Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Gm25435-201ENSMUST00000158277 267 ntBASIC8.73□□□□□ -1.01
StrcQ8VIM6 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
StrcQ8VIM6 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
StrcQ8VIM6 n-R5s95-201ENSMUST00000082684 118 ntBASIC8.73□□□□□ -1.01
StrcQ8VIM6 Gm6990-201ENSMUST00000086830 348 ntBASIC8.73□□□□□ -1.01
StrcQ8VIM6 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC8.73□□□□□ -1.01
StrcQ8VIM6 Palb2-202ENSMUST00000098068 3750 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
StrcQ8VIM6 Gm45407-201ENSMUST00000209499 3676 ntBASIC8.73□□□□□ -1.01
StrcQ8VIM6 Csnk1d-202ENSMUST00000070575 3500 ntAPPRIS ALT1 TSL 1 (best) BASIC8.73□□□□□ -1.01
StrcQ8VIM6 Slc5a6-205ENSMUST00000202520 3248 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
StrcQ8VIM6 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
StrcQ8VIM6 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
StrcQ8VIM6 Otoa-201ENSMUST00000047025 3773 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
StrcQ8VIM6 Ncoa1-209ENSMUST00000220434 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
StrcQ8VIM6 Meis1-209ENSMUST00000185131 3346 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
StrcQ8VIM6 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
StrcQ8VIM6 Lmx1a-202ENSMUST00000111377 3200 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
StrcQ8VIM6 Nek6-201ENSMUST00000054234 10338 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
StrcQ8VIM6 Lpin1-202ENSMUST00000111067 5433 ntAPPRIS P4 TSL 1 (best) BASIC8.72□□□□□ -1.01
StrcQ8VIM6 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC8.72□□□□□ -1.01
StrcQ8VIM6 Plekha6-201ENSMUST00000038295 7388 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
StrcQ8VIM6 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC8.72□□□□□ -1.01
StrcQ8VIM6 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
StrcQ8VIM6 Tec-203ENSMUST00000113594 2580 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
StrcQ8VIM6 Srbd1-201ENSMUST00000095187 3530 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
StrcQ8VIM6 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC8.72□□□□□ -1.01
StrcQ8VIM6 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC8.72□□□□□ -1.01
StrcQ8VIM6 Myom2-201ENSMUST00000033842 5075 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
StrcQ8VIM6 Rrp8-202ENSMUST00000098148 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
StrcQ8VIM6 Gm11821-201ENSMUST00000117335 979 ntBASIC8.72□□□□□ -1.01
StrcQ8VIM6 Gm5601-201ENSMUST00000118909 972 ntBASIC8.72□□□□□ -1.01
StrcQ8VIM6 Gm14466-201ENSMUST00000119028 451 ntBASIC8.72□□□□□ -1.01
StrcQ8VIM6 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC8.72□□□□□ -1.01
StrcQ8VIM6 Gm17137-202ENSMUST00000165729 957 ntBASIC8.72□□□□□ -1.01
StrcQ8VIM6 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
StrcQ8VIM6 Gm24756-201ENSMUST00000177002 96 ntBASIC8.72□□□□□ -1.01
StrcQ8VIM6 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
StrcQ8VIM6 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC8.72□□□□□ -1.01
StrcQ8VIM6 Gm29784-201ENSMUST00000196217 406 ntBASIC8.72□□□□□ -1.01
StrcQ8VIM6 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
StrcQ8VIM6 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
StrcQ8VIM6 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
StrcQ8VIM6 Gm42668-201ENSMUST00000200747 2487 ntBASIC8.72□□□□□ -1.01
StrcQ8VIM6 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
StrcQ8VIM6 Txk-201ENSMUST00000113604 2260 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
StrcQ8VIM6 Lyn-202ENSMUST00000103010 3387 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
StrcQ8VIM6 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
StrcQ8VIM6 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
StrcQ8VIM6 Itgam-205ENSMUST00000120355 3701 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
StrcQ8VIM6 Usp28-203ENSMUST00000213874 4109 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
StrcQ8VIM6 Gimap4-201ENSMUST00000067506 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
StrcQ8VIM6 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
StrcQ8VIM6 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
StrcQ8VIM6 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
StrcQ8VIM6 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
StrcQ8VIM6 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.01
StrcQ8VIM6 Gm14018-201ENSMUST00000119042 455 ntBASIC8.71□□□□□ -1.01
StrcQ8VIM6 Gm7189-201ENSMUST00000119811 429 ntBASIC8.71□□□□□ -1.01
StrcQ8VIM6 Gm12152-201ENSMUST00000122465 684 ntBASIC8.71□□□□□ -1.01
StrcQ8VIM6 Gm25780-201ENSMUST00000122528 253 ntBASIC8.71□□□□□ -1.01
StrcQ8VIM6 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
StrcQ8VIM6 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC8.71□□□□□ -1.01
StrcQ8VIM6 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC8.71□□□□□ -1.01
StrcQ8VIM6 Gm23810-201ENSMUST00000175150 74 ntBASIC8.71□□□□□ -1.01
StrcQ8VIM6 Gm28527-201ENSMUST00000185210 297 ntBASIC8.71□□□□□ -1.01
StrcQ8VIM6 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
StrcQ8VIM6 Gm37920-201ENSMUST00000192952 749 ntBASIC8.71□□□□□ -1.01
StrcQ8VIM6 Gm37072-201ENSMUST00000194570 837 ntBASIC8.71□□□□□ -1.01
StrcQ8VIM6 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC8.71□□□□□ -1.01
StrcQ8VIM6 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC8.71□□□□□ -1.01
StrcQ8VIM6 Mir425-201ENSMUST00000083645 85 ntBASIC8.71□□□□□ -1.01
StrcQ8VIM6 Cenpo-205ENSMUST00000140975 4348 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.01
StrcQ8VIM6 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
StrcQ8VIM6 Urb1-203ENSMUST00000140920 7344 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
StrcQ8VIM6 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC8.71□□□□□ -1.02
StrcQ8VIM6 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
StrcQ8VIM6 Sox2ot-215ENSMUST00000199171 3486 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
StrcQ8VIM6 Tex9-201ENSMUST00000085358 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
StrcQ8VIM6 AC124680.1-201ENSMUST00000223923 1585 ntBASIC8.71□□□□□ -1.02
StrcQ8VIM6 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
StrcQ8VIM6 Kctd7-201ENSMUST00000040616 4291 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
StrcQ8VIM6 Ttc30a1-201ENSMUST00000099994 3721 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
StrcQ8VIM6 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
StrcQ8VIM6 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC8.71□□□□□ -1.02
StrcQ8VIM6 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
StrcQ8VIM6 Tmc2-202ENSMUST00000166774 2667 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
StrcQ8VIM6 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
StrcQ8VIM6 Tcf7l2-211ENSMUST00000111658 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
StrcQ8VIM6 Gm38262-201ENSMUST00000194760 1382 ntBASIC8.71□□□□□ -1.02
StrcQ8VIM6 Asph-209ENSMUST00000108335 2514 ntTSL 5 BASIC8.71□□□□□ -1.02
StrcQ8VIM6 Clcn7-201ENSMUST00000040729 4071 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
StrcQ8VIM6 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
StrcQ8VIM6 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
StrcQ8VIM6 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
StrcQ8VIM6 Commd8-201ENSMUST00000013693 3895 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
StrcQ8VIM6 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
StrcQ8VIM6 Gm25724-201ENSMUST00000104531 117 ntBASIC8.7□□□□□ -1.02
StrcQ8VIM6 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC8.7□□□□□ -1.02
StrcQ8VIM6 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
StrcQ8VIM6 Gm37809-201ENSMUST00000195050 931 ntBASIC8.7□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms