Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC8.25□□□□□ -1.09
Scn3aA2ASI5 Nlrp12-201ENSMUST00000108653 6928 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Scn3aA2ASI5 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Scn3aA2ASI5 Gm45807-201ENSMUST00000209142 2874 ntBASIC8.25□□□□□ -1.09
Scn3aA2ASI5 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Scn3aA2ASI5 Gm14035-201ENSMUST00000117596 1475 ntBASIC8.24□□□□□ -1.09
Scn3aA2ASI5 Katnb1-201ENSMUST00000034239 3777 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Scn3aA2ASI5 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Scn3aA2ASI5 Cd300lg-203ENSMUST00000107164 2737 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Scn3aA2ASI5 Epb41l2-202ENSMUST00000092645 4280 ntAPPRIS P2 TSL 5 BASIC8.24□□□□□ -1.09
Scn3aA2ASI5 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Scn3aA2ASI5 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Scn3aA2ASI5 Gm6327-201ENSMUST00000171185 1335 ntBASIC8.24□□□□□ -1.09
Scn3aA2ASI5 Gm26645-201ENSMUST00000181076 1316 ntBASIC8.24□□□□□ -1.09
Scn3aA2ASI5 Mpdz-203ENSMUST00000107262 7518 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Scn3aA2ASI5 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Scn3aA2ASI5 Sulf1-205ENSMUST00000186051 4563 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Scn3aA2ASI5 Gm22533-201ENSMUST00000158821 274 ntBASIC8.24□□□□□ -1.09
Scn3aA2ASI5 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Scn3aA2ASI5 Gm7651-201ENSMUST00000173398 901 ntBASIC8.24□□□□□ -1.09
Scn3aA2ASI5 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC8.24□□□□□ -1.09
Scn3aA2ASI5 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC8.24□□□□□ -1.09
Scn3aA2ASI5 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC8.24□□□□□ -1.09
Scn3aA2ASI5 AC187103.4-201ENSMUST00000225399 300 ntBASIC8.24□□□□□ -1.09
Scn3aA2ASI5 Gm5528-201ENSMUST00000076314 480 ntBASIC8.24□□□□□ -1.09
Scn3aA2ASI5 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Scn3aA2ASI5 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Scn3aA2ASI5 Xlr5a-203ENSMUST00000114521 1474 ntTSL 5 BASIC8.24□□□□□ -1.09
Scn3aA2ASI5 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Scn3aA2ASI5 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Scn3aA2ASI5 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Scn3aA2ASI5 Rgs19-206ENSMUST00000108778 1427 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Scn3aA2ASI5 Rgs19-212ENSMUST00000165416 1427 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Scn3aA2ASI5 Abca17-201ENSMUST00000039324 5202 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Scn3aA2ASI5 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Scn3aA2ASI5 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Scn3aA2ASI5 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Scn3aA2ASI5 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Scn3aA2ASI5 Dclk1-207ENSMUST00000198412 4282 ntTSL 5 BASIC8.24□□□□□ -1.09
Scn3aA2ASI5 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Scn3aA2ASI5 Gm37633-201ENSMUST00000192858 2700 ntBASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Pik3ca-203ENSMUST00000108243 6689 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Mtfr1-202ENSMUST00000117529 1896 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Gm6743-201ENSMUST00000117345 1066 ntBASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Gm13900-201ENSMUST00000119402 498 ntBASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Gm11343-201ENSMUST00000120579 599 ntBASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Gm11257-201ENSMUST00000121313 315 ntBASIC8.23□□□□□ -1.09
Scn3aA2ASI5 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Gm24157-201ENSMUST00000175265 111 ntBASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Gm27360-201ENSMUST00000183487 80 ntBASIC8.23□□□□□ -1.09
Scn3aA2ASI5 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Gm17833-201ENSMUST00000197629 1065 ntBASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC8.23□□□□□ -1.09
Scn3aA2ASI5 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC8.23□□□□□ -1.09
Scn3aA2ASI5 AC154515.3-201ENSMUST00000225081 1159 ntBASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Gm17841-201ENSMUST00000210711 2425 ntBASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Unc5c-204ENSMUST00000130636 3595 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Saal1-201ENSMUST00000143082 4728 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Nvl-201ENSMUST00000027797 9392 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Pcdh12-201ENSMUST00000025311 3859 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Apobec1-203ENSMUST00000112587 2072 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Mroh2a-202ENSMUST00000113130 7491 ntAPPRIS P2 TSL 5 BASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Ank3-210ENSMUST00000182155 6375 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Crnn-203ENSMUST00000195515 1863 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Wdr72-201ENSMUST00000055879 5196 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Garnl3-202ENSMUST00000102810 3578 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Scn3aA2ASI5 AC187103.1-201ENSMUST00000224641 1475 ntBASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Gm37520-201ENSMUST00000194883 2672 ntBASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Fam198b-201ENSMUST00000029567 6627 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Phf6-201ENSMUST00000078944 4350 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Gm26419-201ENSMUST00000104272 133 ntBASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Gm13196-201ENSMUST00000118297 379 ntBASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Gm10913-201ENSMUST00000133732 463 ntBASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Igkv4-77-201ENSMUST00000199410 352 ntBASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Gm21048-201ENSMUST00000202470 1166 ntBASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Gm18469-201ENSMUST00000208850 439 ntBASIC8.23□□□□□ -1.09
Scn3aA2ASI5 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC8.23□□□□□ -1.09
Scn3aA2ASI5 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Amy1-202ENSMUST00000106540 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Atr-201ENSMUST00000034980 8056 ntTSL 5 BASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Scn3aA2ASI5 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Scn3aA2ASI5 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC8.22□□□□□ -1.09
Scn3aA2ASI5 Abca4-201ENSMUST00000013995 7263 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Scn3aA2ASI5 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
Scn3aA2ASI5 Cfap46-202ENSMUST00000129990 8180 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Scn3aA2ASI5 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 120.2 ms