Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VhlP40338 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
VhlP40338 Gm34294-201ENSMUST00000191912 4263 ntBASIC6.1□□□□□ -1.43
VhlP40338 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
VhlP40338 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VhlP40338 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
VhlP40338 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
VhlP40338 Gm42678-201ENSMUST00000197163 2221 ntBASIC6.1□□□□□ -1.43
VhlP40338 Gm44101-201ENSMUST00000203951 2221 ntBASIC6.1□□□□□ -1.43
VhlP40338 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC6.1□□□□□ -1.43
VhlP40338 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VhlP40338 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VhlP40338 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC6.1□□□□□ -1.43
VhlP40338 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VhlP40338 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC6.1□□□□□ -1.43
VhlP40338 Gm21781-201ENSMUST00000178920 4838 ntBASIC6.1□□□□□ -1.43
VhlP40338 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VhlP40338 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
VhlP40338 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
VhlP40338 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC6.1□□□□□ -1.43
VhlP40338 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
VhlP40338 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VhlP40338 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
VhlP40338 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
VhlP40338 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
VhlP40338 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
VhlP40338 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
VhlP40338 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
VhlP40338 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VhlP40338 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
VhlP40338 A230001M10Rik-202ENSMUST00000196720 1307 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
VhlP40338 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
VhlP40338 Olfr131-204ENSMUST00000216523 1714 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
VhlP40338 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC6.09□□□□□ -1.43
VhlP40338 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
VhlP40338 Rgs8-204ENSMUST00000111814 678 ntTSL 3 BASIC6.09□□□□□ -1.43
VhlP40338 Gm11997-201ENSMUST00000118697 313 ntBASIC6.09□□□□□ -1.43
VhlP40338 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VhlP40338 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
VhlP40338 Gm24063-201ENSMUST00000157491 105 ntBASIC6.09□□□□□ -1.43
VhlP40338 Gm26436-201ENSMUST00000180325 132 ntBASIC6.09□□□□□ -1.43
VhlP40338 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
VhlP40338 Gm29561-201ENSMUST00000187838 631 ntTSL 3 BASIC6.09□□□□□ -1.43
VhlP40338 1700124L16Rik-203ENSMUST00000190077 1110 ntBASIC6.09□□□□□ -1.43
VhlP40338 Gm21577-201ENSMUST00000190823 697 ntBASIC6.09□□□□□ -1.43
VhlP40338 Gm37678-201ENSMUST00000192908 1146 ntBASIC6.09□□□□□ -1.43
VhlP40338 Gm37929-201ENSMUST00000195116 493 ntBASIC6.09□□□□□ -1.43
VhlP40338 Gm6394-201ENSMUST00000197077 477 ntBASIC6.09□□□□□ -1.43
VhlP40338 Gm43023-201ENSMUST00000197583 2106 ntBASIC6.09□□□□□ -1.43
VhlP40338 Gm43008-201ENSMUST00000202346 286 ntBASIC6.09□□□□□ -1.43
VhlP40338 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VhlP40338 Gm26911-203ENSMUST00000204781 369 ntTSL 3 BASIC6.09□□□□□ -1.43
VhlP40338 Ceacam-ps1-201ENSMUST00000205380 794 ntTSL 2 BASIC6.09□□□□□ -1.43
VhlP40338 Gm45672-201ENSMUST00000209700 768 ntTSL 3 BASIC6.09□□□□□ -1.43
VhlP40338 Gm32486-201ENSMUST00000209810 3816 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
VhlP40338 Gm5086-203ENSMUST00000210897 1136 ntTSL 5 BASIC6.09□□□□□ -1.43
VhlP40338 AC122539.2-201ENSMUST00000220207 404 ntBASIC6.09□□□□□ -1.43
VhlP40338 AC134913.1-201ENSMUST00000224563 504 ntBASIC6.09□□□□□ -1.43
VhlP40338 AC123867.1-201ENSMUST00000224990 816 ntBASIC6.09□□□□□ -1.43
VhlP40338 AC207128.1-201ENSMUST00000225928 799 ntBASIC6.09□□□□□ -1.43
VhlP40338 Gm5590-201ENSMUST00000059110 345 ntBASIC6.09□□□□□ -1.43
VhlP40338 Gm8882-201ENSMUST00000080849 1240 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VhlP40338 Mir484-201ENSMUST00000093566 67 ntBASIC6.09□□□□□ -1.43
VhlP40338 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
VhlP40338 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VhlP40338 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VhlP40338 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VhlP40338 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
VhlP40338 Gm6640-201ENSMUST00000120629 1587 ntBASIC6.09□□□□□ -1.43
VhlP40338 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VhlP40338 C87499-201ENSMUST00000053304 1901 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.44
VhlP40338 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
VhlP40338 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
VhlP40338 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
VhlP40338 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.44
VhlP40338 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC6.09□□□□□ -1.44
VhlP40338 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
VhlP40338 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
VhlP40338 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC6.09□□□□□ -1.44
VhlP40338 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC6.09□□□□□ -1.44
VhlP40338 Gm44436-201ENSMUST00000204200 1494 ntBASIC6.09□□□□□ -1.44
VhlP40338 Gm44797-201ENSMUST00000208780 1837 ntBASIC6.09□□□□□ -1.44
VhlP40338 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VhlP40338 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VhlP40338 Gm37968-201ENSMUST00000195131 3201 ntBASIC6.08□□□□□ -1.44
VhlP40338 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VhlP40338 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VhlP40338 4932414J04Rik-201ENSMUST00000152483 3059 ntTSL 2 BASIC6.08□□□□□ -1.44
VhlP40338 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VhlP40338 Olfr1491-202ENSMUST00000214007 1675 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
VhlP40338 Olfr1491-203ENSMUST00000215493 1675 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
VhlP40338 Olfr1491-205ENSMUST00000216377 1678 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
VhlP40338 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
VhlP40338 Gm44185-201ENSMUST00000204539 3307 ntBASIC6.08□□□□□ -1.44
VhlP40338 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VhlP40338 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
VhlP40338 Pilrb1-201ENSMUST00000110978 1020 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
VhlP40338 Cdk2ap1-203ENSMUST00000111473 715 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VhlP40338 Gm5915-201ENSMUST00000116136 454 ntBASIC6.08□□□□□ -1.44
VhlP40338 Gm24195-201ENSMUST00000116804 137 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms