Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Clrn1Q8K445 Tmem161b-206ENSMUST00000225069 2414 ntBASIC7.25□□□□□ -1.25
Clrn1Q8K445 Gm37465-201ENSMUST00000192845 3290 ntBASIC7.25□□□□□ -1.25
Clrn1Q8K445 Tpo-201ENSMUST00000021005 3299 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Clrn1Q8K445 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC7.24□□□□□ -1.25
Clrn1Q8K445 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC7.24□□□□□ -1.25
Clrn1Q8K445 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Clrn1Q8K445 Gm44777-201ENSMUST00000205941 4052 ntBASIC7.24□□□□□ -1.25
Clrn1Q8K445 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Clrn1Q8K445 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Clrn1Q8K445 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Clrn1Q8K445 Gm15421-202ENSMUST00000118224 399 ntBASIC7.24□□□□□ -1.25
Clrn1Q8K445 Gm13552-201ENSMUST00000118837 417 ntBASIC7.24□□□□□ -1.25
Clrn1Q8K445 Gm14450-201ENSMUST00000119984 240 ntBASIC7.24□□□□□ -1.25
Clrn1Q8K445 Gm12967-201ENSMUST00000122147 289 ntBASIC7.24□□□□□ -1.25
Clrn1Q8K445 1700125H03Rik-202ENSMUST00000139265 637 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Clrn1Q8K445 Gm15389-201ENSMUST00000153774 666 ntTSL 3 BASIC7.24□□□□□ -1.25
Clrn1Q8K445 Gm17129-201ENSMUST00000168168 505 ntBASIC7.24□□□□□ -1.25
Clrn1Q8K445 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC7.24□□□□□ -1.25
Clrn1Q8K445 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC7.24□□□□□ -1.25
Clrn1Q8K445 Pid1-203ENSMUST00000175996 892 ntTSL 3 BASIC7.24□□□□□ -1.25
Clrn1Q8K445 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Clrn1Q8K445 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC7.24□□□□□ -1.25
Clrn1Q8K445 Gm28060-201ENSMUST00000191554 189 ntBASIC7.24□□□□□ -1.25
Clrn1Q8K445 Gm37185-201ENSMUST00000193852 410 ntBASIC7.24□□□□□ -1.25
Clrn1Q8K445 Gm37002-201ENSMUST00000194560 373 ntBASIC7.24□□□□□ -1.25
Clrn1Q8K445 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC7.24□□□□□ -1.25
Clrn1Q8K445 Gm23604-202ENSMUST00000198428 137 ntBASIC7.24□□□□□ -1.25
Clrn1Q8K445 Gm17660-203ENSMUST00000198485 522 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Clrn1Q8K445 Gm42745-201ENSMUST00000200904 193 ntTSL 3 BASIC7.24□□□□□ -1.25
Clrn1Q8K445 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC7.24□□□□□ -1.25
Clrn1Q8K445 Gm7663-201ENSMUST00000201151 1240 ntBASIC7.24□□□□□ -1.25
Clrn1Q8K445 Gm5307-201ENSMUST00000204772 760 ntBASIC7.24□□□□□ -1.25
Clrn1Q8K445 Gm19254-201ENSMUST00000204828 294 ntBASIC7.24□□□□□ -1.25
Clrn1Q8K445 Olfr472-202ENSMUST00000210420 1083 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Clrn1Q8K445 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC7.24□□□□□ -1.25
Clrn1Q8K445 Gm18378-201ENSMUST00000216245 628 ntBASIC7.24□□□□□ -1.25
Clrn1Q8K445 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC7.24□□□□□ -1.25
Clrn1Q8K445 AC164629.1-201ENSMUST00000220250 1113 ntBASIC7.24□□□□□ -1.25
Clrn1Q8K445 Gm46317-201ENSMUST00000221103 393 ntBASIC7.24□□□□□ -1.25
Clrn1Q8K445 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC7.24□□□□□ -1.25
Clrn1Q8K445 Defb3-201ENSMUST00000033852 275 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Clrn1Q8K445 Ndufa7-201ENSMUST00000048249 508 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Clrn1Q8K445 Olfr1449-201ENSMUST00000056005 948 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Clrn1Q8K445 Vmn1r42-201ENSMUST00000089419 1098 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Clrn1Q8K445 Olfr1231-201ENSMUST00000099786 942 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Clrn1Q8K445 Gm31152-201ENSMUST00000210319 2171 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Clrn1Q8K445 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Clrn1Q8K445 Zfp964-201ENSMUST00000169125 1416 ntTSL 3 BASIC7.24□□□□□ -1.25
Clrn1Q8K445 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Clrn1Q8K445 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC7.24□□□□□ -1.25
Clrn1Q8K445 Gm37647-201ENSMUST00000194556 3143 ntBASIC7.24□□□□□ -1.25
Clrn1Q8K445 Gm43254-201ENSMUST00000199187 2491 ntBASIC7.24□□□□□ -1.25
Clrn1Q8K445 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Clrn1Q8K445 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Clrn1Q8K445 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Clrn1Q8K445 Galnt7-202ENSMUST00000110316 3413 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Clrn1Q8K445 Gm19719-201ENSMUST00000200934 4230 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Clrn1Q8K445 Arpp21-202ENSMUST00000070218 3181 ntTSL 5 BASIC7.24□□□□□ -1.25
Clrn1Q8K445 Gm37995-201ENSMUST00000194958 1714 ntBASIC7.24□□□□□ -1.25
Clrn1Q8K445 Folh1-202ENSMUST00000107271 2516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Clrn1Q8K445 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Clrn1Q8K445 Nudt7-202ENSMUST00000073521 3543 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
Clrn1Q8K445 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC7.23□□□□□ -1.25
Clrn1Q8K445 CT009711.1-201ENSMUST00000223992 3040 ntBASIC7.23□□□□□ -1.25
Clrn1Q8K445 AC124675.1-201ENSMUST00000226263 1390 ntBASIC7.23□□□□□ -1.25
Clrn1Q8K445 Erp44-201ENSMUST00000030028 2624 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Clrn1Q8K445 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Clrn1Q8K445 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Clrn1Q8K445 Gm37060-201ENSMUST00000194997 2397 ntBASIC7.23□□□□□ -1.25
Clrn1Q8K445 Gm43571-201ENSMUST00000200067 3098 ntBASIC7.23□□□□□ -1.25
Clrn1Q8K445 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Clrn1Q8K445 Gm22543-201ENSMUST00000104347 94 ntBASIC7.23□□□□□ -1.25
Clrn1Q8K445 Tsacc-201ENSMUST00000010682 481 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Clrn1Q8K445 Gm12075-201ENSMUST00000117426 397 ntBASIC7.23□□□□□ -1.25
Clrn1Q8K445 Gm12955-201ENSMUST00000119689 957 ntBASIC7.23□□□□□ -1.25
Clrn1Q8K445 Gm12361-201ENSMUST00000119806 1044 ntBASIC7.23□□□□□ -1.25
Clrn1Q8K445 Gm14300-201ENSMUST00000120800 946 ntBASIC7.23□□□□□ -1.25
Clrn1Q8K445 Gm16407-201ENSMUST00000122134 567 ntBASIC7.23□□□□□ -1.25
Clrn1Q8K445 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC7.23□□□□□ -1.25
Clrn1Q8K445 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Clrn1Q8K445 Mgst1-207ENSMUST00000140932 742 ntTSL 3 BASIC7.23□□□□□ -1.25
Clrn1Q8K445 Gm13857-202ENSMUST00000141091 617 ntTSL 3 BASIC7.23□□□□□ -1.25
Clrn1Q8K445 Gm16015-201ENSMUST00000154897 390 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Clrn1Q8K445 Rpl29-ps1-201ENSMUST00000161849 508 ntBASIC7.23□□□□□ -1.25
Clrn1Q8K445 Gm26197-201ENSMUST00000175033 115 ntBASIC7.23□□□□□ -1.25
Clrn1Q8K445 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC7.23□□□□□ -1.25
Clrn1Q8K445 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Clrn1Q8K445 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Clrn1Q8K445 Gm29143-201ENSMUST00000189462 201 ntBASIC7.23□□□□□ -1.25
Clrn1Q8K445 Gm5541-201ENSMUST00000193248 1113 ntBASIC7.23□□□□□ -1.25
Clrn1Q8K445 Prkar2a-206ENSMUST00000195405 1143 ntTSL 5 BASIC7.23□□□□□ -1.25
Clrn1Q8K445 Gm40319-201ENSMUST00000199785 481 ntBASIC7.23□□□□□ -1.25
Clrn1Q8K445 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Clrn1Q8K445 Gm43479-201ENSMUST00000200801 529 ntTSL 2 BASIC7.23□□□□□ -1.25
Clrn1Q8K445 Mrps33-204ENSMUST00000201461 717 ntTSL 2 BASIC7.23□□□□□ -1.25
Clrn1Q8K445 Gm42472-201ENSMUST00000201626 859 ntBASIC7.23□□□□□ -1.25
Clrn1Q8K445 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC7.23□□□□□ -1.25
Clrn1Q8K445 1600027J07Rik-201ENSMUST00000209501 489 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Clrn1Q8K445 Gm5535-206ENSMUST00000210067 679 ntTSL 5 BASIC7.23□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms