Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 4933406F09Rik-202ENSMUST00000180508 680 ntTSL 1 (best) BASIC8□□□□□ -1.13
Pcdh19Q80TF3 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC8□□□□□ -1.13
Pcdh19Q80TF3 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC8□□□□□ -1.13
Pcdh19Q80TF3 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC8□□□□□ -1.13
Pcdh19Q80TF3 Gm8498-201ENSMUST00000188227 974 ntBASIC8□□□□□ -1.13
Pcdh19Q80TF3 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC8□□□□□ -1.13
Pcdh19Q80TF3 1700003L19Rik-201ENSMUST00000190074 746 ntTSL 1 (best) BASIC8□□□□□ -1.13
Pcdh19Q80TF3 Gm37543-201ENSMUST00000192443 1031 ntBASIC8□□□□□ -1.13
Pcdh19Q80TF3 Gm42667-201ENSMUST00000196132 234 ntBASIC8□□□□□ -1.13
Pcdh19Q80TF3 Gm6366-201ENSMUST00000198766 826 ntBASIC8□□□□□ -1.13
Pcdh19Q80TF3 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC8□□□□□ -1.13
Pcdh19Q80TF3 Gm9497-201ENSMUST00000199908 538 ntBASIC8□□□□□ -1.13
Pcdh19Q80TF3 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC8□□□□□ -1.13
Pcdh19Q80TF3 Gm43967-201ENSMUST00000203787 301 ntBASIC8□□□□□ -1.13
Pcdh19Q80TF3 Olfr214-202ENSMUST00000203867 1255 ntAPPRIS P1 TSL 3 BASIC8□□□□□ -1.13
Pcdh19Q80TF3 Ceacam-ps1-201ENSMUST00000205380 794 ntTSL 2 BASIC8□□□□□ -1.13
Pcdh19Q80TF3 Gm44721-201ENSMUST00000206978 472 ntBASIC8□□□□□ -1.13
Pcdh19Q80TF3 Gm44691-201ENSMUST00000207562 324 ntTSL 5 BASIC8□□□□□ -1.13
Pcdh19Q80TF3 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC8□□□□□ -1.13
Pcdh19Q80TF3 Gm45908-201ENSMUST00000212977 1177 ntBASIC8□□□□□ -1.13
Pcdh19Q80TF3 Gm18292-201ENSMUST00000216673 919 ntBASIC8□□□□□ -1.13
Pcdh19Q80TF3 AC160635.1-201ENSMUST00000216731 474 ntBASIC8□□□□□ -1.13
Pcdh19Q80TF3 4930471E19Rik-202ENSMUST00000219150 737 ntTSL 3 BASIC8□□□□□ -1.13
Pcdh19Q80TF3 Gm21941-201ENSMUST00000221121 562 ntBASIC8□□□□□ -1.13
Pcdh19Q80TF3 AC151982.1-201ENSMUST00000223546 464 ntBASIC8□□□□□ -1.13
Pcdh19Q80TF3 AC158531.2-201ENSMUST00000224264 473 ntBASIC8□□□□□ -1.13
Pcdh19Q80TF3 AC154184.2-201ENSMUST00000225335 349 ntBASIC8□□□□□ -1.13
Pcdh19Q80TF3 CT030194.2-201ENSMUST00000225752 379 ntBASIC8□□□□□ -1.13
Pcdh19Q80TF3 AC124709.1-201ENSMUST00000227296 620 ntBASIC8□□□□□ -1.13
Pcdh19Q80TF3 AC167013.3-201ENSMUST00000228110 989 ntBASIC8□□□□□ -1.13
Pcdh19Q80TF3 Slurp1-201ENSMUST00000023261 567 ntTSL 5 BASIC8□□□□□ -1.13
Pcdh19Q80TF3 Cd74-201ENSMUST00000050487 1218 ntTSL 1 (best) BASIC8□□□□□ -1.13
Pcdh19Q80TF3 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC8□□□□□ -1.13
Pcdh19Q80TF3 Mir185-201ENSMUST00000083530 65 ntBASIC8□□□□□ -1.13
Pcdh19Q80TF3 Gm5614-201ENSMUST00000091097 318 ntBASIC8□□□□□ -1.13
Pcdh19Q80TF3 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC8□□□□□ -1.13
Pcdh19Q80TF3 Olfr1303-201ENSMUST00000099609 939 ntAPPRIS P1 BASIC8□□□□□ -1.13
Pcdh19Q80TF3 Olfr1226-201ENSMUST00000099790 933 ntAPPRIS P1 BASIC8□□□□□ -1.13
Pcdh19Q80TF3 Mybbp1a-201ENSMUST00000045633 4358 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Pcdh19Q80TF3 Atg4a-201ENSMUST00000112971 2202 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Pcdh19Q80TF3 Klrb1b-201ENSMUST00000032472 2228 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
Pcdh19Q80TF3 1700024J04Rik-201ENSMUST00000093146 1821 ntBASIC8□□□□□ -1.13
Pcdh19Q80TF3 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Pcdh19Q80TF3 Rpgr-203ENSMUST00000073392 2926 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
Pcdh19Q80TF3 Pum3-201ENSMUST00000076219 3462 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Pcdh19Q80TF3 Gm30400-202ENSMUST00000210562 2115 ntTSL 1 (best) BASIC8□□□□□ -1.13
Pcdh19Q80TF3 Prkcz-202ENSMUST00000103178 4083 ntTSL 1 (best) BASIC8□□□□□ -1.13
Pcdh19Q80TF3 Nemp1-201ENSMUST00000048099 6002 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
Pcdh19Q80TF3 Dhx30-202ENSMUST00000111991 3829 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Pcdh19Q80TF3 4931406B18Rik-208ENSMUST00000191516 2566 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
Pcdh19Q80TF3 Frk-202ENSMUST00000170771 3406 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Pcdh19Q80TF3 Gm28813-201ENSMUST00000186293 1497 ntTSL 5 BASIC8□□□□□ -1.13
Pcdh19Q80TF3 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC8□□□□□ -1.13
Pcdh19Q80TF3 Gm29324-202ENSMUST00000188242 1497 ntTSL 5 BASIC8□□□□□ -1.13
Pcdh19Q80TF3 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC8□□□□□ -1.13
Pcdh19Q80TF3 9330136K24Rik-201ENSMUST00000180842 2478 ntTSL 1 (best) BASIC8□□□□□ -1.13
Pcdh19Q80TF3 Prg4-202ENSMUST00000111901 3495 ntTSL 5 BASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 CT009530.1-201ENSMUST00000227348 2927 ntBASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 Tbc1d24-208ENSMUST00000201089 4081 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 Camk2a-201ENSMUST00000025519 3244 ntTSL 5 BASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 Cenpi-201ENSMUST00000081064 3227 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 Trim12a-202ENSMUST00000106837 1389 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 Icosl-201ENSMUST00000105393 2814 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 Wdr11-201ENSMUST00000084519 4550 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 Arl6-201ENSMUST00000023405 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 Fam13a-201ENSMUST00000089860 5786 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 Gm42759-201ENSMUST00000195915 2439 ntBASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 Olfr1128-201ENSMUST00000102624 936 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 Cep112-204ENSMUST00000106724 678 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 Olfr639-201ENSMUST00000106862 1020 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 Homer1-210ENSMUST00000109497 779 ntTSL 5 BASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 Homer1-211ENSMUST00000109498 815 ntTSL 5 BASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 Gm13407-201ENSMUST00000118256 360 ntBASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 Gm14645-201ENSMUST00000118597 417 ntBASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 Myl1-202ENSMUST00000119429 803 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 Gm22562-201ENSMUST00000157334 111 ntBASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 Gm26487-201ENSMUST00000158022 94 ntBASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 Gm16563-201ENSMUST00000162673 423 ntBASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 Gm17032-201ENSMUST00000164367 338 ntTSL 3 BASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 Zfp661-204ENSMUST00000164551 1284 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 Cphx2-201ENSMUST00000168149 1710 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 Mlip-212ENSMUST00000184848 1019 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 Gm28853-202ENSMUST00000188084 1157 ntTSL 5 BASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 Gm37303-201ENSMUST00000194202 1559 ntBASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 A330015K06Rik-201ENSMUST00000195489 4286 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 A230001M10Rik-203ENSMUST00000198712 1747 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 Gm42581-201ENSMUST00000201774 966 ntBASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 Slc5a6-205ENSMUST00000202520 3248 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 Gm20074-201ENSMUST00000208144 484 ntBASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 Gm5339-201ENSMUST00000210551 1102 ntBASIC7.99□□□□□ -1.13
Pcdh19Q80TF3 Olfr503-202ENSMUST00000211693 966 ntAPPRIS ALT1 BASIC7.99□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms