Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm45319-201ENSMUST00000210220 318 ntBASIC7.98□□□□□ -1.13
Shmt1P50431 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC7.98□□□□□ -1.13
Shmt1P50431 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC7.98□□□□□ -1.13
Shmt1P50431 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC7.98□□□□□ -1.13
Shmt1P50431 Nqo2-204ENSMUST00000222740 995 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Shmt1P50431 AC140267.1-201ENSMUST00000226485 213 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Shmt1P50431 AC125087.1-201ENSMUST00000227552 514 ntBASIC7.98□□□□□ -1.13
Shmt1P50431 AC122937.2-201ENSMUST00000228258 1051 ntBASIC7.98□□□□□ -1.13
Shmt1P50431 Gm22005-201ENSMUST00000082795 141 ntBASIC7.98□□□□□ -1.13
Shmt1P50431 Gm24613-201ENSMUST00000083266 130 ntBASIC7.98□□□□□ -1.13
Shmt1P50431 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Shmt1P50431 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Shmt1P50431 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC7.98□□□□□ -1.13
Shmt1P50431 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Shmt1P50431 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC7.98□□□□□ -1.13
Shmt1P50431 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Shmt1P50431 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Shmt1P50431 Ighd-202ENSMUST00000194162 1806 ntAPPRIS P5 BASIC7.98□□□□□ -1.13
Shmt1P50431 Tgm3-201ENSMUST00000110299 4135 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Shmt1P50431 Gm29113-201ENSMUST00000185991 3432 ntBASIC7.98□□□□□ -1.13
Shmt1P50431 Mpdz-203ENSMUST00000107262 7518 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Shmt1P50431 Ccdc150-201ENSMUST00000027128 3807 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Shmt1P50431 Gm43519-201ENSMUST00000197239 1872 ntBASIC7.98□□□□□ -1.13
Shmt1P50431 Plxna2-201ENSMUST00000027952 11040 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Shmt1P50431 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Shmt1P50431 Ift122-203ENSMUST00000112925 4122 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Shmt1P50431 Olfr381-204ENSMUST00000215358 2658 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Shmt1P50431 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Shmt1P50431 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Shmt1P50431 Olfr1425-202ENSMUST00000214918 2178 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Shmt1P50431 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC7.97□□□□□ -1.13
Shmt1P50431 AI427809-203ENSMUST00000123127 2033 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Shmt1P50431 Gm25916-201ENSMUST00000104263 131 ntBASIC7.97□□□□□ -1.13
Shmt1P50431 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Shmt1P50431 Gm15481-201ENSMUST00000120264 539 ntBASIC7.97□□□□□ -1.13
Shmt1P50431 Gm12372-201ENSMUST00000121654 768 ntBASIC7.97□□□□□ -1.13
Shmt1P50431 Gm22025-201ENSMUST00000122734 302 ntBASIC7.97□□□□□ -1.13
Shmt1P50431 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC7.97□□□□□ -1.13
Shmt1P50431 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC7.97□□□□□ -1.13
Shmt1P50431 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Shmt1P50431 Gm38254-201ENSMUST00000192276 1009 ntBASIC7.97□□□□□ -1.13
Shmt1P50431 Gm37336-201ENSMUST00000192794 760 ntTSL 2 BASIC7.97□□□□□ -1.13
Shmt1P50431 Gm37871-201ENSMUST00000194973 688 ntBASIC7.97□□□□□ -1.13
Shmt1P50431 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC7.97□□□□□ -1.13
Shmt1P50431 Gm43664-201ENSMUST00000196038 734 ntBASIC7.97□□□□□ -1.13
Shmt1P50431 Gm44356-201ENSMUST00000196731 111 ntBASIC7.97□□□□□ -1.13
Shmt1P50431 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Shmt1P50431 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC7.97□□□□□ -1.13
Shmt1P50431 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Shmt1P50431 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC7.97□□□□□ -1.13
Shmt1P50431 Olfr472-202ENSMUST00000210420 1083 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Shmt1P50431 Gm18377-201ENSMUST00000215141 607 ntBASIC7.97□□□□□ -1.13
Shmt1P50431 Gm19056-201ENSMUST00000218220 797 ntBASIC7.97□□□□□ -1.13
Shmt1P50431 AC154487.1-201ENSMUST00000224649 226 ntBASIC7.97□□□□□ -1.13
Shmt1P50431 Olfr1494-201ENSMUST00000051768 948 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Shmt1P50431 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Shmt1P50431 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Shmt1P50431 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Shmt1P50431 Cdon-201ENSMUST00000042842 7213 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Shmt1P50431 Sp1-204ENSMUST00000165924 4081 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Shmt1P50431 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Shmt1P50431 Gm12661-201ENSMUST00000118780 3335 ntBASIC7.97□□□□□ -1.13
Shmt1P50431 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC7.97□□□□□ -1.13
Shmt1P50431 Olfr766-ps1-201ENSMUST00000204515 2909 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Shmt1P50431 Unc45b-202ENSMUST00000108160 4152 ntAPPRIS ALT1 TSL 5 BASIC7.97□□□□□ -1.13
Shmt1P50431 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Shmt1P50431 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Shmt1P50431 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Shmt1P50431 Gm16072-201ENSMUST00000119574 2377 ntBASIC7.97□□□□□ -1.13
Shmt1P50431 Acad11-201ENSMUST00000047799 3444 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Shmt1P50431 Olfr1189-202ENSMUST00000213679 1983 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Shmt1P50431 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Shmt1P50431 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC7.97□□□□□ -1.13
Shmt1P50431 Slc17a6-201ENSMUST00000032710 4137 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Shmt1P50431 Peak1-201ENSMUST00000061552 6996 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.13
Shmt1P50431 Gm18957-201ENSMUST00000197623 1813 ntBASIC7.96□□□□□ -1.13
Shmt1P50431 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
Shmt1P50431 Gm43254-201ENSMUST00000199187 2491 ntBASIC7.96□□□□□ -1.13
Shmt1P50431 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Shmt1P50431 AC107757.2-201ENSMUST00000226370 1466 ntBASIC7.96□□□□□ -1.13
Shmt1P50431 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Shmt1P50431 Gm28852-201ENSMUST00000186666 2160 ntTSL 5 BASIC7.96□□□□□ -1.14
Shmt1P50431 Gm28880-201ENSMUST00000190161 2160 ntTSL 5 BASIC7.96□□□□□ -1.14
Shmt1P50431 Rad51b-203ENSMUST00000218039 2187 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
Shmt1P50431 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
Shmt1P50431 Vezt-201ENSMUST00000047711 4479 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
Shmt1P50431 Gm45182-201ENSMUST00000207579 2404 ntBASIC7.96□□□□□ -1.14
Shmt1P50431 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Shmt1P50431 Gm25276-201ENSMUST00000104300 124 ntBASIC7.96□□□□□ -1.14
Shmt1P50431 Gm14248-201ENSMUST00000117790 544 ntBASIC7.96□□□□□ -1.14
Shmt1P50431 Gm6491-201ENSMUST00000118273 990 ntBASIC7.96□□□□□ -1.14
Shmt1P50431 Gm13463-201ENSMUST00000119020 233 ntBASIC7.96□□□□□ -1.14
Shmt1P50431 Gm15763-201ENSMUST00000120136 403 ntBASIC7.96□□□□□ -1.14
Shmt1P50431 Gm25109-201ENSMUST00000122474 114 ntBASIC7.96□□□□□ -1.14
Shmt1P50431 Gm15286-201ENSMUST00000150623 743 ntTSL 3 BASIC7.96□□□□□ -1.14
Shmt1P50431 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC7.96□□□□□ -1.14
Shmt1P50431 Cd48-201ENSMUST00000015499 922 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Shmt1P50431 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Shmt1P50431 Esd-ps-201ENSMUST00000170684 847 ntBASIC7.96□□□□□ -1.14
Shmt1P50431 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC7.96□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms