Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Cnot2-204ENSMUST00000164088 2618 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Atxn1P54254 Nsun2-201ENSMUST00000022087 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Atxn1P54254 Sec16b-202ENSMUST00000086130 4661 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Atxn1P54254 Gm20110-201ENSMUST00000218263 2095 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Atxn1P54254 Mir680-1-201ENSMUST00000102257 109 ntBASIC7.6□□□□□ -1.19
Atxn1P54254 Gm23701-201ENSMUST00000103893 110 ntBASIC7.6□□□□□ -1.19
Atxn1P54254 Amd-ps4-201ENSMUST00000118392 1003 ntBASIC7.6□□□□□ -1.19
Atxn1P54254 Gm13552-201ENSMUST00000118837 417 ntBASIC7.6□□□□□ -1.19
Atxn1P54254 Gm15696-201ENSMUST00000121730 445 ntBASIC7.6□□□□□ -1.19
Atxn1P54254 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC7.6□□□□□ -1.19
Atxn1P54254 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC7.6□□□□□ -1.19
Atxn1P54254 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Atxn1P54254 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC7.6□□□□□ -1.19
Atxn1P54254 Gm26184-201ENSMUST00000157686 131 ntBASIC7.6□□□□□ -1.19
Atxn1P54254 Gm26025-201ENSMUST00000158655 271 ntBASIC7.6□□□□□ -1.19
Atxn1P54254 Mir6409-201ENSMUST00000184957 92 ntBASIC7.6□□□□□ -1.19
Atxn1P54254 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC7.6□□□□□ -1.19
Atxn1P54254 Gm29605-201ENSMUST00000190800 292 ntBASIC7.6□□□□□ -1.19
Atxn1P54254 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC7.6□□□□□ -1.19
Atxn1P54254 Gm17530-201ENSMUST00000194336 472 ntBASIC7.6□□□□□ -1.19
Atxn1P54254 AC099760.1-201ENSMUST00000196300 153 ntBASIC7.6□□□□□ -1.19
Atxn1P54254 Gm43558-201ENSMUST00000200155 210 ntBASIC7.6□□□□□ -1.19
Atxn1P54254 9330102E08Rik-201ENSMUST00000204642 3843 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Atxn1P54254 Gm2926-201ENSMUST00000205625 239 ntBASIC7.6□□□□□ -1.19
Atxn1P54254 Gm4585-201ENSMUST00000207218 452 ntBASIC7.6□□□□□ -1.19
Atxn1P54254 Gm33778-201ENSMUST00000216884 704 ntBASIC7.6□□□□□ -1.19
Atxn1P54254 Gm8275-201ENSMUST00000219732 424 ntBASIC7.6□□□□□ -1.19
Atxn1P54254 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Atxn1P54254 Gpr35-201ENSMUST00000027489 3270 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Atxn1P54254 Sos2-203ENSMUST00000182396 3963 ntTSL 5 BASIC7.6□□□□□ -1.19
Atxn1P54254 Adgrb3-205ENSMUST00000135518 5432 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Atxn1P54254 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Atxn1P54254 Gm46430-207ENSMUST00000222254 1703 ntTSL 5 BASIC7.6□□□□□ -1.19
Atxn1P54254 AC158537.1-201ENSMUST00000224637 1711 ntBASIC7.6□□□□□ -1.19
Atxn1P54254 Sptan1-202ENSMUST00000095083 7883 ntTSL 5 BASIC7.6□□□□□ -1.19
Atxn1P54254 Gm29654-201ENSMUST00000186886 2169 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Atxn1P54254 Gm28226-201ENSMUST00000186916 2169 ntTSL 5 BASIC7.6□□□□□ -1.19
Atxn1P54254 Rhoh-201ENSMUST00000031106 5093 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Atxn1P54254 Ptpn13-201ENSMUST00000048957 7915 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
Atxn1P54254 Cebpz-201ENSMUST00000024885 4074 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Atxn1P54254 AC171003.1-201ENSMUST00000221667 1665 ntBASIC7.6□□□□□ -1.19
Atxn1P54254 Pcmtd2-201ENSMUST00000029116 3569 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
Atxn1P54254 Gm26920-201ENSMUST00000182746 2374 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
Atxn1P54254 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Atxn1P54254 Gm42656-201ENSMUST00000201506 2305 ntBASIC7.6□□□□□ -1.19
Atxn1P54254 Znfx1-202ENSMUST00000067584 4147 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Atxn1P54254 Ift81-201ENSMUST00000031426 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Atxn1P54254 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
Atxn1P54254 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Atxn1P54254 5330413P13Rik-202ENSMUST00000143453 3630 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Atxn1P54254 Afm-201ENSMUST00000113179 2038 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Atxn1P54254 AC131743.4-201ENSMUST00000221638 1553 ntBASIC7.59□□□□□ -1.19
Atxn1P54254 Usp15-201ENSMUST00000020334 4666 ntAPPRIS ALT1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Atxn1P54254 Khdc1b-201ENSMUST00000147615 2236 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Atxn1P54254 Igsf1-203ENSMUST00000114891 1761 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Atxn1P54254 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Atxn1P54254 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Atxn1P54254 Gm5493-201ENSMUST00000182063 1952 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Atxn1P54254 Olfr1425-202ENSMUST00000214918 2178 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Atxn1P54254 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
Atxn1P54254 Clip4-201ENSMUST00000024854 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Atxn1P54254 A330015K06Rik-201ENSMUST00000195489 4286 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Atxn1P54254 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC7.59□□□□□ -1.19
Atxn1P54254 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC7.59□□□□□ -1.19
Atxn1P54254 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Atxn1P54254 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC7.59□□□□□ -1.19
Atxn1P54254 Gm22223-201ENSMUST00000157360 125 ntBASIC7.59□□□□□ -1.19
Atxn1P54254 Esd-203ENSMUST00000175887 809 ntTSL 5 BASIC7.59□□□□□ -1.19
Atxn1P54254 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Atxn1P54254 Mir6340-201ENSMUST00000183857 119 ntBASIC7.59□□□□□ -1.19
Atxn1P54254 Gm19480-201ENSMUST00000185547 667 ntBASIC7.59□□□□□ -1.19
Atxn1P54254 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC7.59□□□□□ -1.19
Atxn1P54254 Gm21181-201ENSMUST00000186249 330 ntBASIC7.59□□□□□ -1.19
Atxn1P54254 Gm38242-201ENSMUST00000192354 430 ntTSL 5 BASIC7.59□□□□□ -1.19
Atxn1P54254 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC7.59□□□□□ -1.19
Atxn1P54254 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC7.59□□□□□ -1.19
Atxn1P54254 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC7.59□□□□□ -1.19
Atxn1P54254 Gm44856-201ENSMUST00000206639 304 ntBASIC7.59□□□□□ -1.19
Atxn1P54254 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC7.59□□□□□ -1.19
Atxn1P54254 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC7.59□□□□□ -1.19
Atxn1P54254 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC7.59□□□□□ -1.19
Atxn1P54254 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC7.59□□□□□ -1.19
Atxn1P54254 AC151982.1-201ENSMUST00000223546 464 ntBASIC7.59□□□□□ -1.19
Atxn1P54254 AC238940.2-201ENSMUST00000224202 330 ntBASIC7.59□□□□□ -1.19
Atxn1P54254 AC125087.1-201ENSMUST00000227552 514 ntBASIC7.59□□□□□ -1.19
Atxn1P54254 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
Atxn1P54254 Ugt2a3-201ENSMUST00000031195 2117 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Atxn1P54254 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC7.59□□□□□ -1.19
Atxn1P54254 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
Atxn1P54254 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Atxn1P54254 Gm26813-201ENSMUST00000180778 3587 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Atxn1P54254 Unc45b-202ENSMUST00000108160 4152 ntAPPRIS ALT1 TSL 5 BASIC7.59□□□□□ -1.19
Atxn1P54254 Anxa9-201ENSMUST00000015846 1851 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Atxn1P54254 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC7.59□□□□□ -1.19
Atxn1P54254 CT571245.1-201ENSMUST00000218642 3465 ntBASIC7.59□□□□□ -1.19
Atxn1P54254 Rab7b-202ENSMUST00000064679 4498 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Atxn1P54254 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC7.59□□□□□ -1.19
Atxn1P54254 Ankfn1-203ENSMUST00000169201 2232 ntTSL 2 BASIC7.59□□□□□ -1.19
Atxn1P54254 Pglyrp4-203ENSMUST00000169698 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Atxn1P54254 Kbtbd4-201ENSMUST00000090682 2437 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms