Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm16409-201ENSMUST00000100510 747 ntBASIC8.54□□□□□ -1.04
Hmgb1P63158 Gm23192-201ENSMUST00000102434 96 ntBASIC8.54□□□□□ -1.04
Hmgb1P63158 Lypd8-202ENSMUST00000108826 1219 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Hmgb1P63158 Gm13352-201ENSMUST00000117515 262 ntBASIC8.54□□□□□ -1.04
Hmgb1P63158 Rps6-ps4-201ENSMUST00000118499 750 ntBASIC8.54□□□□□ -1.04
Hmgb1P63158 Gm9143-201ENSMUST00000120745 745 ntBASIC8.54□□□□□ -1.04
Hmgb1P63158 Gm8172-201ENSMUST00000120762 750 ntBASIC8.54□□□□□ -1.04
Hmgb1P63158 Gm22226-201ENSMUST00000157355 109 ntBASIC8.54□□□□□ -1.04
Hmgb1P63158 Gm17233-201ENSMUST00000168470 698 ntTSL 3 BASIC8.54□□□□□ -1.04
Hmgb1P63158 Gm21293-201ENSMUST00000170919 864 ntTSL 5 BASIC8.54□□□□□ -1.04
Hmgb1P63158 1700039M10Rik-201ENSMUST00000180397 532 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Hmgb1P63158 Mir6999-201ENSMUST00000183498 61 ntBASIC8.54□□□□□ -1.04
Hmgb1P63158 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
Hmgb1P63158 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Hmgb1P63158 Gm7560-201ENSMUST00000187748 873 ntBASIC8.54□□□□□ -1.04
Hmgb1P63158 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Hmgb1P63158 Ighv5-1-201ENSMUST00000193324 353 ntBASIC8.54□□□□□ -1.04
Hmgb1P63158 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC8.54□□□□□ -1.04
Hmgb1P63158 Gm5857-201ENSMUST00000198953 493 ntBASIC8.54□□□□□ -1.04
Hmgb1P63158 Gm42861-201ENSMUST00000199596 634 ntBASIC8.54□□□□□ -1.04
Hmgb1P63158 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Hmgb1P63158 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Hmgb1P63158 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC8.54□□□□□ -1.04
Hmgb1P63158 Gm45693-201ENSMUST00000211391 1157 ntBASIC8.54□□□□□ -1.04
Hmgb1P63158 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC8.54□□□□□ -1.04
Hmgb1P63158 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC8.54□□□□□ -1.04
Hmgb1P63158 Gm3213-201ENSMUST00000219296 441 ntBASIC8.54□□□□□ -1.04
Hmgb1P63158 Gm19186-201ENSMUST00000219922 333 ntBASIC8.54□□□□□ -1.04
Hmgb1P63158 AC124686.1-201ENSMUST00000225546 522 ntBASIC8.54□□□□□ -1.04
Hmgb1P63158 1700018F24Rik-201ENSMUST00000031624 1122 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Hmgb1P63158 Rps6-ps2-201ENSMUST00000079841 747 ntBASIC8.54□□□□□ -1.04
Hmgb1P63158 Ighv1-13-201ENSMUST00000095364 294 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Hmgb1P63158 Dis3l-202ENSMUST00000113890 3224 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Hmgb1P63158 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Hmgb1P63158 Musk-208ENSMUST00000179951 3376 ntTSL 5 BASIC8.54□□□□□ -1.04
Hmgb1P63158 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Hmgb1P63158 CT010514.1-201ENSMUST00000214088 2969 ntBASIC8.54□□□□□ -1.04
Hmgb1P63158 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Hmgb1P63158 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Hmgb1P63158 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC8.54□□□□□ -1.04
Hmgb1P63158 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Hmgb1P63158 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Hmgb1P63158 Zfp809-205ENSMUST00000215618 1313 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Hmgb1P63158 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hmgb1P63158 Gm36694-201ENSMUST00000205855 2719 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hmgb1P63158 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hmgb1P63158 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC8.53□□□□□ -1.04
Hmgb1P63158 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC8.53□□□□□ -1.04
Hmgb1P63158 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Hmgb1P63158 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hmgb1P63158 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC8.53□□□□□ -1.04
Hmgb1P63158 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Hmgb1P63158 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hmgb1P63158 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hmgb1P63158 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC8.53□□□□□ -1.04
Hmgb1P63158 Trav9-2-201ENSMUST00000103654 563 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Hmgb1P63158 Gm13573-201ENSMUST00000116410 631 ntBASIC8.53□□□□□ -1.04
Hmgb1P63158 Gm13255-201ENSMUST00000117255 547 ntBASIC8.53□□□□□ -1.04
Hmgb1P63158 Gm12310-201ENSMUST00000118013 492 ntBASIC8.53□□□□□ -1.04
Hmgb1P63158 Gm8688-201ENSMUST00000118240 969 ntBASIC8.53□□□□□ -1.04
Hmgb1P63158 Gm12024-201ENSMUST00000118819 1253 ntBASIC8.53□□□□□ -1.04
Hmgb1P63158 Gm13674-201ENSMUST00000121276 823 ntBASIC8.53□□□□□ -1.04
Hmgb1P63158 4930439A04Rik-201ENSMUST00000137241 739 ntTSL 3 BASIC8.53□□□□□ -1.04
Hmgb1P63158 Gm5698-201ENSMUST00000178317 724 ntBASIC8.53□□□□□ -1.04
Hmgb1P63158 Tmem147os-201ENSMUST00000180820 1276 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hmgb1P63158 Mir6374-201ENSMUST00000184003 107 ntBASIC8.53□□□□□ -1.04
Hmgb1P63158 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC8.53□□□□□ -1.04
Hmgb1P63158 4930449E01Rik-202ENSMUST00000188698 532 ntTSL 3 BASIC8.53□□□□□ -1.04
Hmgb1P63158 Gm17867-201ENSMUST00000188981 391 ntBASIC8.53□□□□□ -1.04
Hmgb1P63158 Gm37185-201ENSMUST00000193852 410 ntBASIC8.53□□□□□ -1.04
Hmgb1P63158 Gm43974-201ENSMUST00000205080 684 ntBASIC8.53□□□□□ -1.04
Hmgb1P63158 Gm45157-201ENSMUST00000208729 401 ntBASIC8.53□□□□□ -1.04
Hmgb1P63158 Gm45475-201ENSMUST00000209381 309 ntBASIC8.53□□□□□ -1.04
Hmgb1P63158 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC8.53□□□□□ -1.04
Hmgb1P63158 AC110816.1-201ENSMUST00000218559 980 ntBASIC8.53□□□□□ -1.04
Hmgb1P63158 AC123867.1-201ENSMUST00000224990 816 ntBASIC8.53□□□□□ -1.04
Hmgb1P63158 AC124196.1-201ENSMUST00000225970 1032 ntBASIC8.53□□□□□ -1.04
Hmgb1P63158 AC107452.2-201ENSMUST00000228415 363 ntBASIC8.53□□□□□ -1.04
Hmgb1P63158 Eif3k-201ENSMUST00000066070 774 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hmgb1P63158 Gm38156-201ENSMUST00000194601 2260 ntBASIC8.53□□□□□ -1.04
Hmgb1P63158 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC8.53□□□□□ -1.04
Hmgb1P63158 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hmgb1P63158 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hmgb1P63158 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Hmgb1P63158 Gm15083-201ENSMUST00000138670 1413 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hmgb1P63158 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hmgb1P63158 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hmgb1P63158 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Hmgb1P63158 Gm5702-201ENSMUST00000185629 2469 ntBASIC8.53□□□□□ -1.04
Hmgb1P63158 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hmgb1P63158 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hmgb1P63158 Tespa1-201ENSMUST00000042586 1663 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hmgb1P63158 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hmgb1P63158 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Hmgb1P63158 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.04
Hmgb1P63158 Erp44-201ENSMUST00000030028 2624 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Hmgb1P63158 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.04
Hmgb1P63158 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.04
Hmgb1P63158 Gm31614-201ENSMUST00000215504 3231 ntTSL 5 BASIC8.52□□□□□ -1.04
Hmgb1P63158 AC168056.3-201ENSMUST00000225395 2540 ntBASIC8.52□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms