Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Tpm1P58771 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Tpm1P58771 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC8.19□□□□□ -1.1
Tpm1P58771 Gm28379-202ENSMUST00000187676 2896 ntBASIC8.19□□□□□ -1.1
Tpm1P58771 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Tpm1P58771 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Tpm1P58771 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Tpm1P58771 Gm11907-201ENSMUST00000118918 1007 ntBASIC8.19□□□□□ -1.1
Tpm1P58771 Gm12993-201ENSMUST00000119900 479 ntBASIC8.19□□□□□ -1.1
Tpm1P58771 Gm14034-201ENSMUST00000120147 551 ntBASIC8.19□□□□□ -1.1
Tpm1P58771 n-R5s76-201ENSMUST00000122700 113 ntBASIC8.19□□□□□ -1.1
Tpm1P58771 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Tpm1P58771 Gm16015-201ENSMUST00000154897 390 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Tpm1P58771 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Tpm1P58771 Gm6465-201ENSMUST00000168154 1098 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Tpm1P58771 Lgals1-ps2-201ENSMUST00000170221 519 ntBASIC8.19□□□□□ -1.1
Tpm1P58771 Tmem147os-201ENSMUST00000180820 1276 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Tpm1P58771 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Tpm1P58771 Gm28821-201ENSMUST00000185637 610 ntTSL 3 BASIC8.19□□□□□ -1.1
Tpm1P58771 Tmem265-202ENSMUST00000190278 587 ntTSL 3 BASIC8.19□□□□□ -1.1
Tpm1P58771 Gm44471-201ENSMUST00000197963 100 ntBASIC8.19□□□□□ -1.1
Tpm1P58771 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC8.19□□□□□ -1.1
Tpm1P58771 Iglc1-201ENSMUST00000200568 454 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Tpm1P58771 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC8.19□□□□□ -1.1
Tpm1P58771 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC8.19□□□□□ -1.1
Tpm1P58771 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC8.19□□□□□ -1.1
Tpm1P58771 AC119987.1-201ENSMUST00000212316 848 ntBASIC8.19□□□□□ -1.1
Tpm1P58771 AC124715.2-201ENSMUST00000226762 617 ntBASIC8.19□□□□□ -1.1
Tpm1P58771 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Tpm1P58771 Glipr1-201ENSMUST00000074805 1081 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Tpm1P58771 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Tpm1P58771 Gm17541-201ENSMUST00000080062 525 ntBASIC8.19□□□□□ -1.1
Tpm1P58771 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Tpm1P58771 Ica1l-206ENSMUST00000191251 3415 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Tpm1P58771 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Tpm1P58771 Gm37968-201ENSMUST00000195131 3201 ntBASIC8.19□□□□□ -1.1
Tpm1P58771 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Tpm1P58771 AC122346.1-201ENSMUST00000225266 3732 ntBASIC8.19□□□□□ -1.1
Tpm1P58771 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Tpm1P58771 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Tpm1P58771 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC8.19□□□□□ -1.1
Tpm1P58771 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC8.18□□□□□ -1.1
Tpm1P58771 Hsdl2-202ENSMUST00000107528 2626 ntTSL 2 BASIC8.18□□□□□ -1.1
Tpm1P58771 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Tpm1P58771 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC8.18□□□□□ -1.1
Tpm1P58771 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
Tpm1P58771 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC8.18□□□□□ -1.1
Tpm1P58771 Gm38009-201ENSMUST00000194884 3341 ntBASIC8.18□□□□□ -1.1
Tpm1P58771 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Tpm1P58771 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Tpm1P58771 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Tpm1P58771 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Tpm1P58771 Gm36930-201ENSMUST00000195431 2376 ntBASIC8.18□□□□□ -1.1
Tpm1P58771 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Tpm1P58771 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Tpm1P58771 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC8.18□□□□□ -1.1
Tpm1P58771 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Tpm1P58771 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
Tpm1P58771 Gm11343-201ENSMUST00000120579 599 ntBASIC8.18□□□□□ -1.1
Tpm1P58771 Gm24899-201ENSMUST00000158892 73 ntBASIC8.18□□□□□ -1.1
Tpm1P58771 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Tpm1P58771 Gm7734-201ENSMUST00000182832 1011 ntBASIC8.18□□□□□ -1.1
Tpm1P58771 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC8.18□□□□□ -1.1
Tpm1P58771 Gm45672-201ENSMUST00000209700 768 ntTSL 3 BASIC8.18□□□□□ -1.1
Tpm1P58771 CT009728.1-201ENSMUST00000225228 1050 ntBASIC8.18□□□□□ -1.1
Tpm1P58771 Pcp4-201ENSMUST00000061739 641 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Tpm1P58771 Iba57-202ENSMUST00000069631 864 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Tpm1P58771 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
Tpm1P58771 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC8.18□□□□□ -1.1
Tpm1P58771 Gm29601-201ENSMUST00000187961 1349 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Tpm1P58771 Gm12253-201ENSMUST00000108825 1356 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Tpm1P58771 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Tpm1P58771 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC8.18□□□□□ -1.1
Tpm1P58771 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Tpm1P58771 Gm44863-201ENSMUST00000207613 1422 ntBASIC8.18□□□□□ -1.1
Tpm1P58771 Gm43606-201ENSMUST00000195938 3556 ntBASIC8.18□□□□□ -1.1
Tpm1P58771 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Tpm1P58771 Ssr3-201ENSMUST00000029414 2957 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Tpm1P58771 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
Tpm1P58771 Fam83b-202ENSMUST00000183437 3879 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Tpm1P58771 Gm45516-201ENSMUST00000211588 4182 ntBASIC8.18□□□□□ -1.1
Tpm1P58771 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Tpm1P58771 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Tpm1P58771 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC8.17□□□□□ -1.1
Tpm1P58771 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Tpm1P58771 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC8.17□□□□□ -1.1
Tpm1P58771 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Tpm1P58771 Gm15950-201ENSMUST00000162902 1973 ntBASIC8.17□□□□□ -1.1
Tpm1P58771 Gm37347-201ENSMUST00000193969 3071 ntBASIC8.17□□□□□ -1.1
Tpm1P58771 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Tpm1P58771 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Tpm1P58771 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Tpm1P58771 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Tpm1P58771 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Tpm1P58771 Gm23192-201ENSMUST00000102434 96 ntBASIC8.17□□□□□ -1.1
Tpm1P58771 Pilrb1-201ENSMUST00000110978 1020 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Tpm1P58771 Gm13458-201ENSMUST00000118239 367 ntBASIC8.17□□□□□ -1.1
Tpm1P58771 Gm4918-201ENSMUST00000119420 1084 ntBASIC8.17□□□□□ -1.1
Tpm1P58771 Gm14749-201ENSMUST00000121269 333 ntBASIC8.17□□□□□ -1.1
Tpm1P58771 Gm15668-201ENSMUST00000140506 678 ntTSL 3 BASIC8.17□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms