054 581 ntBASIC7.87□□□□□ -1.15
Trim43aQ3TL54 Gm42887-201ENSMUST00000202469 1119 ntBASIC7.87□□□□□ -1.15
Trim43aQ3TL54 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC7.87□□□□□ -1.15
Trim43aQ3TL54 Gm4259-201ENSMUST00000206489 758 ntBASIC7.87□□□□□ -1.15
Trim43aQ3TL54 Il15-203ENSMUST00000209573 1164 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Trim43aQ3TL54 Gm32486-201ENSMUST00000209810 3816 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Trim43aQ3TL54 2310008N11Rik-202ENSMUST00000210263 422 ntTSL 3 BASIC7.87□□□□□ -1.15
Trim43aQ3TL54 AC154307.1-201ENSMUST00000214799 90 ntBASIC7.87□□□□□ -1.15
Trim43aQ3TL54 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Trim43aQ3TL54 AC102689.1-201ENSMUST00000220511 1090 ntBASIC7.87□□□□□ -1.15
Trim43aQ3TL54 AC154760.1-201ENSMUST00000227218 673 ntBASIC7.87□□□□□ -1.15
Trim43aQ3TL54 Asb12-201ENSMUST00000033549 1258 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim43aQ3TL54 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim43aQ3TL54 Wac-202ENSMUST00000092112 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim43aQ3TL54 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC7.87□□□□□ -1.15
Trim43aQ3TL54 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Trim43aQ3TL54 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim43aQ3TL54 Gm44022-201ENSMUST00000203708 5429 ntBASIC7.87□□□□□ -1.15
Trim43aQ3TL54 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Trim43aQ3TL54 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim43aQ3TL54 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim43aQ3TL54 AC124675.1-201ENSMUST00000226263 1390 ntBASIC7.86□□□□□ -1.15
Trim43aQ3TL54 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms