Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm18313-201ENSMUST00000221036 1784 ntBASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Olfr1284-201ENSMUST00000062407 1774 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Gm21043-201ENSMUST00000199316 1517 ntBASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Gm8257-202ENSMUST00000169583 1749 ntAPPRIS P5 TSL 5 BASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Igkv8-30-201ENSMUST00000103378 368 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Gm12365-201ENSMUST00000117931 568 ntBASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Gm8662-201ENSMUST00000118644 574 ntBASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Gm12219-201ENSMUST00000119198 443 ntBASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Gm13680-201ENSMUST00000119790 793 ntBASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Gm15417-201ENSMUST00000126926 925 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Gm14024-201ENSMUST00000141964 560 ntTSL 2 BASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Gm22119-201ENSMUST00000175594 99 ntBASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Gm29273-201ENSMUST00000188880 262 ntBASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Olfr318-201ENSMUST00000189911 1026 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Gm28341-201ENSMUST00000190883 472 ntBASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Gm36961-201ENSMUST00000191980 132 ntBASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Gm26672-203ENSMUST00000192501 756 ntTSL 3 BASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Gm40304-201ENSMUST00000202154 268 ntTSL 3 BASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Gm44096-201ENSMUST00000203171 504 ntTSL 2 BASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Gm19254-201ENSMUST00000204828 294 ntBASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC7.08□□□□□ -1.28
Trim3Q9R1R2 CT025685.1-201ENSMUST00000213716 150 ntBASIC7.08□□□□□ -1.28
Trim3Q9R1R2 CT572999.1-201ENSMUST00000220315 1260 ntBASIC7.08□□□□□ -1.28
Trim3Q9R1R2 AC152819.1-201ENSMUST00000220435 871 ntTSL 5 BASIC7.08□□□□□ -1.28
Trim3Q9R1R2 AC129537.1-202ENSMUST00000226619 430 ntBASIC7.08□□□□□ -1.28
Trim3Q9R1R2 AC107453.3-201ENSMUST00000228205 639 ntBASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Med21-201ENSMUST00000032429 814 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Oosp1-201ENSMUST00000048214 972 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Zfp120-202ENSMUST00000094538 1245 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Trim3Q9R1R2 C130083A15Rik-201ENSMUST00000205707 1460 ntBASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim3Q9R1R2 C1s1-204ENSMUST00000162443 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Gm37364-201ENSMUST00000192533 3920 ntBASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim3Q9R1R2 AC124421.1-201ENSMUST00000219114 4154 ntBASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Tmem30c-201ENSMUST00000023434 2973 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
Trim3Q9R1R2 AC124675.1-201ENSMUST00000226263 1390 ntBASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Zfp438-201ENSMUST00000063989 3209 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Gm10623-201ENSMUST00000209081 2639 ntBASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Trim3Q9R1R2 BC085271-201ENSMUST00000191852 1487 ntBASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Gm16072-201ENSMUST00000119574 2377 ntBASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Trav9-2-201ENSMUST00000103654 563 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Gm22660-201ENSMUST00000104193 130 ntBASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Gm22022-201ENSMUST00000104355 127 ntBASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Gm24373-201ENSMUST00000104393 132 ntBASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Gm12344-201ENSMUST00000117087 329 ntBASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Gm14016-201ENSMUST00000119095 486 ntBASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Prkag2os1-201ENSMUST00000134633 991 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim3Q9R1R2 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Gm25437-201ENSMUST00000158282 132 ntBASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Gm24738-201ENSMUST00000158856 123 ntBASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Scgb1b28-ps-201ENSMUST00000163647 290 ntBASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Gm4781-201ENSMUST00000167995 781 ntBASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Gm18709-201ENSMUST00000180564 489 ntBASIC7.07□□□□□ -1.28
Trim3Q9R1R2 A530083I20Rik-202ENSMUST00000180877 1022 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Gm26812-201ENSMUST00000181647 328 ntTSL 3 BASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Gm20813-201ENSMUST00000186646 705 ntBASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Gm7200-201ENSMUST00000188426 1163 ntBASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Gm21923-201ENSMUST00000188455 696 ntBASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Gm553-201ENSMUST00000189527 701 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Gm28239-201ENSMUST00000190225 447 ntBASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Gm22149-202ENSMUST00000196259 137 ntBASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Gm43815-201ENSMUST00000197676 990 ntBASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Gm27680-202ENSMUST00000199221 807 ntBASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Gm19172-201ENSMUST00000203170 1246 ntBASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Gm44448-201ENSMUST00000205104 393 ntTSL 5 BASIC7.07□□□□□ -1.28
Trim3Q9R1R2 Gm45900-201ENSMUST00000211879 409 ntBASIC7.07□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms