Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Rrm1-201ENSMUST00000033283 3997 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Cntn3Q07409 Ap3m2-204ENSMUST00000210656 3373 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Cntn3Q07409 Med13l-202ENSMUST00000201010 7781 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Cntn3Q07409 Cntn5-205ENSMUST00000179049 2682 ntTSL 5 BASIC8.32□□□□□ -1.08
Cntn3Q07409 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Cntn3Q07409 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Cntn3Q07409 AC153564.1-201ENSMUST00000217771 3607 ntTSL 5 BASIC8.32□□□□□ -1.08
Cntn3Q07409 Gm45084-201ENSMUST00000207096 1957 ntBASIC8.32□□□□□ -1.08
Cntn3Q07409 Bbx-208ENSMUST00000138166 8743 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Cntn3Q07409 Arhgap17-204ENSMUST00000205262 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Cntn3Q07409 Xrn2-201ENSMUST00000028921 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Cntn3Q07409 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Cntn3Q07409 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Cntn3Q07409 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Cntn3Q07409 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Cntn3Q07409 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Cntn3Q07409 Fau-ps2-201ENSMUST00000119333 371 ntBASIC8.32□□□□□ -1.08
Cntn3Q07409 Gm15049-201ENSMUST00000120474 463 ntBASIC8.32□□□□□ -1.08
Cntn3Q07409 Gm11809-201ENSMUST00000120923 950 ntBASIC8.32□□□□□ -1.08
Cntn3Q07409 Gm13726-201ENSMUST00000121278 794 ntBASIC8.32□□□□□ -1.08
Cntn3Q07409 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC8.32□□□□□ -1.08
Cntn3Q07409 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC8.32□□□□□ -1.08
Cntn3Q07409 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Cntn3Q07409 Gm12126-201ENSMUST00000147717 619 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Cntn3Q07409 Mllt3-208ENSMUST00000149357 794 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Cntn3Q07409 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Cntn3Q07409 Gm24883-201ENSMUST00000158391 281 ntBASIC8.32□□□□□ -1.08
Cntn3Q07409 Gm22424-201ENSMUST00000158527 87 ntBASIC8.32□□□□□ -1.08
Cntn3Q07409 Gm4907-202ENSMUST00000163718 1236 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Cntn3Q07409 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Cntn3Q07409 Trav9d-4-201ENSMUST00000167409 307 ntAPPRIS ALT2 BASIC8.32□□□□□ -1.08
Cntn3Q07409 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Cntn3Q07409 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Cntn3Q07409 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Cntn3Q07409 Gm37339-201ENSMUST00000194142 392 ntBASIC8.32□□□□□ -1.08
Cntn3Q07409 Mypopos-204ENSMUST00000206381 473 ntTSL 2 BASIC8.32□□□□□ -1.08
Cntn3Q07409 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
Cntn3Q07409 Gm7688-201ENSMUST00000212857 337 ntBASIC8.32□□□□□ -1.08
Cntn3Q07409 Thy1-204ENSMUST00000214627 446 ntTSL 3 BASIC8.32□□□□□ -1.08
Cntn3Q07409 AC155259.1-201ENSMUST00000214794 477 ntBASIC8.32□□□□□ -1.08
Cntn3Q07409 AC152819.1-201ENSMUST00000220435 871 ntTSL 5 BASIC8.32□□□□□ -1.08
Cntn3Q07409 AC154633.1-201ENSMUST00000223276 449 ntBASIC8.32□□□□□ -1.08
Cntn3Q07409 AC154747.4-202ENSMUST00000223826 852 ntBASIC8.32□□□□□ -1.08
Cntn3Q07409 AC121542.1-201ENSMUST00000227245 721 ntBASIC8.32□□□□□ -1.08
Cntn3Q07409 AC164295.2-201ENSMUST00000228539 757 ntBASIC8.32□□□□□ -1.08
Cntn3Q07409 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Cntn3Q07409 Gm5316-201ENSMUST00000050391 270 ntBASIC8.32□□□□□ -1.08
Cntn3Q07409 Olfr888-201ENSMUST00000075228 945 ntBASIC8.32□□□□□ -1.08
Cntn3Q07409 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Cntn3Q07409 Timp1-201ENSMUST00000009530 833 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Cntn3Q07409 Gm28892-201ENSMUST00000188123 2721 ntTSL 5 BASIC8.32□□□□□ -1.08
Cntn3Q07409 Gm9125-202ENSMUST00000180746 2325 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Cntn3Q07409 Gm9117-202ENSMUST00000193529 2325 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Cntn3Q07409 Gm36737-201ENSMUST00000209653 2189 ntTSL 5 BASIC8.32□□□□□ -1.08
Cntn3Q07409 Mctp2-201ENSMUST00000079323 5802 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Cntn3Q07409 Gm43507-202ENSMUST00000200281 2011 ntTSL 5 BASIC8.32□□□□□ -1.08
Cntn3Q07409 Gm4451-201ENSMUST00000186000 1891 ntBASIC8.32□□□□□ -1.08
Cntn3Q07409 1700027J07Rik-203ENSMUST00000217501 1884 ntTSL 5 BASIC8.32□□□□□ -1.08
Cntn3Q07409 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC8.32□□□□□ -1.08
Cntn3Q07409 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC8.32□□□□□ -1.08
Cntn3Q07409 Smarcal1-207ENSMUST00000152225 2994 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cntn3Q07409 Sbno1-216ENSMUST00000199808 10161 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cntn3Q07409 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cntn3Q07409 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cntn3Q07409 Smarca1-203ENSMUST00000101616 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cntn3Q07409 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Cntn3Q07409 Gm44550-201ENSMUST00000207311 2058 ntBASIC8.31□□□□□ -1.08
Cntn3Q07409 Vmn2r92-201ENSMUST00000169686 2583 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Cntn3Q07409 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cntn3Q07409 AC164883.2-201ENSMUST00000227931 3815 ntBASIC8.31□□□□□ -1.08
Cntn3Q07409 Tecta-201ENSMUST00000042190 7338 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cntn3Q07409 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC8.31□□□□□ -1.08
Cntn3Q07409 Fgg-201ENSMUST00000048486 1695 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Cntn3Q07409 Polk-210ENSMUST00000222389 1404 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Cntn3Q07409 Mast4-212ENSMUST00000171791 7647 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Cntn3Q07409 Btbd10-202ENSMUST00000117577 2384 ntAPPRIS ALT1 TSL 5 BASIC8.31□□□□□ -1.08
Cntn3Q07409 Mrps18c-202ENSMUST00000112898 460 ntTSL 3 BASIC8.31□□□□□ -1.08
Cntn3Q07409 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC8.31□□□□□ -1.08
Cntn3Q07409 Gm14749-201ENSMUST00000121269 333 ntBASIC8.31□□□□□ -1.08
Cntn3Q07409 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC8.31□□□□□ -1.08
Cntn3Q07409 4930594O21Rik-202ENSMUST00000144981 682 ntTSL 3 BASIC8.31□□□□□ -1.08
Cntn3Q07409 Gm11632-201ENSMUST00000145489 674 ntTSL 3 BASIC8.31□□□□□ -1.08
Cntn3Q07409 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC8.31□□□□□ -1.08
Cntn3Q07409 Gm25372-201ENSMUST00000158161 255 ntBASIC8.31□□□□□ -1.08
Cntn3Q07409 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC8.31□□□□□ -1.08
Cntn3Q07409 0610012D04Rik-201ENSMUST00000159031 531 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Cntn3Q07409 Gm5350-201ENSMUST00000182057 1002 ntBASIC8.31□□□□□ -1.08
Cntn3Q07409 Gm27762-201ENSMUST00000183417 109 ntBASIC8.31□□□□□ -1.08
Cntn3Q07409 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC8.31□□□□□ -1.08
Cntn3Q07409 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC8.31□□□□□ -1.08
Cntn3Q07409 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC8.31□□□□□ -1.08
Cntn3Q07409 Gm38226-201ENSMUST00000192207 521 ntBASIC8.31□□□□□ -1.08
Cntn3Q07409 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC8.31□□□□□ -1.08
Cntn3Q07409 1700039M15Rik-201ENSMUST00000195377 1120 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Cntn3Q07409 Gm43550-201ENSMUST00000200597 303 ntBASIC8.31□□□□□ -1.08
Cntn3Q07409 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC8.31□□□□□ -1.08
Cntn3Q07409 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC8.31□□□□□ -1.08
Cntn3Q07409 Olfr1348-204ENSMUST00000208066 1135 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Cntn3Q07409 Gm6579-201ENSMUST00000208224 865 ntBASIC8.31□□□□□ -1.08
Cntn3Q07409 Gm18378-201ENSMUST00000216245 628 ntBASIC8.31□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms