Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Bbx-208ENSMUST00000138166 8743 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
NpcdF8VQB8 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
NpcdF8VQB8 Erg-202ENSMUST00000113846 3249 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
NpcdF8VQB8 Olfr1510-202ENSMUST00000215928 1934 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
NpcdF8VQB8 Ndp-201ENSMUST00000040134 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
NpcdF8VQB8 Pcdh11x-201ENSMUST00000050239 4442 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
NpcdF8VQB8 Prg4-202ENSMUST00000111901 3495 ntTSL 5 BASIC9.4□□□□□ -0.9
NpcdF8VQB8 Eif4e2-207ENSMUST00000113235 3473 ntTSL 5 BASIC9.4□□□□□ -0.9
NpcdF8VQB8 Gm12183-201ENSMUST00000120566 1848 ntBASIC9.4□□□□□ -0.9
NpcdF8VQB8 Mctp2-201ENSMUST00000079323 5802 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
NpcdF8VQB8 Gm28250-201ENSMUST00000187025 2168 ntTSL 5 BASIC9.4□□□□□ -0.9
NpcdF8VQB8 Gm37157-201ENSMUST00000192120 2168 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
NpcdF8VQB8 Gm37112-201ENSMUST00000194389 2168 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
NpcdF8VQB8 Gm16465-201ENSMUST00000118585 1758 ntBASIC9.4□□□□□ -0.9
NpcdF8VQB8 Gm17229-202ENSMUST00000166792 1753 ntBASIC9.4□□□□□ -0.9
NpcdF8VQB8 B930018H19Rik-201ENSMUST00000211381 2121 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
NpcdF8VQB8 Card6-201ENSMUST00000118365 5995 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
NpcdF8VQB8 Gm44509-201ENSMUST00000205400 1324 ntBASIC9.4□□□□□ -0.9
NpcdF8VQB8 Olfr1432-202ENSMUST00000207710 2068 ntAPPRIS P5 TSL 5 BASIC9.4□□□□□ -0.9
NpcdF8VQB8 Olfr140-203ENSMUST00000216475 3574 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
NpcdF8VQB8 Plec-205ENSMUST00000073418 15455 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
NpcdF8VQB8 Mycbp2-201ENSMUST00000159855 15233 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
NpcdF8VQB8 Pot1b-201ENSMUST00000086876 3499 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
NpcdF8VQB8 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC9.4□□□□□ -0.9
NpcdF8VQB8 Rpl35a-202ENSMUST00000115075 518 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
NpcdF8VQB8 Gm14279-201ENSMUST00000117142 332 ntBASIC9.4□□□□□ -0.9
NpcdF8VQB8 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC9.4□□□□□ -0.9
NpcdF8VQB8 Gm10243-201ENSMUST00000117571 333 ntBASIC9.4□□□□□ -0.9
NpcdF8VQB8 Gm12851-201ENSMUST00000117920 421 ntBASIC9.4□□□□□ -0.9
NpcdF8VQB8 Gm11810-201ENSMUST00000118311 333 ntBASIC9.4□□□□□ -0.9
NpcdF8VQB8 Gm13240-201ENSMUST00000120042 565 ntBASIC9.4□□□□□ -0.9
NpcdF8VQB8 Olfr1374-ps1-201ENSMUST00000120114 936 ntBASIC9.4□□□□□ -0.9
NpcdF8VQB8 Gm12870-201ENSMUST00000121383 1016 ntBASIC9.4□□□□□ -0.9
NpcdF8VQB8 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC9.4□□□□□ -0.9
NpcdF8VQB8 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC9.4□□□□□ -0.9
NpcdF8VQB8 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC9.4□□□□□ -0.9
NpcdF8VQB8 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC9.4□□□□□ -0.9
NpcdF8VQB8 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC9.4□□□□□ -0.9
NpcdF8VQB8 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC9.4□□□□□ -0.9
NpcdF8VQB8 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC9.4□□□□□ -0.9
NpcdF8VQB8 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
NpcdF8VQB8 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
NpcdF8VQB8 Gm13147-202ENSMUST00000177526 1173 ntBASIC9.4□□□□□ -0.9
NpcdF8VQB8 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
NpcdF8VQB8 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
NpcdF8VQB8 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC9.4□□□□□ -0.9
NpcdF8VQB8 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC9.4□□□□□ -0.9
NpcdF8VQB8 Gm27005-201ENSMUST00000182783 921 ntBASIC9.4□□□□□ -0.9
NpcdF8VQB8 Mir8120-201ENSMUST00000185035 139 ntBASIC9.4□□□□□ -0.9
NpcdF8VQB8 Gm6472-202ENSMUST00000187973 582 ntBASIC9.4□□□□□ -0.9
NpcdF8VQB8 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC9.4□□□□□ -0.9
NpcdF8VQB8 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC9.4□□□□□ -0.9
NpcdF8VQB8 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
NpcdF8VQB8 Gm37599-201ENSMUST00000193067 489 ntBASIC9.4□□□□□ -0.9
NpcdF8VQB8 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC9.4□□□□□ -0.9
NpcdF8VQB8 Gm8182-201ENSMUST00000197863 769 ntBASIC9.4□□□□□ -0.9
NpcdF8VQB8 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
NpcdF8VQB8 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
NpcdF8VQB8 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC9.4□□□□□ -0.9
NpcdF8VQB8 Gm4247-201ENSMUST00000211441 1042 ntBASIC9.4□□□□□ -0.9
NpcdF8VQB8 Olfr503-202ENSMUST00000211693 966 ntAPPRIS ALT1 BASIC9.4□□□□□ -0.9
NpcdF8VQB8 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC9.4□□□□□ -0.9
NpcdF8VQB8 AC153561.1-201ENSMUST00000215943 469 ntBASIC9.4□□□□□ -0.9
NpcdF8VQB8 Gm19073-201ENSMUST00000219978 555 ntBASIC9.4□□□□□ -0.9
NpcdF8VQB8 AC154461.4-201ENSMUST00000224878 468 ntBASIC9.4□□□□□ -0.9
NpcdF8VQB8 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
NpcdF8VQB8 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
NpcdF8VQB8 Olfr503-201ENSMUST00000078162 972 ntAPPRIS P2 BASIC9.4□□□□□ -0.9
NpcdF8VQB8 Gm10247-201ENSMUST00000090395 333 ntBASIC9.4□□□□□ -0.9
NpcdF8VQB8 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
NpcdF8VQB8 Dnajc6-201ENSMUST00000038207 5258 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
NpcdF8VQB8 Adgrb3-205ENSMUST00000135518 5432 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
NpcdF8VQB8 Gm44802-201ENSMUST00000208026 1916 ntBASIC9.4□□□□□ -0.9
NpcdF8VQB8 Runx1t1-202ENSMUST00000098256 3317 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
NpcdF8VQB8 Khdc1b-201ENSMUST00000147615 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
NpcdF8VQB8 Trpd52l3-201ENSMUST00000025727 2231 ntAPPRIS P1 BASIC9.4□□□□□ -0.91
NpcdF8VQB8 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC9.4□□□□□ -0.91
NpcdF8VQB8 Gm44423-201ENSMUST00000203746 3158 ntBASIC9.4□□□□□ -0.91
NpcdF8VQB8 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC9.4□□□□□ -0.91
NpcdF8VQB8 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
NpcdF8VQB8 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
NpcdF8VQB8 Mmp19-201ENSMUST00000026411 3402 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
NpcdF8VQB8 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC9.4□□□□□ -0.91
NpcdF8VQB8 Acvr1-204ENSMUST00000112601 3050 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
NpcdF8VQB8 Gm44883-201ENSMUST00000206063 3258 ntBASIC9.39□□□□□ -0.91
NpcdF8VQB8 Pet2-201ENSMUST00000113959 4183 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
NpcdF8VQB8 Pet2-202ENSMUST00000113960 4182 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
NpcdF8VQB8 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
NpcdF8VQB8 Nrf1-204ENSMUST00000115199 2296 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
NpcdF8VQB8 Chek2-201ENSMUST00000066160 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
NpcdF8VQB8 Pcdh15-228ENSMUST00000152819 2867 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
NpcdF8VQB8 Cdhr1-201ENSMUST00000022337 4332 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
NpcdF8VQB8 Nutm1-201ENSMUST00000043970 3731 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
NpcdF8VQB8 Snhg14-206ENSMUST00000187666 2517 ntTSL 5 BASIC9.39□□□□□ -0.91
NpcdF8VQB8 Ankfn1-203ENSMUST00000169201 2232 ntTSL 2 BASIC9.39□□□□□ -0.91
NpcdF8VQB8 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
NpcdF8VQB8 Ablim3-202ENSMUST00000166783 4213 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
NpcdF8VQB8 Gm10248-201ENSMUST00000090409 2731 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
NpcdF8VQB8 Erc1-201ENSMUST00000032279 8356 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
NpcdF8VQB8 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms