Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC9.48□□□□□ -0.89
Msh6P54276 Gm16113-201ENSMUST00000159629 372 ntBASIC9.48□□□□□ -0.89
Msh6P54276 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Msh6P54276 Mir8105-201ENSMUST00000184718 89 ntBASIC9.48□□□□□ -0.89
Msh6P54276 Gm19480-201ENSMUST00000185547 667 ntBASIC9.48□□□□□ -0.89
Msh6P54276 AC151967.1-201ENSMUST00000198146 76 ntBASIC9.48□□□□□ -0.89
Msh6P54276 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC9.48□□□□□ -0.89
Msh6P54276 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC9.48□□□□□ -0.89
Msh6P54276 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC9.48□□□□□ -0.89
Msh6P54276 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Msh6P54276 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Msh6P54276 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Msh6P54276 Pik3cg-202ENSMUST00000085469 4584 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Msh6P54276 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Msh6P54276 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC9.48□□□□□ -0.89
Msh6P54276 Pofut1-206ENSMUST00000123487 4143 ntTSL 2 BASIC9.48□□□□□ -0.89
Msh6P54276 Csnk1d-202ENSMUST00000070575 3500 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Msh6P54276 Sgcg-201ENSMUST00000077954 3515 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Msh6P54276 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Msh6P54276 Gcm2-201ENSMUST00000021791 3073 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Msh6P54276 Gm37382-201ENSMUST00000193032 1596 ntBASIC9.47□□□□□ -0.89
Msh6P54276 Tmem161b-206ENSMUST00000225069 2414 ntBASIC9.47□□□□□ -0.89
Msh6P54276 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC9.47□□□□□ -0.89
Msh6P54276 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Msh6P54276 Ctnnd1-212ENSMUST00000111686 6061 ntTSL 5 BASIC9.47□□□□□ -0.89
Msh6P54276 Cyp2c55-201ENSMUST00000025966 1995 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Msh6P54276 Farsb-201ENSMUST00000068333 1951 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Msh6P54276 Gm37022-201ENSMUST00000192517 2254 ntBASIC9.47□□□□□ -0.89
Msh6P54276 Gm44854-201ENSMUST00000205493 2340 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Msh6P54276 Trappc13-201ENSMUST00000022224 2342 ntAPPRIS P4 TSL 1 (best) BASIC9.47□□□□□ -0.89
Msh6P54276 Isy1-201ENSMUST00000089497 5837 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Msh6P54276 Olfr1124-202ENSMUST00000215909 2422 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Msh6P54276 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Msh6P54276 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC9.47□□□□□ -0.89
Msh6P54276 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Msh6P54276 Gm17170-201ENSMUST00000112785 316 ntBASIC9.47□□□□□ -0.89
Msh6P54276 Gm15484-201ENSMUST00000118871 828 ntBASIC9.47□□□□□ -0.89
Msh6P54276 Gm11338-201ENSMUST00000120086 1160 ntBASIC9.47□□□□□ -0.89
Msh6P54276 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Msh6P54276 Mir1932-201ENSMUST00000157390 90 ntBASIC9.47□□□□□ -0.89
Msh6P54276 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC9.47□□□□□ -0.89
Msh6P54276 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Msh6P54276 Gm25617-201ENSMUST00000179548 133 ntBASIC9.47□□□□□ -0.89
Msh6P54276 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Msh6P54276 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Msh6P54276 Gm5272-201ENSMUST00000182730 982 ntBASIC9.47□□□□□ -0.89
Msh6P54276 Mir6989-201ENSMUST00000184812 65 ntBASIC9.47□□□□□ -0.89
Msh6P54276 Gm28983-201ENSMUST00000186685 614 ntBASIC9.47□□□□□ -0.89
Msh6P54276 Gm28150-201ENSMUST00000187305 614 ntBASIC9.47□□□□□ -0.89
Msh6P54276 Gm28377-201ENSMUST00000189695 720 ntBASIC9.47□□□□□ -0.89
Msh6P54276 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC9.47□□□□□ -0.89
Msh6P54276 Gm25617-202ENSMUST00000198387 132 ntBASIC9.47□□□□□ -0.89
Msh6P54276 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC9.47□□□□□ -0.89
Msh6P54276 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC9.47□□□□□ -0.89
Msh6P54276 CT030182.4-201ENSMUST00000223647 645 ntBASIC9.47□□□□□ -0.89
Msh6P54276 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Msh6P54276 AC154627.1-201ENSMUST00000228799 1286 ntBASIC9.47□□□□□ -0.89
Msh6P54276 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Msh6P54276 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
Msh6P54276 Pogz-205ENSMUST00000107270 6399 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Msh6P54276 Sorbs1-211ENSMUST00000224667 4313 ntAPPRIS ALT2 BASIC9.47□□□□□ -0.89
Msh6P54276 Phc3-206ENSMUST00000129817 3019 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Msh6P54276 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Msh6P54276 Cers4-201ENSMUST00000008350 9475 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Msh6P54276 Setd5-202ENSMUST00000113155 6362 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Msh6P54276 Setd5-203ENSMUST00000113157 6527 ntTSL 5 BASIC9.47□□□□□ -0.89
Msh6P54276 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Msh6P54276 Large1-201ENSMUST00000004497 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Msh6P54276 Baz2a-208ENSMUST00000220049 8443 ntAPPRIS P2 TSL 5 BASIC9.46□□□□□ -0.89
Msh6P54276 Plec-208ENSMUST00000080857 14959 ntTSL 5 BASIC9.46□□□□□ -0.89
Msh6P54276 Plec-209ENSMUST00000089610 14972 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Msh6P54276 Pafah2-202ENSMUST00000105870 3180 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Msh6P54276 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Msh6P54276 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC9.46□□□□□ -0.89
Msh6P54276 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Msh6P54276 Rrp12-201ENSMUST00000038677 4319 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Msh6P54276 Olfr943-202ENSMUST00000213176 8275 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Msh6P54276 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Msh6P54276 Pik3ca-203ENSMUST00000108243 6689 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Msh6P54276 Gm8421-201ENSMUST00000119439 305 ntBASIC9.46□□□□□ -0.9
Msh6P54276 Gm16057-201ENSMUST00000120811 759 ntBASIC9.46□□□□□ -0.9
Msh6P54276 Gm12903-201ENSMUST00000121015 544 ntBASIC9.46□□□□□ -0.9
Msh6P54276 Gm14353-201ENSMUST00000122200 869 ntBASIC9.46□□□□□ -0.9
Msh6P54276 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC9.46□□□□□ -0.9
Msh6P54276 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC9.46□□□□□ -0.9
Msh6P54276 Gm11639-201ENSMUST00000148007 3613 ntTSL 5 BASIC9.46□□□□□ -0.9
Msh6P54276 Erich2os-201ENSMUST00000150702 608 ntTSL 5 BASIC9.46□□□□□ -0.9
Msh6P54276 Gm5611-201ENSMUST00000164523 852 ntBASIC9.46□□□□□ -0.9
Msh6P54276 Mir3078-201ENSMUST00000175231 87 ntBASIC9.46□□□□□ -0.9
Msh6P54276 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC9.46□□□□□ -0.9
Msh6P54276 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Msh6P54276 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC9.46□□□□□ -0.9
Msh6P54276 Gm37383-201ENSMUST00000191750 745 ntBASIC9.46□□□□□ -0.9
Msh6P54276 Gm37336-201ENSMUST00000192794 760 ntTSL 2 BASIC9.46□□□□□ -0.9
Msh6P54276 Gm37260-201ENSMUST00000193748 1251 ntBASIC9.46□□□□□ -0.9
Msh6P54276 Gm18957-201ENSMUST00000197623 1813 ntBASIC9.46□□□□□ -0.9
Msh6P54276 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC9.46□□□□□ -0.9
Msh6P54276 Gm18690-201ENSMUST00000204488 985 ntBASIC9.46□□□□□ -0.9
Msh6P54276 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC9.46□□□□□ -0.9
Msh6P54276 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms