Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Usp4P35123 AC154527.3-201ENSMUST00000225519 989 ntBASIC8.02□□□□□ -1.13
Usp4P35123 Capsl-201ENSMUST00000042360 949 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Usp4P35123 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Usp4P35123 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Usp4P35123 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Usp4P35123 Gm45221-201ENSMUST00000207822 2272 ntBASIC8.02□□□□□ -1.13
Usp4P35123 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
Usp4P35123 Vmn2r-ps95-201ENSMUST00000222423 2316 ntBASIC8.02□□□□□ -1.13
Usp4P35123 AC153729.1-201ENSMUST00000214055 2562 ntBASIC8.02□□□□□ -1.13
Usp4P35123 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Usp4P35123 Gm45477-201ENSMUST00000200213 5498 ntBASIC8.02□□□□□ -1.13
Usp4P35123 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Usp4P35123 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC8.01□□□□□ -1.13
Usp4P35123 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Usp4P35123 Mroh2b-201ENSMUST00000045736 4829 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Usp4P35123 Gprin3-201ENSMUST00000051065 8339 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Usp4P35123 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Usp4P35123 Gm12919-201ENSMUST00000119855 1594 ntBASIC8.01□□□□□ -1.13
Usp4P35123 0610037L13Rik-212ENSMUST00000135454 2997 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Usp4P35123 Olfr212-202ENSMUST00000218028 2291 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Usp4P35123 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Usp4P35123 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC8.01□□□□□ -1.13
Usp4P35123 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Usp4P35123 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Usp4P35123 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC8.01□□□□□ -1.13
Usp4P35123 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC8.01□□□□□ -1.13
Usp4P35123 Olfr1361-202ENSMUST00000214321 2792 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Usp4P35123 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC8.01□□□□□ -1.13
Usp4P35123 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Usp4P35123 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC8.01□□□□□ -1.13
Usp4P35123 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
Usp4P35123 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Usp4P35123 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Usp4P35123 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Usp4P35123 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Usp4P35123 Gm23529-201ENSMUST00000104562 132 ntBASIC8.01□□□□□ -1.13
Usp4P35123 Gm13626-201ENSMUST00000119435 402 ntBASIC8.01□□□□□ -1.13
Usp4P35123 Olfr268-ps1-201ENSMUST00000121395 945 ntBASIC8.01□□□□□ -1.13
Usp4P35123 Gm13206-201ENSMUST00000129579 1090 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Usp4P35123 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC8.01□□□□□ -1.13
Usp4P35123 Kbtbd8os-201ENSMUST00000135145 427 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Usp4P35123 Gm15941-204ENSMUST00000135401 726 ntTSL 3 BASIC8.01□□□□□ -1.13
Usp4P35123 Crem-218ENSMUST00000139537 807 ntTSL 2 BASIC8.01□□□□□ -1.13
Usp4P35123 Gm25277-201ENSMUST00000157266 324 ntBASIC8.01□□□□□ -1.13
Usp4P35123 Gm17122-201ENSMUST00000166047 372 ntTSL 5 BASIC8.01□□□□□ -1.13
Usp4P35123 Mir1231-201ENSMUST00000175639 81 ntBASIC8.01□□□□□ -1.13
Usp4P35123 1500004A13Rik-201ENSMUST00000183374 891 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Usp4P35123 Ly6c2-204ENSMUST00000191451 538 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
Usp4P35123 Gm18692-201ENSMUST00000193047 511 ntBASIC8.01□□□□□ -1.13
Usp4P35123 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC8.01□□□□□ -1.13
Usp4P35123 Cd69-203ENSMUST00000204411 560 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Usp4P35123 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC8.01□□□□□ -1.13
Usp4P35123 Gm45408-201ENSMUST00000211080 390 ntTSL 5 BASIC8.01□□□□□ -1.13
Usp4P35123 4930555F03Rik-205ENSMUST00000212179 1257 ntTSL 5 BASIC8.01□□□□□ -1.13
Usp4P35123 AC164294.1-201ENSMUST00000224682 688 ntBASIC8.01□□□□□ -1.13
Usp4P35123 CT009550.3-201ENSMUST00000228542 455 ntBASIC8.01□□□□□ -1.13
Usp4P35123 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Usp4P35123 Olfr1449-201ENSMUST00000056005 948 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Usp4P35123 Cytl1-201ENSMUST00000073554 974 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Usp4P35123 B230118H07Rik-201ENSMUST00000090513 969 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Usp4P35123 Gm10283-201ENSMUST00000093494 354 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Usp4P35123 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Usp4P35123 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Usp4P35123 Slc22a26-201ENSMUST00000065634 2007 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Usp4P35123 Mybbp1a-201ENSMUST00000045633 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Usp4P35123 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Usp4P35123 Gm15624-201ENSMUST00000145420 1405 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Usp4P35123 Gm43409-201ENSMUST00000195921 2162 ntTSL 5 BASIC8.01□□□□□ -1.13
Usp4P35123 Peak1-201ENSMUST00000061552 6996 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Usp4P35123 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Usp4P35123 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC8.01□□□□□ -1.13
Usp4P35123 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Usp4P35123 2010310C07Rik-201ENSMUST00000187172 2226 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Usp4P35123 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Usp4P35123 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC8□□□□□ -1.13
Usp4P35123 CT025619.3-201ENSMUST00000216299 3267 ntBASIC8□□□□□ -1.13
Usp4P35123 Gm6819-201ENSMUST00000185325 1891 ntBASIC8□□□□□ -1.13
Usp4P35123 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC8□□□□□ -1.13
Usp4P35123 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC8□□□□□ -1.13
Usp4P35123 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
Usp4P35123 AC124414.1-201ENSMUST00000218033 2946 ntBASIC8□□□□□ -1.13
Usp4P35123 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Usp4P35123 Sept14-201ENSMUST00000042266 1381 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Usp4P35123 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Usp4P35123 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC8□□□□□ -1.13
Usp4P35123 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
Usp4P35123 Igkv8-30-201ENSMUST00000103378 368 ntAPPRIS P1 BASIC8□□□□□ -1.13
Usp4P35123 Gm15161-201ENSMUST00000117340 387 ntBASIC8□□□□□ -1.13
Usp4P35123 Gm12844-201ENSMUST00000119463 582 ntBASIC8□□□□□ -1.13
Usp4P35123 Gm25845-201ENSMUST00000122588 310 ntBASIC8□□□□□ -1.13
Usp4P35123 Gm26197-201ENSMUST00000175033 115 ntBASIC8□□□□□ -1.13
Usp4P35123 Gm8919-201ENSMUST00000182028 1014 ntBASIC8□□□□□ -1.13
Usp4P35123 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC8□□□□□ -1.13
Usp4P35123 Gm29588-201ENSMUST00000185738 298 ntBASIC8□□□□□ -1.13
Usp4P35123 Gm28918-201ENSMUST00000188822 699 ntBASIC8□□□□□ -1.13
Usp4P35123 1700036G14Rik-201ENSMUST00000189046 542 ntTSL 1 (best) BASIC8□□□□□ -1.13
Usp4P35123 1700003L19Rik-201ENSMUST00000190074 746 ntTSL 1 (best) BASIC8□□□□□ -1.13
Usp4P35123 Gm3489-201ENSMUST00000190083 528 ntBASIC8□□□□□ -1.13
Usp4P35123 Gm22149-202ENSMUST00000196259 137 ntBASIC8□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms