Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm27008-202ENSMUST00000182414 604 ntTSL 3 BASIC7.25□□□□□ -1.25
ClpbQ60649 Ighv13-2-202ENSMUST00000183954 302 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
ClpbQ60649 Gm553-201ENSMUST00000189527 701 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
ClpbQ60649 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
ClpbQ60649 Gm5708-201ENSMUST00000196289 886 ntBASIC7.25□□□□□ -1.25
ClpbQ60649 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC7.25□□□□□ -1.25
ClpbQ60649 1700021F02Rik-201ENSMUST00000197576 350 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
ClpbQ60649 Mrpl24-201ENSMUST00000019854 1226 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
ClpbQ60649 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
ClpbQ60649 Gm44712-201ENSMUST00000206250 1076 ntBASIC7.25□□□□□ -1.25
ClpbQ60649 Gm8489-201ENSMUST00000209876 1152 ntBASIC7.25□□□□□ -1.25
ClpbQ60649 Gm32443-201ENSMUST00000217880 707 ntTSL 3 BASIC7.25□□□□□ -1.25
ClpbQ60649 AC130673.1-201ENSMUST00000227992 435 ntBASIC7.25□□□□□ -1.25
ClpbQ60649 AC165155.1-201ENSMUST00000228932 445 ntBASIC7.25□□□□□ -1.25
ClpbQ60649 Acrbp-201ENSMUST00000032481 584 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
ClpbQ60649 Olfr648-201ENSMUST00000052659 951 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
ClpbQ60649 Rps6-ps1-201ENSMUST00000074205 750 ntBASIC7.25□□□□□ -1.25
ClpbQ60649 Xlr4a-201ENSMUST00000078775 1162 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
ClpbQ60649 Olfr224-201ENSMUST00000081102 945 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
ClpbQ60649 Snora9-201ENSMUST00000082579 133 ntBASIC7.25□□□□□ -1.25
ClpbQ60649 Defa37-201ENSMUST00000084040 403 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
ClpbQ60649 Klrk1-202ENSMUST00000095412 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
ClpbQ60649 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
ClpbQ60649 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
ClpbQ60649 Gm44441-201ENSMUST00000203642 2475 ntBASIC7.25□□□□□ -1.25
ClpbQ60649 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
ClpbQ60649 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
ClpbQ60649 Skint7-204ENSMUST00000163281 1423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
ClpbQ60649 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
ClpbQ60649 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC7.25□□□□□ -1.25
ClpbQ60649 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC7.25□□□□□ -1.25
ClpbQ60649 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
ClpbQ60649 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
ClpbQ60649 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC7.25□□□□□ -1.25
ClpbQ60649 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
ClpbQ60649 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
ClpbQ60649 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
ClpbQ60649 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC7.25□□□□□ -1.25
ClpbQ60649 Gm28649-201ENSMUST00000189153 1581 ntBASIC7.25□□□□□ -1.25
ClpbQ60649 Gm38302-201ENSMUST00000191676 2076 ntBASIC7.24□□□□□ -1.25
ClpbQ60649 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
ClpbQ60649 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
ClpbQ60649 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
ClpbQ60649 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
ClpbQ60649 Nrxn3-210ENSMUST00000167887 3303 ntTSL 5 BASIC7.24□□□□□ -1.25
ClpbQ60649 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
ClpbQ60649 Gm15759-201ENSMUST00000161126 3723 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
ClpbQ60649 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
ClpbQ60649 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
ClpbQ60649 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC7.24□□□□□ -1.25
ClpbQ60649 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC7.24□□□□□ -1.25
ClpbQ60649 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
ClpbQ60649 Gm6356-201ENSMUST00000166618 1757 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
ClpbQ60649 Igkv8-27-201ENSMUST00000103381 300 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
ClpbQ60649 Gstm7-203ENSMUST00000106688 783 ntTSL 2 BASIC7.24□□□□□ -1.25
ClpbQ60649 Cisd3-202ENSMUST00000107584 546 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
ClpbQ60649 Gm13858-201ENSMUST00000118862 671 ntBASIC7.24□□□□□ -1.25
ClpbQ60649 Gm15047-201ENSMUST00000118891 454 ntBASIC7.24□□□□□ -1.25
ClpbQ60649 Gm15586-201ENSMUST00000121218 528 ntBASIC7.24□□□□□ -1.25
ClpbQ60649 Gm16015-201ENSMUST00000154897 390 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
ClpbQ60649 Gm10680-201ENSMUST00000156612 702 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
ClpbQ60649 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC7.24□□□□□ -1.25
ClpbQ60649 Hist2h2bb-201ENSMUST00000177113 381 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
ClpbQ60649 Gm6176-201ENSMUST00000178209 906 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
ClpbQ60649 Gm4567-201ENSMUST00000178591 906 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
ClpbQ60649 Gm10668-201ENSMUST00000179491 906 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
ClpbQ60649 Mir8099-2-201ENSMUST00000183568 127 ntBASIC7.24□□□□□ -1.25
ClpbQ60649 Mir8099-1-201ENSMUST00000184238 127 ntBASIC7.24□□□□□ -1.25
ClpbQ60649 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
ClpbQ60649 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
ClpbQ60649 Gm4545-201ENSMUST00000190797 603 ntBASIC7.24□□□□□ -1.25
ClpbQ60649 A930028O11Rik-201ENSMUST00000197219 1108 ntBASIC7.24□□□□□ -1.25
ClpbQ60649 Gm7542-201ENSMUST00000201140 777 ntBASIC7.24□□□□□ -1.25
ClpbQ60649 Gm5086-203ENSMUST00000210897 1136 ntTSL 5 BASIC7.24□□□□□ -1.25
ClpbQ60649 Gm36719-201ENSMUST00000219518 927 ntTSL 5 BASIC7.24□□□□□ -1.25
ClpbQ60649 AC162183.1-201ENSMUST00000224843 472 ntBASIC7.24□□□□□ -1.25
ClpbQ60649 AC129537.1-202ENSMUST00000226619 430 ntBASIC7.24□□□□□ -1.25
ClpbQ60649 Rida-201ENSMUST00000022946 1004 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
ClpbQ60649 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
ClpbQ60649 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC7.24□□□□□ -1.25
ClpbQ60649 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
ClpbQ60649 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
ClpbQ60649 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC7.24□□□□□ -1.25
ClpbQ60649 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
ClpbQ60649 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
ClpbQ60649 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
ClpbQ60649 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
ClpbQ60649 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
ClpbQ60649 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
ClpbQ60649 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC7.24□□□□□ -1.25
ClpbQ60649 Serpina3a-203ENSMUST00000185595 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
ClpbQ60649 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
ClpbQ60649 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
ClpbQ60649 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
ClpbQ60649 Scd3-201ENSMUST00000026220 3470 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
ClpbQ60649 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
ClpbQ60649 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
ClpbQ60649 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC7.23□□□□□ -1.25
ClpbQ60649 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
ClpbQ60649 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms