Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm43128-201ENSMUST00000202212 1621 ntBASIC9.74□□□□□ -0.85
Col18a1P39061 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Col18a1P39061 Uba1-202ENSMUST00000089217 4044 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Col18a1P39061 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC9.74□□□□□ -0.85
Col18a1P39061 Snhg7os-202ENSMUST00000131841 3947 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Col18a1P39061 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Col18a1P39061 Utp14b-202ENSMUST00000151622 3685 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Col18a1P39061 Timeless-205ENSMUST00000105244 4341 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Col18a1P39061 A830010M20Rik-201ENSMUST00000060553 2439 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Col18a1P39061 Arhgap6-205ENSMUST00000112131 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Col18a1P39061 Otoa-201ENSMUST00000047025 3773 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Col18a1P39061 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Col18a1P39061 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Col18a1P39061 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Col18a1P39061 Gm14865-201ENSMUST00000117523 494 ntBASIC9.73□□□□□ -0.85
Col18a1P39061 Gm4992-201ENSMUST00000120256 768 ntBASIC9.73□□□□□ -0.85
Col18a1P39061 Gm14776-201ENSMUST00000121029 887 ntBASIC9.73□□□□□ -0.85
Col18a1P39061 Gm6451-201ENSMUST00000121488 717 ntBASIC9.73□□□□□ -0.85
Col18a1P39061 Sms-ps-201ENSMUST00000121773 1101 ntBASIC9.73□□□□□ -0.85
Col18a1P39061 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC9.73□□□□□ -0.85
Col18a1P39061 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC9.73□□□□□ -0.85
Col18a1P39061 Gm22701-201ENSMUST00000175371 291 ntBASIC9.73□□□□□ -0.85
Col18a1P39061 Gm37073-201ENSMUST00000192469 1222 ntBASIC9.73□□□□□ -0.85
Col18a1P39061 Gm38097-201ENSMUST00000192936 439 ntBASIC9.73□□□□□ -0.85
Col18a1P39061 Gm36939-201ENSMUST00000194889 439 ntBASIC9.73□□□□□ -0.85
Col18a1P39061 Gm37637-201ENSMUST00000195540 1256 ntBASIC9.73□□□□□ -0.85
Col18a1P39061 Gm43233-201ENSMUST00000200491 616 ntBASIC9.73□□□□□ -0.85
Col18a1P39061 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC9.73□□□□□ -0.85
Col18a1P39061 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Col18a1P39061 Nqo2-204ENSMUST00000222740 995 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Col18a1P39061 Dennd6a-204ENSMUST00000224248 2775 ntBASIC9.73□□□□□ -0.85
Col18a1P39061 Kcnma1-224ENSMUST00000224077 3537 ntAPPRIS ALT2 BASIC9.73□□□□□ -0.85
Col18a1P39061 Rnase6-202ENSMUST00000226194 2452 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Col18a1P39061 Zfp408-202ENSMUST00000111333 3740 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Col18a1P39061 Gm38262-201ENSMUST00000194760 1382 ntBASIC9.73□□□□□ -0.85
Col18a1P39061 Dclre1b-202ENSMUST00000063502 4113 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Col18a1P39061 Sptan1-208ENSMUST00000129241 7585 ntTSL 5 BASIC9.73□□□□□ -0.85
Col18a1P39061 Gm43571-201ENSMUST00000200067 3098 ntBASIC9.73□□□□□ -0.85
Col18a1P39061 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Col18a1P39061 AC124433.1-202ENSMUST00000224762 1535 ntBASIC9.73□□□□□ -0.85
Col18a1P39061 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Col18a1P39061 Rapgef6-203ENSMUST00000102743 8189 ntAPPRIS P3 TSL 5 BASIC9.73□□□□□ -0.85
Col18a1P39061 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Col18a1P39061 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Col18a1P39061 Gulp1-201ENSMUST00000074525 3138 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Col18a1P39061 Cbx3-204ENSMUST00000114446 1719 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Col18a1P39061 Idi2-201ENSMUST00000038598 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Col18a1P39061 Zfp462-201ENSMUST00000030131 4823 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Col18a1P39061 Cenpo-205ENSMUST00000140975 4348 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Col18a1P39061 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Col18a1P39061 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC9.73□□□□□ -0.85
Col18a1P39061 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC9.73□□□□□ -0.85
Col18a1P39061 AC154806.1-203ENSMUST00000227370 1032 ntBASIC9.73□□□□□ -0.85
Col18a1P39061 Gm21731-201ENSMUST00000079524 489 ntBASIC9.73□□□□□ -0.85
Col18a1P39061 Rest-201ENSMUST00000080359 7004 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Col18a1P39061 Il9r-205ENSMUST00000145401 4482 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Col18a1P39061 Olfr1462-202ENSMUST00000208533 3424 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
Col18a1P39061 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Col18a1P39061 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Col18a1P39061 Cc2d2a-201ENSMUST00000048150 5484 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Col18a1P39061 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Col18a1P39061 Lrrc32-201ENSMUST00000165205 3817 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Col18a1P39061 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Col18a1P39061 Gm14035-201ENSMUST00000117596 1475 ntBASIC9.72□□□□□ -0.85
Col18a1P39061 Ms4a6b-205ENSMUST00000163078 2680 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Col18a1P39061 Il1rl1-203ENSMUST00000173514 2661 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Col18a1P39061 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Col18a1P39061 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Col18a1P39061 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Col18a1P39061 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Col18a1P39061 Gm37595-201ENSMUST00000192668 1742 ntBASIC9.72□□□□□ -0.85
Col18a1P39061 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Col18a1P39061 Ammecr1l-201ENSMUST00000115808 4769 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Col18a1P39061 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Col18a1P39061 Prkd3-202ENSMUST00000118768 2847 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Col18a1P39061 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Col18a1P39061 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Col18a1P39061 Gm22709-201ENSMUST00000116893 111 ntBASIC9.72□□□□□ -0.85
Col18a1P39061 Gm15750-201ENSMUST00000120970 616 ntBASIC9.72□□□□□ -0.85
Col18a1P39061 Gm10913-201ENSMUST00000133732 463 ntBASIC9.72□□□□□ -0.85
Col18a1P39061 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Col18a1P39061 Gm22885-201ENSMUST00000157410 107 ntBASIC9.72□□□□□ -0.85
Col18a1P39061 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Col18a1P39061 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC9.72□□□□□ -0.85
Col18a1P39061 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC9.72□□□□□ -0.85
Col18a1P39061 Gm38022-201ENSMUST00000191762 403 ntBASIC9.72□□□□□ -0.85
Col18a1P39061 Gm6077-201ENSMUST00000196008 499 ntBASIC9.72□□□□□ -0.85
Col18a1P39061 Gm44360-201ENSMUST00000200081 82 ntBASIC9.72□□□□□ -0.85
Col18a1P39061 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC9.72□□□□□ -0.85
Col18a1P39061 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC9.72□□□□□ -0.85
Col18a1P39061 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC9.72□□□□□ -0.85
Col18a1P39061 AC154640.1-202ENSMUST00000227828 496 ntBASIC9.72□□□□□ -0.85
Col18a1P39061 Gm22126-201ENSMUST00000083244 142 ntBASIC9.72□□□□□ -0.85
Col18a1P39061 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Col18a1P39061 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Col18a1P39061 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC9.72□□□□□ -0.85
Col18a1P39061 Ap3m2-204ENSMUST00000210656 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Col18a1P39061 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Col18a1P39061 Gm2654-201ENSMUST00000221381 1592 ntBASIC9.72□□□□□ -0.85
Col18a1P39061 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms