Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Gm28047Q3US59 Ptpn13-201ENSMUST00000048957 7915 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
Gm28047Q3US59 Gm42771-201ENSMUST00000198342 2486 ntBASIC8.82□□□□□ -1
Gm28047Q3US59 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Gm28047Q3US59 Gm38099-201ENSMUST00000193280 3170 ntBASIC8.82□□□□□ -1
Gm28047Q3US59 Gm17083-201ENSMUST00000165849 1366 ntBASIC8.82□□□□□ -1
Gm28047Q3US59 Rgr-201ENSMUST00000022338 4240 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Gm28047Q3US59 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Gm28047Q3US59 Crbn-202ENSMUST00000113239 2084 ntAPPRIS P4 TSL 1 (best) BASIC8.82□□□□□ -1
Gm28047Q3US59 4930471D02Rik-201ENSMUST00000180815 2075 ntTSL 1 (best) BASIC8.82□□□□□ -1
Gm28047Q3US59 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Gm28047Q3US59 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Gm28047Q3US59 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC8.82□□□□□ -1
Gm28047Q3US59 Gc-201ENSMUST00000049209 1801 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Gm28047Q3US59 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Gm28047Q3US59 Tcf24-201ENSMUST00000097824 2639 ntBASIC8.82□□□□□ -1
Gm28047Q3US59 Arfgef1-203ENSMUST00000131556 3424 ntTSL 5 BASIC8.82□□□□□ -1
Gm28047Q3US59 Gm45537-201ENSMUST00000211539 2708 ntBASIC8.82□□□□□ -1
Gm28047Q3US59 Syn3-201ENSMUST00000120638 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Gm28047Q3US59 Nr3c1-202ENSMUST00000097592 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Gm28047Q3US59 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC8.81□□□□□ -1
Gm28047Q3US59 Rian-209ENSMUST00000182406 3476 ntBASIC8.81□□□□□ -1
Gm28047Q3US59 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC8.81□□□□□ -1
Gm28047Q3US59 Hsf2bp-201ENSMUST00000002145 2867 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Gm28047Q3US59 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Gm28047Q3US59 Sos2-203ENSMUST00000182396 3963 ntTSL 5 BASIC8.81□□□□□ -1
Gm28047Q3US59 Olfr686-202ENSMUST00000214147 2646 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Gm28047Q3US59 Olfr686-203ENSMUST00000216143 2612 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Gm28047Q3US59 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Gm28047Q3US59 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC8.81□□□□□ -1
Gm28047Q3US59 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC8.81□□□□□ -1
Gm28047Q3US59 Gm5915-201ENSMUST00000116136 454 ntBASIC8.81□□□□□ -1
Gm28047Q3US59 Gm13352-201ENSMUST00000117515 262 ntBASIC8.81□□□□□ -1
Gm28047Q3US59 Rpl9-ps2-201ENSMUST00000120821 577 ntBASIC8.81□□□□□ -1
Gm28047Q3US59 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC8.81□□□□□ -1
Gm28047Q3US59 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC8.81□□□□□ -1
Gm28047Q3US59 Lrrc8dos-201ENSMUST00000135958 586 ntTSL 1 (best) BASIC8.81□□□□□ -1
Gm28047Q3US59 Defa-ps3-201ENSMUST00000142705 282 ntBASIC8.81□□□□□ -1
Gm28047Q3US59 Gm23187-201ENSMUST00000175746 86 ntBASIC8.81□□□□□ -1
Gm28047Q3US59 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC8.81□□□□□ -1
Gm28047Q3US59 Gm6799-201ENSMUST00000186919 573 ntBASIC8.81□□□□□ -1
Gm28047Q3US59 9930111H07Rik-201ENSMUST00000187270 821 ntTSL 1 (best) BASIC8.81□□□□□ -1
Gm28047Q3US59 Ly6e-208ENSMUST00000188042 714 ntAPPRIS P1 TSL 3 BASIC8.81□□□□□ -1
Gm28047Q3US59 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC8.81□□□□□ -1
Gm28047Q3US59 Gstp3-202ENSMUST00000189808 708 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Gm28047Q3US59 Gm7369-201ENSMUST00000192738 936 ntBASIC8.81□□□□□ -1
Gm28047Q3US59 Gm17771-201ENSMUST00000194477 1147 ntBASIC8.81□□□□□ -1
Gm28047Q3US59 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC8.81□□□□□ -1
Gm28047Q3US59 Gm45283-201ENSMUST00000210593 628 ntBASIC8.81□□□□□ -1
Gm28047Q3US59 1500002F19Rik-203ENSMUST00000211184 375 ntTSL 3 BASIC8.81□□□□□ -1
Gm28047Q3US59 AC161250.1-201ENSMUST00000213426 1111 ntBASIC8.81□□□□□ -1
Gm28047Q3US59 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC8.81□□□□□ -1
Gm28047Q3US59 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC8.81□□□□□ -1
Gm28047Q3US59 AC153532.1-201ENSMUST00000218126 1111 ntBASIC8.81□□□□□ -1
Gm28047Q3US59 AC122924.1-201ENSMUST00000222044 163 ntBASIC8.81□□□□□ -1
Gm28047Q3US59 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC8.81□□□□□ -1
Gm28047Q3US59 AC096628.1-201ENSMUST00000226060 641 ntBASIC8.81□□□□□ -1
Gm28047Q3US59 1700049L16Rik-201ENSMUST00000049520 543 ntBASIC8.81□□□□□ -1
Gm28047Q3US59 Glipr1-201ENSMUST00000074805 1081 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Gm28047Q3US59 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
Gm28047Q3US59 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Gm28047Q3US59 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC8.81□□□□□ -1
Gm28047Q3US59 Osbpl3-204ENSMUST00000114468 6494 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Gm28047Q3US59 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Gm28047Q3US59 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC8.81□□□□□ -1
Gm28047Q3US59 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Gm28047Q3US59 Cep295-203ENSMUST00000098979 7188 ntAPPRIS P2 TSL 5 BASIC8.81□□□□□ -1
Gm28047Q3US59 Glcci1-202ENSMUST00000161217 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Gm28047Q3US59 Cdk6-202ENSMUST00000165117 11525 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Gm28047Q3US59 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Gm28047Q3US59 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC8.81□□□□□ -1
Gm28047Q3US59 Gm38302-201ENSMUST00000191676 2076 ntBASIC8.81□□□□□ -1
Gm28047Q3US59 Gm4894-202ENSMUST00000216428 2294 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Gm28047Q3US59 Gm37968-201ENSMUST00000195131 3201 ntBASIC8.8□□□□□ -1
Gm28047Q3US59 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Gm28047Q3US59 Cpvl-203ENSMUST00000204674 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Gm28047Q3US59 Odf2-206ENSMUST00000113759 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Gm28047Q3US59 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC8.8□□□□□ -1
Gm28047Q3US59 Emsy-201ENSMUST00000038359 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Gm28047Q3US59 Mme-201ENSMUST00000029400 3782 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Gm28047Q3US59 Gm6284-201ENSMUST00000209609 4287 ntBASIC8.8□□□□□ -1
Gm28047Q3US59 Gm23358-201ENSMUST00000103887 110 ntBASIC8.8□□□□□ -1
Gm28047Q3US59 Gm25608-201ENSMUST00000104021 132 ntBASIC8.8□□□□□ -1
Gm28047Q3US59 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Gm28047Q3US59 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Gm28047Q3US59 Dtwd1-201ENSMUST00000110437 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Gm28047Q3US59 Cep41-202ENSMUST00000115130 485 ntTSL 1 (best) BASIC8.8□□□□□ -1
Gm28047Q3US59 Gm25317-201ENSMUST00000116824 129 ntBASIC8.8□□□□□ -1
Gm28047Q3US59 Gm5392-201ENSMUST00000122189 789 ntBASIC8.8□□□□□ -1
Gm28047Q3US59 Gm12811-201ENSMUST00000125237 667 ntTSL 3 BASIC8.8□□□□□ -1
Gm28047Q3US59 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC8.8□□□□□ -1
Gm28047Q3US59 Gm22224-201ENSMUST00000157357 93 ntBASIC8.8□□□□□ -1
Gm28047Q3US59 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Gm28047Q3US59 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC8.8□□□□□ -1
Gm28047Q3US59 Gm8604-201ENSMUST00000183150 965 ntBASIC8.8□□□□□ -1
Gm28047Q3US59 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC8.8□□□□□ -1
Gm28047Q3US59 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC8.8□□□□□ -1
Gm28047Q3US59 Gm18547-201ENSMUST00000192439 811 ntBASIC8.8□□□□□ -1
Gm28047Q3US59 Gm38306-201ENSMUST00000193954 237 ntBASIC8.8□□□□□ -1
Gm28047Q3US59 Gm40304-201ENSMUST00000202154 268 ntTSL 3 BASIC8.8□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms