Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm16053-201ENSMUST00000120511 188 ntBASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Gm14332-201ENSMUST00000121982 899 ntBASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Samd13-201ENSMUST00000124931 905 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Gm11209-201ENSMUST00000130206 431 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Gm13999-201ENSMUST00000141511 969 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Gm6286-201ENSMUST00000145247 762 ntBASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Fhad1os1-201ENSMUST00000146094 997 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Gm14457-201ENSMUST00000148069 1161 ntBASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Glipr1l2-202ENSMUST00000148897 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Gm12746-201ENSMUST00000151369 615 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Gm23021-201ENSMUST00000158765 169 ntBASIC7.8□□□□□ -1.16
Trim39Q9ESN2 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Gm2951-201ENSMUST00000169447 490 ntBASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Gm2930-201ENSMUST00000170403 474 ntBASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Gm5435-201ENSMUST00000179295 1150 ntBASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Gm27406-201ENSMUST00000184881 182 ntBASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Gm43232-201ENSMUST00000201346 364 ntBASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Tpi-rs11-201ENSMUST00000202145 310 ntBASIC7.8□□□□□ -1.16
Trim39Q9ESN2 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 1600020E01Rik-203ENSMUST00000204008 713 ntTSL 5 BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Gm5037-201ENSMUST00000205327 618 ntBASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Gm35392-201ENSMUST00000209934 2121 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 AL929417.1-201ENSMUST00000214901 124 ntBASIC7.8□□□□□ -1.16
Trim39Q9ESN2 4930404H11Rik-202ENSMUST00000222756 1271 ntTSL 5 BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 AC126939.2-201ENSMUST00000225989 307 ntBASIC7.8□□□□□ -1.16
Trim39Q9ESN2 AC118250.1-201ENSMUST00000228569 875 ntBASIC7.8□□□□□ -1.16
Trim39Q9ESN2 8030411F24Rik-201ENSMUST00000028933 602 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Cst11-201ENSMUST00000028934 615 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Fxyd2-201ENSMUST00000041005 632 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Dcpp1-201ENSMUST00000068580 617 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Gm9234-201ENSMUST00000077747 492 ntBASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Gm10036-201ENSMUST00000079733 537 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Parva-203ENSMUST00000106643 2222 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Nos1-207ENSMUST00000171055 4388 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Gm8354-201ENSMUST00000189223 1373 ntBASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Aoah-201ENSMUST00000021757 2921 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Rpap2-203ENSMUST00000112651 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Olfr669-203ENSMUST00000214260 2336 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Trps1-205ENSMUST00000183997 3627 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 AC102431.2-201ENSMUST00000224071 2448 ntBASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Epha4-201ENSMUST00000027451 6328 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Mapre2-209ENSMUST00000170802 3936 ntAPPRIS ALT1 TSL 5 BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Gm43280-201ENSMUST00000202958 1550 ntBASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Cyp2e1-202ENSMUST00000209253 1582 ntTSL 5 BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Serpina1a-201ENSMUST00000072876 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 AC125095.1-201ENSMUST00000228387 2020 ntBASIC7.79□□□□□ -1.16
Trim39Q9ESN2 Ano4-208ENSMUST00000182613 3880 ntAPPRIS ALT1 TSL 5 BASIC7.79□□□□□ -1.16
Trim39Q9ESN2 Fam107a-201ENSMUST00000036070 3151 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim39Q9ESN2 Synj2-201ENSMUST00000061091 4072 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim39Q9ESN2 Wrn-204ENSMUST00000211498 4856 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim39Q9ESN2 CT009530.1-201ENSMUST00000227348 2927 ntBASIC7.79□□□□□ -1.16
Trim39Q9ESN2 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
Trim39Q9ESN2 Hrh4-201ENSMUST00000041676 1537 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim39Q9ESN2 Trim38-203ENSMUST00000226039 1999 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Trim39Q9ESN2 Rnf11-202ENSMUST00000064167 1955 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim39Q9ESN2 Cep112-216ENSMUST00000182729 2850 ntTSL 5 BASIC7.79□□□□□ -1.16
Trim39Q9ESN2 Gsdmc4-202ENSMUST00000188108 2085 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trim39Q9ESN2 Ighv1-22-201ENSMUST00000103507 351 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Trim39Q9ESN2 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC7.79□□□□□ -1.16
Trim39Q9ESN2 Gm3618-201ENSMUST00000112726 384 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Trim39Q9ESN2 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Trim39Q9ESN2 Obp2b-201ENSMUST00000114192 732 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Trim39Q9ESN2 Gm14621-201ENSMUST00000117709 689 ntBASIC7.79□□□□□ -1.16
Trim39Q9ESN2 Gm11546-201ENSMUST00000120297 354 ntBASIC7.79□□□□□ -1.16
Trim39Q9ESN2 Gm378-201ENSMUST00000120797 820 ntBASIC7.79□□□□□ -1.16
Trim39Q9ESN2 Gm11404-201ENSMUST00000120872 494 ntBASIC7.79□□□□□ -1.16
Trim39Q9ESN2 4930417H01Rik-201ENSMUST00000123403 1233 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim39Q9ESN2 Gm13936-201ENSMUST00000130416 715 ntTSL 3 BASIC7.79□□□□□ -1.16
Trim39Q9ESN2 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim39Q9ESN2 1700120E14Rik-201ENSMUST00000137034 732 ntTSL 3 BASIC7.79□□□□□ -1.16
Trim39Q9ESN2 Gm13056-201ENSMUST00000142429 564 ntTSL 2 BASIC7.79□□□□□ -1.16
Trim39Q9ESN2 Hk1os-203ENSMUST00000143122 1218 ntTSL 2 BASIC7.79□□□□□ -1.16
Trim39Q9ESN2 Gm13645-201ENSMUST00000145163 699 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim39Q9ESN2 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Trim39Q9ESN2 Gm25037-201ENSMUST00000175418 110 ntBASIC7.79□□□□□ -1.16
Trim39Q9ESN2 Gm21965-201ENSMUST00000177770 384 ntBASIC7.79□□□□□ -1.16
Trim39Q9ESN2 Gm11109-201ENSMUST00000180289 384 ntBASIC7.79□□□□□ -1.16
Trim39Q9ESN2 Gm19705-204ENSMUST00000181524 413 ntTSL 2 BASIC7.79□□□□□ -1.16
Trim39Q9ESN2 Gm4823-201ENSMUST00000181990 984 ntBASIC7.79□□□□□ -1.16
Trim39Q9ESN2 Gm17800-201ENSMUST00000182466 971 ntBASIC7.79□□□□□ -1.16
Trim39Q9ESN2 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC7.79□□□□□ -1.16
Trim39Q9ESN2 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC7.79□□□□□ -1.16
Trim39Q9ESN2 Gm27163-201ENSMUST00000184767 409 ntBASIC7.79□□□□□ -1.16
Trim39Q9ESN2 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim39Q9ESN2 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trim39Q9ESN2 Gm42605-201ENSMUST00000199565 385 ntBASIC7.79□□□□□ -1.16
Trim39Q9ESN2 Gm44267-201ENSMUST00000204132 385 ntBASIC7.79□□□□□ -1.16
Trim39Q9ESN2 Gm8035-201ENSMUST00000204625 687 ntBASIC7.79□□□□□ -1.16
Trim39Q9ESN2 Gm44118-201ENSMUST00000204665 229 ntBASIC7.79□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms