Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 AC114002.1-201ENSMUST00000218097 2409 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Col8a1Q00780 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Col8a1Q00780 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
Col8a1Q00780 AC156273.1-201ENSMUST00000214570 2762 ntTSL 5 BASIC6.82□□□□□ -1.32
Col8a1Q00780 Olfr117-202ENSMUST00000213638 3183 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Col8a1Q00780 Fam214a-201ENSMUST00000081746 3795 ntAPPRIS P4 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col8a1Q00780 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col8a1Q00780 Cd84-204ENSMUST00000136479 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col8a1Q00780 Kbtbd3-202ENSMUST00000212221 2313 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col8a1Q00780 Ldb2-207ENSMUST00000199534 2541 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Col8a1Q00780 Supt7l-204ENSMUST00000201769 2548 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col8a1Q00780 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC6.82□□□□□ -1.32
Col8a1Q00780 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC6.82□□□□□ -1.32
Col8a1Q00780 Ttc30a1-201ENSMUST00000099994 3721 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Col8a1Q00780 Cntrl-203ENSMUST00000113032 7085 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col8a1Q00780 Fmnl1-203ENSMUST00000107027 3693 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Col8a1Q00780 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Col8a1Q00780 Ccser1-201ENSMUST00000045522 2688 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col8a1Q00780 Tnf-202ENSMUST00000167924 1462 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Col8a1Q00780 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Col8a1Q00780 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC6.82□□□□□ -1.32
Col8a1Q00780 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Col8a1Q00780 Hmgn2-ps1-201ENSMUST00000120716 279 ntBASIC6.82□□□□□ -1.32
Col8a1Q00780 Mgst1-207ENSMUST00000140932 742 ntTSL 3 BASIC6.82□□□□□ -1.32
Col8a1Q00780 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Col8a1Q00780 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC6.82□□□□□ -1.32
Col8a1Q00780 Gm24748-201ENSMUST00000157836 108 ntBASIC6.82□□□□□ -1.32
Col8a1Q00780 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC6.82□□□□□ -1.32
Col8a1Q00780 Gm10182-201ENSMUST00000178676 273 ntBASIC6.82□□□□□ -1.32
Col8a1Q00780 Gm26800-201ENSMUST00000180871 349 ntTSL 3 BASIC6.82□□□□□ -1.32
Col8a1Q00780 Calm5-201ENSMUST00000183198 589 ntBASIC6.82□□□□□ -1.32
Col8a1Q00780 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC6.82□□□□□ -1.32
Col8a1Q00780 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC6.82□□□□□ -1.32
Col8a1Q00780 Gm28869-201ENSMUST00000187199 811 ntTSL 3 BASIC6.82□□□□□ -1.32
Col8a1Q00780 Gm37934-201ENSMUST00000192902 402 ntBASIC6.82□□□□□ -1.32
Col8a1Q00780 Mir7230-201ENSMUST00000195977 56 ntBASIC6.82□□□□□ -1.32
Col8a1Q00780 Gm4873-201ENSMUST00000199402 1203 ntBASIC6.82□□□□□ -1.32
Col8a1Q00780 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col8a1Q00780 Gm43846-201ENSMUST00000200502 932 ntBASIC6.82□□□□□ -1.32
Col8a1Q00780 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC6.82□□□□□ -1.32
Col8a1Q00780 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC6.82□□□□□ -1.32
Col8a1Q00780 Gm44931-201ENSMUST00000206056 545 ntBASIC6.82□□□□□ -1.32
Col8a1Q00780 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC6.82□□□□□ -1.32
Col8a1Q00780 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC6.82□□□□□ -1.32
Col8a1Q00780 Gm44954-201ENSMUST00000208513 227 ntBASIC6.82□□□□□ -1.32
Col8a1Q00780 AC120002.1-201ENSMUST00000218456 331 ntBASIC6.82□□□□□ -1.32
Col8a1Q00780 AC132304.1-201ENSMUST00000218860 135 ntBASIC6.82□□□□□ -1.32
Col8a1Q00780 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC6.82□□□□□ -1.32
Col8a1Q00780 Gm31711-201ENSMUST00000220687 196 ntBASIC6.82□□□□□ -1.32
Col8a1Q00780 Gm7986-201ENSMUST00000221336 551 ntBASIC6.82□□□□□ -1.32
Col8a1Q00780 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC6.82□□□□□ -1.32
Col8a1Q00780 AC131033.1-201ENSMUST00000228223 279 ntBASIC6.82□□□□□ -1.32
Col8a1Q00780 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Col8a1Q00780 Olfr1333-201ENSMUST00000076019 954 ntAPPRIS P2 BASIC6.82□□□□□ -1.32
Col8a1Q00780 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Col8a1Q00780 Lhfpl2-202ENSMUST00000118195 3611 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col8a1Q00780 Olfr1212-202ENSMUST00000215781 3636 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Col8a1Q00780 Slfn5-202ENSMUST00000108157 3007 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col8a1Q00780 Etfdh-202ENSMUST00000120992 2233 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Col8a1Q00780 Gm42848-201ENSMUST00000201477 2022 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Col8a1Q00780 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Col8a1Q00780 Ttc16-201ENSMUST00000066478 2979 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col8a1Q00780 Ppfia2-203ENSMUST00000217854 8885 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col8a1Q00780 Fmo5-202ENSMUST00000107049 2583 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col8a1Q00780 AC154634.1-201ENSMUST00000225225 2394 ntBASIC6.82□□□□□ -1.32
Col8a1Q00780 Hp1bp3-203ENSMUST00000105825 4618 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Col8a1Q00780 Zfp946-202ENSMUST00000120222 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col8a1Q00780 Tpx2-202ENSMUST00000109816 3483 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col8a1Q00780 Ncor1-205ENSMUST00000101067 7243 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Col8a1Q00780 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col8a1Q00780 Vmn2r-ps99-202ENSMUST00000223517 2338 ntBASIC6.82□□□□□ -1.32
Col8a1Q00780 Unc45b-202ENSMUST00000108160 4152 ntAPPRIS ALT1 TSL 5 BASIC6.82□□□□□ -1.32
Col8a1Q00780 Faf2-203ENSMUST00000126071 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col8a1Q00780 Prc1-210ENSMUST00000174172 3008 ntTSL 5 BASIC6.82□□□□□ -1.32
Col8a1Q00780 Rmi1-205ENSMUST00000225828 3594 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Col8a1Q00780 Ms4a13-201ENSMUST00000073380 1375 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col8a1Q00780 Ces3a-202ENSMUST00000093223 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Col8a1Q00780 Calhm2-202ENSMUST00000140512 3377 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Col8a1Q00780 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col8a1Q00780 Gm43292-201ENSMUST00000199580 2449 ntBASIC6.81□□□□□ -1.32
Col8a1Q00780 Tbc1d14-201ENSMUST00000031094 4590 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col8a1Q00780 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
Col8a1Q00780 Slc29a3-202ENSMUST00000119595 3123 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Col8a1Q00780 CT010453.1-201ENSMUST00000226795 2201 ntBASIC6.81□□□□□ -1.32
Col8a1Q00780 Tdrd1-201ENSMUST00000078723 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col8a1Q00780 Acad11-207ENSMUST00000189998 2030 ntTSL 5 BASIC6.81□□□□□ -1.32
Col8a1Q00780 Gm37968-201ENSMUST00000195131 3201 ntBASIC6.81□□□□□ -1.32
Col8a1Q00780 Gm28229-201ENSMUST00000188747 2153 ntBASIC6.81□□□□□ -1.32
Col8a1Q00780 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col8a1Q00780 Enpp4-202ENSMUST00000143137 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col8a1Q00780 AC132392.1-202ENSMUST00000216652 2681 ntAPPRIS P5 TSL 5 BASIC6.81□□□□□ -1.32
Col8a1Q00780 4921509C19Rik-201ENSMUST00000080132 2684 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col8a1Q00780 Pcdh12-201ENSMUST00000025311 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Col8a1Q00780 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
Col8a1Q00780 Zfp82-203ENSMUST00000182546 1964 ntAPPRIS ALT2 TSL 3 BASIC6.81□□□□□ -1.32
Col8a1Q00780 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Col8a1Q00780 Mir503-201ENSMUST00000102168 71 ntBASIC6.81□□□□□ -1.32
Col8a1Q00780 Trav9n-4-201ENSMUST00000103626 595 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Col8a1Q00780 Gm25760-201ENSMUST00000103989 132 ntBASIC6.81□□□□□ -1.32
Col8a1Q00780 0610037L13Rik-204ENSMUST00000106727 926 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms